bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Апрель 23, 2024
Abstract
To
enable
transmission
of
information
in
the
brain,
synaptic
vesicles
fuse
to
presynaptic
membranes,
liberating
their
content
and
exposing
transiently
a
myriad
vesicular
transmembrane
proteins.
However,
versatile
methods
for
quantifying
translocation
endogenous
proteins
during
neuronal
activity
remain
unavailable,
as
fast
dynamics
vesicle
cycling
difficult
specific
isolation
trafficking
such
transient
surface
exposure.
Here
we
developed
novel
approach
using
cleft
proximity
labeling
capture
quantify
activity-driven
at
synapse.
We
show
that
accelerating
biotinylation
times
match
exocytosis
allows
capturing
exposed
neural
activity,
enabling
first
time
study
nearly
every
protein.
As
proof-of-concept,
further
applied
this
technology
obtain
direct
evidence
non-canonical
proteins,
ATG9A
NPTX1,
which
had
been
proposed
traffic
but
proof
not
yet
shown.
The
technological
advancement
presented
here
will
facilitate
future
studies
dissecting
molecular
identity
exocytosed
synapse
helping
define
machinery
sustains
neurotransmission
mammalian
brain.
Significance
statement
Synaptic
is
critical
neurons
communicate
sustain
brain
function.
Pascual-Caro
de
Juan-Sanz
develop
pioneering
method
any
Coordinating
clefts
just
few
seconds,
authors
visualize
This
work
provides
framework
uncover
complex
choreography
events
occurring
within
firing
synapses,
deeper
control
communication
circuit
physiology
Cells,
Год журнала:
2024,
Номер
13(1), С. 103 - 103
Опубликована: Янв. 4, 2024
Autophagy
is
a
major
degradative
pathway
that
plays
key
role
in
sustaining
cell
homeostasis,
integrity,
and
physiological
functions.
Macroautophagy,
which
ensures
the
clearance
of
cytoplasmic
components
engulfed
double-membrane
autophagosome
fuses
with
lysosomes,
orchestrated
by
complex
cascade
events.
has
particularly
strong
impact
on
nervous
system,
mutations
core
cause
numerous
neurological
diseases.
We
first
review
regulation
autophagy,
from
biogenesis
to
lysosomal
degradation
associated
neurodevelopmental/neurodegenerative
disorders.
then
describe
how
this
process
specifically
regulated
axon
somatodendritic
compartment
it
altered
In
particular,
we
present
neuronal
specificities
spatial
control
biogenesis,
close
relationship
maturation
axonal
transport,
synaptic
activity.
Finally,
discuss
functions
autophagy
during
development
adulthood.
Autophagy,
Год журнала:
2024,
Номер
20(11), С. 2373 - 2387
Опубликована: Авг. 4, 2024
Atg9,
the
only
transmembrane
protein
among
many
autophagy-related
proteins,
was
first
identified
in
year
2000
yeast.
Two
homologs
of
ATG9A
and
ATG9B,
have
been
found
mammals.
While
ATG9B
shows
a
tissue-specific
expression
pattern,
such
as
placenta
pituitary
gland,
is
ubiquitously
expressed.
Additionally,
deficiency
leads
to
severe
defects
not
at
molecular
cellular
levels
but
also
organismal
level,
suggesting
key
fundamental
roles
for
ATG9A.
The
subcellular
localization
on
small
vesicles
its
functional
relevance
autophagy
suggested
potential
role
lipid
supply
during
autophagosome
biogenesis.
Nevertheless,
precise
autophagic
process
has
remained
long-standing
mystery,
especially
neurons.
Recent
findings,
however,
including
structural,
proteomic,
biochemical
analyses,
provided
new
insights
into
function
expansion
phagophore
membrane.
In
this
review,
we
aim
understand
various
aspects
ATG9
(in
invertebrates
plants)/ATG9A
mammals),
localization,
trafficking,
other
functions,
nonneuronal
cells
neurons
by
comparing
recent
discoveries
related
ATG9/ATG9A
proposing
directions
future
research.
