Tissue-specific and cis-regulatory changes underlie parallel, adaptive gene expression evolution in house mice
PLoS Genetics,
Год журнала:
2024,
Номер
20(2), С. e1010892 - e1010892
Опубликована: Фев. 2, 2024
Changes
in
gene
regulation
have
long
been
appreciated
as
a
driving
force
of
adaptive
evolution,
however
the
relative
contributions
cis-
and
trans-
acting
changes
to
over
short
evolutionary
timescales
remain
unclear.
Instances
recent,
parallel
phenotypic
evolution
provide
an
opportunity
assess
whether
patterns
are
seen
at
level
expression,
contribution
cis
-
trans
early
stages
divergence.
Here,
we
studied
expression
liver
brown
adipose
tissue
two
wild-derived
strains
house
mice
that
independently
adapted
cold,
northern
environments,
compared
them
strain
from
warm,
tropical
environment.
To
investigate
regulatory
parents
allele-specific
F1
hybrids
crosses
between
warm-adapted
cold-adapted
strains.
First,
found
different
showed
both
unique
shared
but
proportion
(i.e.
parallelism)
was
greater
than
expected
by
chance.
Second,
discovered
occurred
largely
tissue-specific
-regulated
genes,
these
genes
were
over-represented
cases
evolution.
Finally,
integrated
data
with
scans
for
selection
natural
populations
substantial
parallelism
under
selection.
Furthermore,
outliers
associated
more
chance;
influenced
phenotypes
such
body
size,
immune
functioning,
activity
level.
These
results
demonstrate
cold
environments
driven
-regulatory
changes,
providing
insight
into
mechanisms
earliest
Язык: Английский
Phenotypic and Developmental Dissection of an Instance of the Island Rule
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 24, 2025
Abstract
Organismal
body
weight
correlates
with
morphology,
life
history,
physiology,
and
behavior,
making
it
perhaps
the
most
telling
single
indicator
of
an
organism’s
evolutionary
ecological
profile.
Island
populations
provide
exceptional
opportunity
to
study
evolution.
In
accord
“island
rule,”
insular
small-bodied
vertebrates
often
evolve
larger
sizes,
whereas
large-bodied
smaller
sizes.
To
understand
how
island
extreme
we
adopted
a
developmental
perspective
compared
suite
traits
established
connections
size
in
world’s
largest
wild
house
mice
from
Gough
smaller-bodied
mainland
strain.
We
pinpoint
24-hour
periods
during
third
fifth
week
age
which
gain
exceptionally
more
than
mice.
show
that
accumulate
visceral
fat
beginning
early
postnatal
development.
During
burst
gain,
shift
toward
carbohydrates
away
as
fuel,
despite
being
active
consuming
equivalent
amounts
food
Our
findings
showcase
value
phenotypic
characterization
for
discovering
evolves
context
broader
patterns
trait
Язык: Английский