bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Май 29, 2025
Abstract
We
previously
identified
a
signature
of
16
serum
proteins
that
highlighted
role
the
e2
allele
APOE
in
lipid
regulation
via
apolipoprotein
B
(APOB)
and
E
(APOE),
inflammation.
The
were
profiled
using
aptamer-based
Somalogic
technology.
Here,
we
validate
expand
protein
combination
mass-spectrometry,
ELISA,
Luminex,
antibody-based
Olink
proteomics,
blood
transcriptomics.
replicate
association
between
APOB
APOE,
correct
pattern
genotypes
level
detect
new
associations
complex
apolipoproteins
APOC1,
APOC4,
APOC2,
APOC3,
APOF
APOL1.
In
addition,
discover
13
correlate
with
genotypes.
This
extended
includes
granule
CAMP,
CTSG,
DEFA3,
MPO
secreted
from
neutrophils
points
to
olfactomedin
4
(OLFM4)
as
target
for
prevention
Alzheimer’s
disease.
Metabolites,
Год журнала:
2023,
Номер
13(2), С. 253 - 253
Опубликована: Фев. 9, 2023
Alterations
affecting
high-density
lipoproteins
(HDLs)
are
one
of
the
various
abnormalities
observed
in
dyslipidemia
type
2
diabetes
mellitus
(T2DM)
and
obesity.
Kinetic
studies
have
demonstrated
that
catabolism
HDL
particles
is
accelerated.
Both
size
lipidome
proteome
significantly
modified,
which
likely
contributes
to
some
functional
defects
HDLs.
Studies
on
cholesterol
efflux
capacity
yielded
heterogeneous
results,
ranging
from
a
defect
an
improvement.
Several
indicate
HDLs
less
able
inhibit
nuclear
factor
kappa-B
(NF-κB)
proinflammatory
pathway,
subsequently,
adhesion
monocytes
endothelium
their
recruitment
into
subendothelial
space.
In
addition,
antioxidative
function
diminished,
thus
facilitating
deleterious
effects
oxidized
low-density
vasculature.
Lastly,
HDL-induced
activation
endothelial
nitric
oxide
synthase
effective
T2DM
metabolic
syndrome,
contributing
several
defects,
such
as
impaired
promote
vasodilatation
repair,
difficulty
counteracting
production
reactive
oxygen
species
inflammation.
Cardiovascular Diabetology,
Год журнала:
2024,
Номер
23(1)
Опубликована: Янв. 9, 2024
Abstract
Atherosclerosis
is
one
of
the
leading
causes
death
worldwide.
miR-26
a
potential
biomarker
atherosclerosis.
Standardized
diagnostic
tests
for
(MIR26-DX)
have
been
developed,
but
fastest
progress
has
in
predicting
efficacy
IFN-α
therapy
hepatocellular
carcinoma
(HCC,
phase
3).
MiR-26
slows
atherosclerosis
development
by
suppressing
ACC1/2,
ACLY,
ACSL3/4,
ALDH3A2,
ALPL,
BMP2,
CD36,
COL1A1,
CPT1A,
CTGF,
DGAT2,
EHHADH,
FAS,
FBP1,
GATA4,
GSK3β,
G6PC,
Gys2,
HMGA1,
HMGB1,
LDLR,
LIPC,
IL-1β,
IL-6,
JAG2,
KCNJ2,
MALT1,
β-MHC,
NF-κB,
PCK1,
PLCβ1,
PYGL,
RUNX2,
SCD1,
SMAD1/4/5/7,
SREBF1,
TAB3,
TAK1,
TCF7L2,
and
TNF-α
expression.
Many
agents
targeting
these
genes,
such
as
ACC1/2
inhibitors
GS-0976,
PF-05221304,
MK-4074;
DGAT2
IONIS-DGAT2Rx,
PF-06427878,
PF-0685571,
PF-07202954;
COL1A1
inhibitor
HT-100;
stimulants
68
Ga-CBP8
RCT-01;
CPT1A
etomoxir,
perhexiline,
teglicar;
FBP1
CS-917
MB07803;
SMAD7
mongersen,
investigated
clinical
trials.