Frontiers in Cell and Developmental Biology,
Год журнала:
2021,
Номер
9
Опубликована: Дек. 17, 2021
Autophagy
is
an
evolutionary
conserved
catabolic
pathway
essential
for
the
maintenance
of
cellular
homeostasis.
Defective
proteins
and
organelles
are
engulfed
by
autophagosomal
membranes
which
fuse
with
lysosomes
cargo
degradation.
In
neurons,
orchestrated
progression
autophagosome
formation
maturation
occurs
in
distinct
subcellular
compartments.
For
synapses,
distance
from
soma
oxidative
stress
generated
during
intense
neuronal
activity
pose
a
challenge
to
maintain
protein
constitutes
crucial
mechanism
proper
functioning
this
unique
vulnerable
compartment.
We
now
beginning
understand
how
autophagy
regulated
at
pre-synaptic
terminals
pathway,
when
imbalanced,
impacts
on
synaptic
function
-ultimately-
survival.
review
here
current
state
art
“synaptic
autophagy”,
emphasis
biogenesis
autophagosomes
provide
overview
existing
knowledge
signals
inducing
highlight
interplay
between
neurotransmission,
perspectives
future
research.
Neurons
are
long-lived
postmitotic
cells
that
capitalize
on
autophagy
to
remove
toxic
or
defective
proteins
and
organelles
maintain
neurotransmission
the
integrity
of
their
functional
proteome.
Mutations
in
genes
cause
congenital
diseases,
sharing
prominent
brain
dysfunctions
including
epilepsy,
intellectual
disability,
neurodegeneration.
Ablation
core
neurons
glia
disrupts
normal
behavior,
leading
motor
deficits,
memory
impairment,
altered
sociability,
which
associated
with
defects
synapse
maturation,
plasticity,
neurotransmitter
release.
In
spite
importance
for
physiology,
substrates
neuronal
mechanisms
by
affect
synaptic
function
health
disease
remain
controversial.
Here,
we
summarize
current
state
knowledge
autophagy,
address
existing
controversies
inconsistencies
field,
provide
a
roadmap
future
research
role
control
function.
Abstract
Macroautophagy
involves
the
sequestration
of
cytoplasmic
contents
in
a
double-membrane
autophagosome
and
its
subsequent
delivery
to
lysosomes
for
degradation
recycling.
In
Caenorhabditis
elegans,
autophagy
participates
diverse
processes
such
as
stress
resistance,
cell
fate
specification,
tissue
remodeling,
aging,
adaptive
immunity.
Genetic
screens
C.
elegans
have
identified
set
metazoan-specific
genes
that
form
basis
our
molecular
understanding
steps
unique
pathway
multicellular
organisms.
Suppressor
uncovered
multiple
mechanisms
modulate
activity
under
physiological
conditions.
also
provides
model
investigate
how
is
coordinately
controlled
at
an
organismal
level.
this
chapter,
we
will
discuss
machinery,
regulation,
functions
autophagy,
methods
utilized
monitoring
during
development.
Current Opinion in Neurobiology,
Год журнала:
2025,
Номер
93, С. 103054 - 103054
Опубликована: Май 24, 2025
Post-mitotic
and
highly
polarized
neurons
are
dependent
on
the
fitness
of
their
synapses,
which
often
found
a
long
distance
away
from
soma.
How
synaptic
proteome
is
maintained,
dynamically
reshaped,
continuously
turned
over
topic
intense
investigation.
Autophagy,
conserved,
lysosome-mediated
degradation
pathway
has
emerged
as
vital
component
long-term
neuronal
maintenance,
now
more
specifically
homeostasis.
Here,
we
review
most
recent
findings
how
autophagy
undergoes
both
dynamic
local
regulation
at
synapse,
it
contributes
to
pre-
post-synaptic
proteostasis
function.
We
also
discuss
insights
open
questions
that
this
new
evidence
brings.
Frontiers in Synaptic Neuroscience,
Год журнала:
2022,
Номер
14
Опубликована: Март 17, 2022
Brain
synapses
pose
special
challenges
on
the
quality
control
of
their
protein
machineries
as
they
are
far
away
from
neuronal
soma,
display
a
high
potential
for
plastic
adaptation
and
have
energy
demand
to
fulfill
physiological
tasks.
