Methane production from hydrocarbons by consortia dominated by ANME archaea DOI Open Access
Natalie Sarno,

Andrew Montgomery,

Guangchao Zhuang

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Окт. 30, 2024

Understanding microbial production and consumption of methane, a potent greenhouse gas in the atmosphere, is critical for bridging knowledge gaps global carbon cycling. In anoxic environments, methane known to be produced through hydrogenotrophic, acetoclastic or methylotrophic mechanisms. Methane from hydrocarbons may also important, especially hydrocarbon-rich like Gulf California, but mechanism this hydrocarbonoclastic methanogenesis remains unclear. The activity consortia anaerobic oxidizing (ANME) archaea bacteria limits release atmosphere by consuming environments globally. Here we used isotopic-labeling track conversion (hexadecane naphthalene) enrichments hydrothermally impacted, sediments California. was directly hexadecane naphthalene, both presence absence sulfate. We reconstructed metagenomic assembled-genomes (MAGs) these experiments which revealed mixture dominated Desulfobacteriota Bacteroidota, Aeinigmarchaeota, Thermoplasmatota, ANME group 2c. ANME-2c were only MAGs that encoded methyl coenzyme M reductases (McrA) complete Wood-Ljungdahl pathways (WLP). This suggests involved along seafloor, our understanding roles globally important microbes not yet fully appreciated.

Язык: Английский

Biodegradation Potential of Microorganisms in Hydrocarbon-Polluted Baltic Sea Sediments DOI
Rafael Picazo-Espinosa,

Donata Overlingė,

Eglė Mineikė

и другие.

Опубликована: Янв. 1, 2025

The spill of crude oil and petroleum derivatives comprises the majority oceans pollution leads to acute chronic damages exposed organisms coastal communities. Some bacteria fungi are able biodegrade hydrocarbons both in terrestrial aquatic environments. Sediments taken from Baltic Sea vicinity one terminal, Curonian Lagoon strait with high anthropogenic shipping pressure a source microorganisms having potential degrade products. Next generation sequencing (NGS) identified taxa (e.g. Thalassolituus, Exiguobacterium) were indicative consistent presence sediments. Through enrichment sediments samples oil, marine diesel lubricating line NGS study results, we isolate several strains oil-degrading belonging genera Pseudomonas Priestia, members family Lysobacteriaceae; as well Dipodoscaceae, Dipodoscales incertae sedis, Yarrowia, Cyberlindnera, Geotrichum, Pichia, Candida Fusarium. results suggest that bacterial fungal communities present demonstrate significant for bioremediation other pollutants.

Язык: Английский

Процитировано

1

Broad-spectrum hydrocarbon-degrading microbes in the global ocean metagenomes DOI
Qing Liu, Yongyi Peng,

Jing Liao

и другие.

The Science of The Total Environment, Год журнала: 2024, Номер 926, С. 171746 - 171746

Опубликована: Март 21, 2024

Язык: Английский

Процитировано

5

Characterization and identification of long-chain hydrocarbon-degrading bacterial communities in long-term chronically polluted soil in Ogoniland: an integrated approach using culture-dependent and independent methods DOI Creative Commons

Amara Ukamaka Okoye,

Ramganesh Selvarajan, Chioma Blaise Chikere

и другие.

Environmental Science and Pollution Research, Год журнала: 2024, Номер 31(21), С. 30867 - 30885

Опубликована: Апрель 15, 2024

Escalating oil consumption has resulted in an increase accidental spills of petroleum hydrocarbons, causing severe environmental degradation, notably vulnerable regions like the Niger Delta. Complex mixture these hydrocarbons particularly long-chain alkanes presents unique challenges restoration polluted environment due to their chemical properties. This study aimed investigate hydrocarbon-degrading bacterial communities within long-term chronically soil Ogoniland, by utilizing both traditional cultivation methods and modern culture-independent techniques. Results revealed that surface-polluted (SPS) subsurface (SPSS) exhibit significantly higher total organic carbon (TOC) ranging from 5.64 5.06% (TPH) levels 36,775 ppm 14,087 ppm, compared unpolluted (UPS) with 1.97% TOC 479 TPH, respectively. Analysis chain lengths reveals prevalence longer-chain (C20-28) surface soil. Culture-dependent methods, crude enrichment (COE) paraffin wax (PWE), yield 47 isolates subjected a alkane degradation assay. Twelve strains demonstrate significant abilities across all enriched media. Three members, namely Pseudomonas sp. (almA), Marinomonas Alteromonas (ladA), genes responsible for demonstrating efficiency between 50 80%. Culture-independent analysis SPS samples greater species richness diversity SPSS samples. Proteobacteria dominates as phylum sample types, 22.23 82.61%, Firmicutes (0.2-2.22%), Actinobacteria (0.4-3.02%), Acidobacteria (0.1-3.53%) also prevalent. Bacterial profiles at genus level distinct variations among populations comprising number hydrocarbon degraders functional predictions highlight presence potential catabolic (nahAa, adh2, cpnA) However, culture-dependent only captured few dominant members found analysis, implying more specialized media or environments are needed isolate members. The findings this contribute valuable information ecological biotechnological aspects, aiding development effective bioremediation applications restoring oil-contaminated environments.