Interestingly,
better
reduced
intima-media
thickness
(IMT)
than
PCSK9
or
CT-1
knockout.
inhibitors,
including
alirocumab,
evolocumab,
inclisiran,
AZD8233,
Civi-007,
MK-0616,
LIB003,
Recombinant
was
also
Therefore,
promising
target
agent
development.
promotes
foam
cell
formation
reducing
ABCA1
ARL4C
Multiple
materials
can
be
used
to
deliver
miR-26,
it
unclear
which
material
most
suitable
mass
production
applications.
This
review
focuses
on
use
treating
support
it.
Around
40%
of
the
US
population
and
1
in
6
individuals
worldwide
have
obesity,
with
incidence
surging
globally1,2.
Various
dietary
interventions,
including
carbohydrate,
fat
and,
more
recently,
amino
acid
restriction,
been
explored
to
combat
this
epidemic3-6.
Here
we
investigated
impact
removing
individual
acids
on
weight
profiles
mice.
We
show
that
conditional
cysteine
restriction
resulted
most
substantial
loss
when
compared
essential
amounting
30%
within
week,
which
was
readily
reversed.
found
deficiency
activated
integrated
stress
response
oxidative
response,
amplify
each
other,
leading
induction
GDF15
FGF21,
partly
explaining
phenotype7-9.
Notably,
observed
lower
levels
tissue
coenzyme
A
(CoA),
has
considered
be
extremely
stable10,
resulting
reduced
mitochondrial
functionality
metabolic
rewiring.
This
results
energetically
inefficient
anaerobic
glycolysis
defective
tricarboxylic
cycle,
sustained
urinary
excretion
pyruvate,
orotate,
citrate,
α-ketoglutarate,
nitrogen-rich
compounds
acids.
In
summary,
our
investigation
reveals
by
depleting
GSH
CoA,
exerts
a
maximal
loss,
metabolism
signalling
other
restrictions.
These
findings
suggest
strategies
for
addressing
range
diseases
growing
obesity
crisis.
Arteriosclerosis Thrombosis and Vascular Biology,
Год журнала:
2023,
Номер
43(7), С. 1124 - 1133
Опубликована: Май 25, 2023
APOA1
and
APOB
are
the
structural
proteins
of
high-density
lipoprotein
APOB-containing
lipoproteins,
such
as
low-density
very
lipoprotein,
respectively.
The
4
smaller
APOCs
(APOC1,
APOC2,
APOC3,
APOC4)
exchangeable
apolipoproteins;
they
readily
transferred
among
lipoproteins
lipoproteins.
regulate
plasma
triglyceride
cholesterol
levels
by
modulating
substrate
availability
activities
enzymes
interacting
with
interfering
uptake
through
hepatic
receptors.
Of
APOCs,
APOC3
has
been
best
studied
in
relation
to
diabetes.
Elevated
serum
predict
incident
cardiovascular
disease
progression
kidney
people
type
1
Insulin
suppresses
levels,
accordingly,
elevated
associate
insulin
deficiency
resistance.
Mechanistic
studies
a
mouse
model
diabetes
have
demonstrated
that
acts
causal
pathway
diabetes-accelerated
atherosclerosis.
mechanism
is
likely
due
ability
slow
clearance
triglyceride-rich
their
remnants,
thereby
causing
an
increased
accumulation
atherogenic
remnants
lesions
Less
known
about
roles
APOC1,
APOC4
Abstract
Background
Recent
studies
have
demonstrated
that
APOC1
is
associated
with
cancer
progression,
exerting
cancer-promoting
and
immune
infiltration-promoting
effects.
Nevertheless,
there
currently
no
report
on
the
presence
of
in
ovarian
(OV).
Method
In
this
study,
we
conducted
data
analysis
using
GEO
TCGA
databases.
We
a
thorough
bioinformatics
to
investigate
function
OV,
utilizing
various
platforms
including
cBioPortal,
STRING,
GeneMANIA,
LinkedOmics,
GSCALite,
TIMER,
CellMarker.
