Frontiers in Plant Science,
Год журнала:
2020,
Номер
11
Опубликована: Дек. 4, 2020
The
genera
Arnebia
and
Lithospermum
(Lithospermeae-Boraginaceae)
comprise
25–30
50–60
species,
respectively.
Some
of
them
are
economically
valuable,
as
their
roots
frequently
contain
a
purple-red
dye
used
in
the
cosmetic
industry.
Furthermore,
dried
euchroma
,
A.
guttata
erythrorhizon
which
have
been
designated
Lithospermi
Radix,
traditional
Korean
herbal
medicine.
This
study
is
first
report
on
floral
micromorphology
complete
chloroplast
(cp)
genome
sequences
(including
tibetana
),
L.
.
We
reveal
great
diversity
epidermal
cell
patterns,
gynoecium,
structure
trichomes.
cp
genomes
were
149,361–150,465
bp
length,
with
conserved
quadripartite
structures.
In
total,
112
genes
identified,
including
78
protein-coding
regions,
30
tRNA
genes,
four
rRNA
genes.
Gene
order,
content,
orientation
highly
consistent
general
angiosperm
genomes.
Comparison
revealed
locally
divergent
mainly
within
intergenic
spacer
regions
(
atpH-atpI
petN-psbM
rbcL-psaI
ycf4-cemA
ndhF-rpl32
ndhC-trnV-UAC
).
To
facilitate
species
identification,
we
developed
molecular
markers
psaA
-
ycf3
(PSY),
trnI-CAU-
ycf2
(TCY),
ndhC
trnV-UAC
(NCTV)
based
divergence
hotspots.
High-resolution
phylogenetic
analysis
clear
clustering
close
relationship
to
its
sister
group,
was
supported
by
strong
bootstrap
values
posterior
probabilities.
Overall,
gynoecium
characteristics
genetic
distance
suggest
that
might
be
recognized
an
independent
rather
than
synonym
present
morphological
genomic
results
provide
useful
information
for
future
studies,
such
taxonomic,
phylogenetic,
evolutionary
Boraginaceae.
Polyploidization
is
generally
considered
to
be
an
important
evolutionary
driver
affecting
the
genetic
diversity,
that
can
alter
morphology,
phenology,
physiology
or
ecology
of
plants,
which
in
turn
may
make
taxonomy
polyploids
more
difficult.
One
such
example
Plant Diversity,
Год журнала:
2023,
Номер
45(4), С. 409 - 421
Опубликована: Март 15, 2023
The
genus
Trigonotis
comprises
nearly
60
species
mainly
distributed
in
East
and
Southeast
Asia.
China
has
the
largest
number
of
world,
with
a
total
44
species,
which
38
are
endemic.
Nutlet
morphology
is
useful
for
taxonomic
delimitation
Trigonotis.
However,
there
still
controversial
circumscriptions
nutlet
shape
some
species.
In
previous
studies,
interspecies
phylogenetic
relationships
were
inferred
using
few
DNA
markers
very
taxa,
possibly
led
to
erroneous
or
incomplete
conclusions.
this
study,
39
taxa
characteristics
34
complete
chloroplast
genomes
(29
taxa)
investigated
analyzed.
Then,
discussed
within
based
on
genomes.
To
best
our
knowledge,
study
first
comprehensive
analysis
genome
Based
morphology,
can
be
divided
into
two
groups:
Group
1,
hemispherical
oblique
tetrahedron
carpopodiums,
2,
inverted
without
carpopodiums.
exhibited
typical
quadripartite
structure,
including
84-86
protein-coding,
37
transfer
RNA,
8
ribosomal
RNA
genes,
length
147,247-148,986
bp.
Genes
junctions
well
conserved
Trigonotis,
similar
those
other
Boraginaceae
s.str.
Furthermore,
showed
relatively
high
diversity,
more
genic
regions
than
intergenic
regions;
addition,
we
detected
14
hot
spots
(Pi
>
0.005)
non-coding
regions.
Phylogenetic
analyses
data
identified
highly
resolved
between
Specifically,
was
clades
strong
support:
one
clade
included
nutlets
carpopodiums
bracts,
whereas
bracts.
Our
results
may
inform
future
taxonomic,
phylogenetic,
evolutionary
studies
Boraginaceae.
PhytoKeys,
Год журнала:
2024,
Номер
247, С. 155 - 172
Опубликована: Окт. 15, 2024
Cryptantha
whippleae
D.A.York
&
M.G.Simpson
(Boraginaceae)
is
described
as
new.
This
species
currently
known
to
occur
in
serpentine
barrens
the
Shasta-Trinity
National
Forest
of
Siskiyou
County,
California,
with
one
outlier
population
possible
Lake
California.