Язык: Английский

Процитировано

4

Toxicity of Soot Against Microorganisms Isolated from Artisanal Crude Oil Refining Sites in the Niger Delta DOI Creative Commons

D. B. Onwuna,

H. O. Stanley,

Gideon O. Abu

и другие.

Deleted Journal, Год журнала: 2024, Номер 2(2), С. 166 - 173

Опубликована: Март 25, 2024

Background and Objective: Soot is a mass of impure carbon, considered to be an airborne contaminant in areas where artisanal crude oil refining takes place.This study aimed isolate microorganisms from soot-contaminated plants, water soil samples within the vicinity operations Tombia Kingdom, Rivers State, Nigeria.Materials Methods: Isolates were identified using molecular technique, by comparing their 16S rRNA ITS genes with previously NCBI data.A biotoxicity assay was conducted determine effect different concentrations (1,10,100, 1000 mg/L) soot against selected isolates.Microbial growth monitored for 24, 48, 72 96 hrs.Results: Mean heavy metals ranged 1.29±1.80-25.09±32.51mg/kg during wet season 8.52±0.20-80.51±0.61mg/kg dry season.The isolates used closely matched six bacteria, Enterobacter asburiae (61.6%),Pantoea dispersa (100%), Kocuria rhizophila (98%), Bacillus cereus (98.8%),Bacillus subtilis bugandensis (100%) one fungus Exophiala dermatitidis (100%).All able grow presence high soot, hrs.Conclusion: Functional hydrocarbon degradation (alkB PAH) detected some isolates.The showed tolerance could useful bioremediation polluted soil.

Язык: Английский

Процитировано

0

Beyond methane, new frontiers in anaerobic microbial hydrocarbon utilizing pathways DOI Creative Commons
Natalie Sarno, Emily Hyde, Valerie De Anda

и другие.

Microbial Biotechnology, Год журнала: 2024, Номер 17(6)

Опубликована: Июнь 1, 2024

Alkanes, single carbon methane to long-chain hydrocarbons (e.g. hexadecane and tetradecane), are important sources anaerobic microbial communities. In anoxic environments, archaea known utilize produce via the methyl-coenzyme M reductase enzyme (MCR). Recent explorations of new like deep sea sediments, that have coupled metagenomics cultivation experiments revealed divergent MCRs, also referred as alkyl-coenzyme reductases (ACRs) in archaea, with similar mechanisms C

Язык: Английский

Процитировано

0

Methane production from hydrocarbons by consortia dominated by ANME archaea DOI Open Access
Natalie Sarno,

Andrew Montgomery,

Guangchao Zhuang

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Окт. 30, 2024

Understanding microbial production and consumption of methane, a potent greenhouse gas in the atmosphere, is critical for bridging knowledge gaps global carbon cycling. In anoxic environments, methane known to be produced through hydrogenotrophic, acetoclastic or methylotrophic mechanisms. Methane from hydrocarbons may also important, especially hydrocarbon-rich like Gulf California, but mechanism this hydrocarbonoclastic methanogenesis remains unclear. The activity consortia anaerobic oxidizing (ANME) archaea bacteria limits release atmosphere by consuming environments globally. Here we used isotopic-labeling track conversion (hexadecane naphthalene) enrichments hydrothermally impacted, sediments California. was directly hexadecane naphthalene, both presence absence sulfate. We reconstructed metagenomic assembled-genomes (MAGs) these experiments which revealed mixture dominated Desulfobacteriota Bacteroidota, Aeinigmarchaeota, Thermoplasmatota, ANME group 2c. ANME-2c were only MAGs that encoded methyl coenzyme M reductases (McrA) complete Wood-Ljungdahl pathways (WLP). This suggests involved along seafloor, our understanding roles globally important microbes not yet fully appreciated.

Язык: Английский

Процитировано

0