Additionally,
performed
immunohistochemical
staining
tissue
microarrays
vitro
cellular
assays
validate
our
findings.
Result
Our
findings
reveal
expression
significantly
upregulated
OV
compared
normal
tissues.
Importantly,
patients
high
levels
show
poorer
prognosis.
Furthermore,
study
exerted
crucial
promoting
capacity
cells
proliferate,
migrate,
invade.
identified
genes
co-expressed
are
primarily
adaptive
responses.
Notably,
exhibit
correlation
M2
Tumor-associated
Macrophages
(TAMs).
Conclusion
emerges
as
promising
prognostic
biomarker
for
exhibits
significant
association
TAMs
OV.
Circulation Research,
Год журнала:
2024,
Номер
135(1), С. 6 - 25
Опубликована: Май 15, 2024
Coronary
artery
disease
(CAD),
the
leading
cause
of
death
worldwide,
is
influenced
by
both
environmental
and
genetic
factors.
Although
over
250
risk
loci
have
been
identified
through
genome-wide
association
studies,
specific
causal
variants
their
regulatory
mechanisms
are
still
largely
unknown,
particularly
in
disease-relevant
cell
types
such
as
macrophages.
Nature Communications,
Год журнала:
2025,
Номер
16(1)
Опубликована: Янв. 8, 2025
Aging
increases
the
risk
for
Alzheimer's
disease
(AD),
driving
pathological
changes
like
amyloid-β
(Aβ)
buildup,
inflammation,
and
oxidative
stress,
especially
in
prefrontal
cortex
(PFC).
We
present
first
subcellular-resolution
spatial
transcriptome
atlas
of
human
(PFC),
generated
with
Stereo-seq
from
six
male
AD
cases
at
varying
neuropathological
stages
age-matched
controls.
Our
analyses
revealed
distinct
transcriptional
alterations
across
PFC
layers,
highlighted
disruptions
laminar
structure,
exposed
AD-related
shifts
layer-to-layer
cell-cell
interactions.
Notably,
we
identified
genes
highly
upregulated
stressed
neurons
nearby
glial
cells,
where
diminished
stress-response
interactions
that
promote
Aβ
clearance.
Further,
cell-type-specific
co-expression
analysis
three
neuronal
modules
linked
to
neuroprotection,
protein
dephosphorylation,
regulation,
all
downregulated
as
progresses.
ZNF460
a
transcription
factor
regulating
these
modules,
offering
potential
therapeutic
target.
In
summary,
this
provides
valuable
insight
into
AD's
molecular
mechanisms.
(AD).
Here,
authors
AD,
revealing
alterations.
Nutrition & Metabolism,
Год журнала:
2024,
Номер
21(1)
Опубликована: Фев. 1, 2024
Abstract
Background
Apolipoproteins
have
been
recently
proposed
as
novel
markers
of
cardiovascular
disease
(CVD)
risk.
However,
evidence
regarding
effects
diet
on
apolipoproteins
is
limited.
Aim
To
compare
the
Mediterranean
(MD)
and
lacto-ovo
vegetarian
(VD)
traditional
CVD
risk
factors
in
participants
with
low-to-moderate
Methods
Fifty-two
(39
women;
49.1
±
12.4
years),
followed
MD
VD
for
3
months
each.
Medical
dietary
information
was
collected
at
baseline.
Anthropometric
parameters
blood
samples
were
obtained
beginning
end
interventions.
Results
resulted
significant
improvement
anthropometric
lipid
profiles.
Both
diets
led
to
a
reduction
most
inflammatory
parameters.
As
apolipoproteins,
change
observed
ApoC-I
after
(+
24.4%;
p
=
0.020).
negative
correlation
between
ApoC-III
carbohydrates
(R
−
0.29;
0.039)
whereas
ApoD
saturated
fats
0.38;
0.006).
A
positive
emerged
HDL
0.33;
0.017)
plasma
triglycerides
0.32;
0.020)
0.30;
0.031).