This
applies
in
particular
presynaptic
part
where
neurotransmitter
is
released
synaptic
vesicles,
which
turn
be
recycled
refilled
complex
membrane
trafficking
cycle.
Pathways
remove
outdated
damaged
proteins
include
ubiquitin-proteasome
system
acting
cytoplasm
well
membrane-associated
endolysosomal
autophagy
systems.
Here
we
focus
latter
systems
review
what
known
about
spatial
organization
endolysomal
processes
within
presynapse.
We
provide
an
inventory
components
these
degradative
were
found
present
boutons
might
anchored
apparatus.
identify
three
structures
reported
interact
with
constituents
membrane-based
protein-degradation
pathways
therefore
may
serve
docking
stations.
These
(i)
scaffolding
cytomatrix
at
active
zone,
such
Bassoon
or
Clarinet,
(ii)
endocytic
machinery
localized
mainly
peri-active
(iii)
vesicles.
Finally,
sketch
scenarios,
how
autophagic
cargos
tagged
recruited
cellular
mechanisms
govern
turnover
Acta Physiologica,
Год журнала:
2024,
Номер
240(8)
Опубликована: Июнь 5, 2024
Abstract
Aim
Understanding
the
physiological
role
of
ATP6V1A,
a
component
cytosolic
V
1
domain
proton
pump
vacuolar
ATPase,
in
regulating
neuronal
development
and
function.
Methods
Modeling
loss
function
Atp6v1a
primary
murine
hippocampal
neurons
studying
morphology
by
immunoimaging,
electrophysiological
recordings
electron
microscopy.
Results
depletion
affects
neurite
elongation,
stabilization,
excitatory
synapses
prevents
synaptic
rearrangement
upon
induction
plasticity.
These
phenotypes
are
due
to
an
overall
decreased
expression
subunits,
that
leads
impairment
lysosomal
pH‐regulation
autophagy
progression
with
accumulation
aberrant
lysosomes
at
soma
enlarged
vacuoles
boutons.
Conclusions
data
suggest
ATP6V1A
surveillance
integrity
plasticity
highlight
pathophysiological
significance
alteration
is
associated
neurodevelopmental
neurodegenerative
diseases.
The
further
support
pivotal
involvement
flux
maintaining
proper
connectivity
adaptive
properties.
Cellular and Molecular Life Sciences,
Год журнала:
2024,
Номер
81(1)
Опубликована: Окт. 5, 2024
Abstract
Neurons
are
dependent
on
efficient
quality
control
mechanisms
to
maintain
cellular
homeostasis
and
function
due
their
polarization
long-life
span.
Autophagy
is
a
lysosomal
degradative
pathway
that
provides
nutrients
during
starvation
recycles
damaged
and/or
aged
proteins
organelles.
In
neurons,
autophagosomes
constitutively
form
in
distal
axons
at
synapses
trafficked
retrogradely
the
cell
soma
fuse
with
lysosomes
for
cargo
degradation.
How
neuronal
autophagy
organized
controlled
remains
poorly
understood.
Several
presynaptic
endocytic
have
been
shown
regulate
both
synaptic
vesicle
recycling
autophagy.
Here,
by
combining
electron,
fluorescence,
live
imaging
microscopy
biochemical
analysis,
we
show
neuron-specific
protein
APache,
AP-2
interactor,
functions
neurons
as
an
important
player
process,
regulating
retrograde
transport
of
autophagosomes.
We
found
APache
colocalizes
co-traffics
primary
cortical
induction
mTOR
inhibition
increases
LC3
levels
boutons.
silencing
causes
blockade
autophagic
flux
preventing
clearance
p62/SQSTM1,
leading
severe
accumulation
amphisomes
terminals
along
neurites
defective
TrkB-containing
signaling
axons.
Together,
our
data
identify
regulator
cycle,
potentially
cooperation
AP-2,
hypothesize
its
dysfunctions
contribute
early
impairments
neurodegenerative
conditions
associated
impaired