The
new
most
similar
grandiflora
and
C.
milobakeri
,
these
three
likely
each
others’
closest
relatives.
All
have
a
relatively
large
corolla
limb
width
smooth,
lance-ovate
ovate,
marginally
rounded,
acuminate
abaxially
transversely
flattened
nutlets.
differs
from
having
short,
opposed
tall,
stem
height;
bifurcate
trifurcate
primary
axis
cymules;
typically
2–3
nutlets
per
fruit,
usually
nutlet
fruit.
also
versus
appressed-strigose
spreading-hispid
vestiture,
strigose
only
or
hirsute;
calyx
trichomes
two
distinct
vestiture
types,
appressed
hirsute
medially
hispid,
type,
dense,
ascending,
whitish
sericeous;
rare
joins
seven
other
that
are
found
on
serpentine,
either
obligately
facultatively.
Current
molecular
phylogenetic
studies
support
mostly
convergent
evolution
adaptation
but
additional
needed.
American Journal of Botany,
Год журнала:
2017,
Номер
104(11), С. 1717 - 1728
Опубликована: Ноя. 1, 2017
PREMISE
OF
THE
STUDY:
American
amphitropical
disjunction
(AAD)
is
an
important
but
understudied
New
World
biogeographic
pattern
in
which
related
plants
occur
extratropical
North
America
and
South
America,
are
absent
the
intervening
tropics.
Subtribe
Amsinckiinae
(Boraginaceae)
one
of
richest
groups
displaying
AAD
pattern.
Here,
we
infer
a
time‐calibrated
molecular
phylogeny
group
to
evaluate
number,
timing,
directionality
events,
yields
generalizable
insights
into
mechanism
AAD.
METHODS:
We
perform
phylogenomic
analysis
139
samples
subtribe
divergence
times
using
two
calibration
schemes:
with
only
fossil
calibrations
fossils
plus
secondary
from
recent
family
level
analysis.
Biogeographic
was
performed
R
package
BioGeoBEARS.
KEY
RESULTS:
document
18
examples
Amsinckiinae.
Inferred
these
were
strongly
asynchronous,
ranging
Miocene
(17.1
million
years
ago
[Ma])
Pleistocene
(0.33
Ma),
most
(12)
occurring
<5
Ma.
Four
events
occurred
10–5
Ma,
during
second
rise
Andes.
All
had
directionality.
CONCLUSIONS:
Second
hyperdiverse
Poaceae
number
documented
examples,
ideal
system
for
study
Asynchronous
support
hypothesis
long‐distance
dispersal
by
birds
as
more
generally.
Further
comparative
studies
may
permit
testing
examination
relationship
between
fruit
morphology,
reproductive
biology,
ploidy.
Frontiers in Plant Science,
Год журнала:
2020,
Номер
11
Опубликована: Дек. 4, 2020
The
genera
Arnebia
and
Lithospermum
(Lithospermeae-Boraginaceae)
comprise
25–30
50–60
species,
respectively.
Some
of
them
are
economically
valuable,
as
their
roots
frequently
contain
a
purple-red
dye
used
in
the
cosmetic
industry.
Furthermore,
dried
euchroma
,
A.
guttata
erythrorhizon
which
have
been
designated
Lithospermi
Radix,
traditional
Korean
herbal
medicine.
This
study
is
first
report
on
floral
micromorphology
complete
chloroplast
(cp)
genome
sequences
(including
tibetana
),
L.
.
We
reveal
great
diversity
epidermal
cell
patterns,
gynoecium,
structure
trichomes.
cp
genomes
were
149,361–150,465
bp
length,
with
conserved
quadripartite
structures.
In
total,
112
genes
identified,
including
78
protein-coding
regions,
30
tRNA
genes,
four
rRNA
genes.
Gene
order,
content,
orientation
highly
consistent
general
angiosperm
genomes.
Comparison
revealed
locally
divergent
mainly
within
intergenic
spacer
regions
(
atpH-atpI
petN-psbM
rbcL-psaI
ycf4-cemA
ndhF-rpl32
ndhC-trnV-UAC
).
To
facilitate
species
identification,
we
developed
molecular
markers
psaA
-
ycf3
(PSY),
trnI-CAU-
ycf2
(TCY),
ndhC
trnV-UAC
(NCTV)
based
divergence
hotspots.
High-resolution
phylogenetic
analysis
clear
clustering
close
relationship
to
its
sister
group,
was
supported
by
strong
bootstrap
values
posterior
probabilities.
Overall,
gynoecium
characteristics
genetic
distance
suggest
that
might
be
recognized
an
independent
rather
than
synonym
present
morphological
genomic
results
provide
useful
information
for
future
studies,
such
taxonomic,
phylogenetic,
evolutionary
Boraginaceae.