IL-17
be
positively
correlated
ApoB
0.31;
0.028)
0.019).
Subgroup
analysis
revealed
from
both
diets,
especially
women,
individuals
older
than
50
years-old
or
<
factors.
Conclusions
seem
improve
risk,
however,
showed
greater
effect
some
subgroups,
thus
suggesting
how
may
influence
new
potential
Trial
registration
:
registered
clinicaltrials.gov
(identifier:
NCT02641834)
December
2015.
BioFactors,
Год журнала:
2024,
Номер
50(5), С. 922 - 956
Опубликована: Апрель 25, 2024
Abstract
High‐density
lipoproteins
(HDLs)
play
a
vital
role
in
lipid
metabolism
and
cardiovascular
health,
as
they
are
intricately
involved
cholesterol
transport
inflammation
modulation.
The
proteome
of
HDL
particles
is
indeed
complex
distinct
from
other
components
the
bloodstream.
Proteomics
studies
have
identified
nearly
285
different
proteins
associated
with
HDL;
however,
this
review
focuses
more
on
15
or
so
traditionally
named
“apo”
lipoproteins.
Important
metabolizing
enzymes
closely
working
apolipoproteins
also
discussed.
Apolipoproteins
stand
out
for
their
integral
stability,
structure,
function,
metabolism.
unique
structure
functions
each
apolipoprotein
influence
important
processes
such
regulation
These
interactions
shape
stability
performance
particles.
HDLs
multifaceted
roles
beyond
diseases
(CVDs)
various
physiological
disease
states.
Therefore,
detailed
exploration
these
can
offer
valuable
insights
into
potential
diagnostic
markers
therapeutic
targets.
This
comprehensive
article
aims
to
provide
an
in‐depth
understanding
apolipoproteins,
highlighting
structures,
functions,
contributions
processes.
Exploiting
knowledge
holds
great
improving
enhancing
efflux,
modulating
inflammatory
processes,
ultimately
benefiting
individuals
by
limiting
risks
CVDs
inflammation‐based
pathologies.
Understanding
nature
all
expands
our
metabolism,
sheds
light
pathological
implications,
paves
way
advancements
diagnosis,
prevention,
treatment
inflammatory‐related
disorders.
Clinical Proteomics,
Год журнала:
2024,
Номер
21(1)
Опубликована: Март 1, 2024
In
persons
with
dyslipidemia,
a
high
residual
risk
of
cardiovascular
disease
remains
despite
lipid
lowering
therapy.
Current
prediction
mainly
focuses
on
low-density
lipoprotein
cholesterol
(LDL-c)
levels,
neglecting
other
contributing
factors.
Moreover,
the
efficacy
LDL-c
by
statins
resulting
in
reduced
is
only
partially
effective.
Secondly,
from
metrological
viewpoint
falls
short
as
reliable
measurand.
Both
direct
and
calculated
tests
produce
inaccurate
test
results
at
low
end
under
aggressive
As
underperform
both
clinically
metrologically,
there
an
urging
need
for
molecularly
defined
biomarkers.
Over
years,
apolipoproteins
have
emerged
promising
biomarkers
context
they
are
functional
workhorses
metabolism.
Among
these,
apolipoprotein
B
(ApoB),
present
all
atherogenic
particles,
has
demonstrated
to
outperform
LDL-c.
Other
apolipoproteins,
such
Apo(a)
-
characteristic
emerging
factor
lipoprotein(a)
-,
ApoC-III
inhibitor
triglyceride-rich
clearance
attracted
attention
well.
To
support
personalized
medicine,
we
move
markers,
like
apolipoproteins.
Molecularly
diagnosis
targeted
therapy
require
measured
This
review
provides
summary
scientific
validity
(patho)physiological
role
nine
serum
Apo(a),
ApoB,
ApoC-I,
ApoC-II,
ApoC-III,
ApoE
its
phenotypes,
ApoA-I,
ApoA-II,
ApoA-IV,
metabolism,
their
association
disease,
potential
markers
when
multiplex
panel.