Frontiers in Ecology and Evolution,
Год журнала:
2022,
Номер
10
Опубликована: Авг. 2, 2022
Animal
specimens
in
natural
history
collections
are
invaluable
resources
examining
the
historical
context
of
pathogen
dynamics
wildlife
and
spillovers
to
humans.
For
example,
may
reveal
new
associations
between
bat
species
coronaviruses.
However,
RNA
viruses
difficult
study
because
protocols
for
extracting
from
these
have
not
been
optimized.
Advances
made
our
ability
recover
nucleic
acids
formalin-fixed
paraffin-embedded
samples
(FFPE)
commonly
used
human
clinical
studies,
yet
other
types
formalin
preserved
received
less
attention.
Here,
we
optimize
recovery
ethanol-preserved
museum
order
improve
usability
surveys
zoonotic
diseases.
We
provide
quality
quantity
measures
replicate
tissues
subsamples
22
five
genera
(
Rhinolophus
,
Hipposideros
Megareops
Cynopterus
Nyctalus
)
collected
China
Myanmar
1886
2003.
As
a
single
specimen
were
variety
ways,
including
(8
bats),
frozen
(13
flash
(2
able
compare
yield
across
different
preservation
methods.
extracted
is
highly
fragmented,
but
usable
short-read
sequencing
targeted
amplification.
Incubation
with
Proteinase-K
following
thorough
homogenization
improves
yield.
This
optimized
protocol
extends
data
that
can
be
derived
existing
facilitates
future
examinations
host
specimens.
JMIR Public Health and Surveillance,
Год журнала:
2023,
Номер
10, С. e49185 - e49185
Опубликована: Дек. 7, 2023
Public
health
surveillance
plays
a
vital
role
in
informing
public
decision-making.
The
onset
of
the
COVID-19
pandemic
early
2020
caused
widespread
shift
priorities.
Global
efforts
focused
on
monitoring
and
contact
tracing.
Existing
programs
were
interrupted
due
to
physical
distancing
measures
reallocation
resources.
intersected
with
advancements
technologies
that
have
potential
support
efforts.
One Health,
Год журнала:
2023,
Номер
16, С. 100484 - 100484
Опубликована: Янв. 18, 2023
The
unprecedented
generation
of
large
volumes
biodiversity
data
is
consistently
contributing
to
a
wide
range
disciplines,
including
disease
ecology.
Emerging
infectious
diseases
are
usually
zoonoses
caused
by
multi-host
pathogens.
Therefore,
their
understanding
may
require
the
access
related
ecology
and
occurrence
species
involved.
Nevertheless,
despite
several
data-mobilization
initiatives,
usage
for
research
into
dynamics
has
not
yet
been
fully
leveraged.
To
explore
current
contribution,
trends,
identify
limitations,
we
characterized
in
scientific
publications
human
health,
contrasting
patterns
studies
citing
Global
Biodiversity
Information
Facility
(GBIF)
with
those
obtaining
from
other
sources.
We
found
that
mainly
obtained
literature
aggregated
or
standardized
Most
explored
pathogen
and,
particularly
GBIF-mediated
data,
tended
reuse
multiple
(>2).
Data
sources
varied
according
taxa
epidemiological
roles
repositories
were
used
hosts,
reservoirs,
vectors,
barely
as
source
pathogens
which
was
animal-health
institutions.
While
both
GBIF-
similar
topics,
they
presented
discipline
biases
different
analytical
approaches.
Research
on
emerging
geographical
ecological
species.
One
Health
challenge
requires
interdisciplinary
collaboration
sharing,
facilitated
platforms.
contribution
understand
should
be
acknowledged,
strengthened,
promoted.
Abstract
Despite
repeated
spillover
transmission
and
their
potential
to
cause
significant
morbidity
mortality
in
human
hosts,
the
New
World
mammarenaviruses
remain
largely
understudied.
These
viruses
are
endemic
South
America,
with
animal
reservoir
hosts
covering
large
geographic
areas
whose
ecology
driven
part
by
land
use
change
agriculture
that
put
humans
regular
contact
zoonotic
hosts.
We
compiled
published
studies
about
Guanarito
virus,
Junin
Machupo
Chapare
Sabia
Lymphocytic
Choriomeningitis
virus
review
state
of
knowledge
viral
hemorrhagic
fevers
caused
mammarenaviruses.
summarize
what
is
known
rodent
reservoirs,
conditions
for
each
these
pathogens,
characteristics
populations
at
greatest
risk
fever
diseases.
also
implications
outbreaks
biosecurity
concerns
where
diseases
endemic,
steps
countries
can
take
strengthen
surveillance
increase
capacity
local
healthcare
systems.
While
there
unique
risks
posed
six
viruses,
ecological
epidemiological
similarities
suggest
common
mitigate
better
contain
future
outbreaks.
Proceedings of the Royal Society B Biological Sciences,
Год журнала:
2023,
Номер
290(2012)
Опубликована: Дек. 6, 2023
The
accelerating
pace
of
emerging
zoonotic
diseases
in
the
twenty-first
century
has
motivated
cross-disciplinary
collaboration
on
One
Health
approaches,
combining
microbiology,
veterinary
and
environmental
sciences,
epidemiology
for
outbreak
prevention
mitigation.
Such
outbreaks
are
often
caused
by
spillovers
attributed
to
human
activities
that
encroach
wildlife
habitats
ecosystems,
such
as
land
use
change,
industrialized
food
production,
urbanization
animal
trade.
While
origin
anthropogenic
effects
ecology
biogeography
can
be
traced
Late
Pleistocene,
archaeological
record—a
long-term
archive
human–animal–environmental
interactions—has
largely
been
untapped
these
thus
limiting
our
understanding
dynamics
over
time.
In
this
review,
we
examine
how
humans,
niche
constructors,
have
facilitated
new
host
species
‘disease-scapes’
from
Pleistocene
Anthropocene,
viewing
zooarchaeological,
bioarchaeological
palaeoecological
data
with
a
perspective.
We
also
highlight
biomolecular
tools
advances
‘-omics’
holistically
coupled
reconstructions
service
studying
disease
emergence
re-emergence.
Transboundary and Emerging Diseases,
Год журнала:
2022,
Номер
69(5)
Опубликована: Апрель 12, 2022
The
unusual
genetic
diversity
of
the
Omicron
strain
has
led
to
speculation
about
its
origin.
mathematical
modelling
platform
developed
for
Stockholm
Paradigm
(SP)
indicates
strongly
that
it
retro-colonized
humans
from
an
unidentified
nonhuman
mammal,
likely
originally
infected
by
humans.
relationship
between
and
all
other
SARS-CoV-2
variants
oscillations
among
hosts,
a
core
part
SP.
Such
result
emergence
novel
following
colonization
new
replenishing
expanding
risk
space
disease
emergence.
SP
predicts
pathogens
colonize
hosts
using
pre-existing
capacities.
Those
events
are
thus
predictable
certain
extent.
Novel
emerge
after
not
predictable.
This
makes
imperative
take
proactive
measures
anticipating
emerging
infectious
diseases
(EID)
mitigating
their
impact.
suggests
policy
protocol,
DAMA,
accomplish
this
goal.
DAMA
comprises:
DOCUMENT
detect
before
they
in
places
or
hosts;
ASSESS
determine
risk;
MONITOR
changes
pathogen
populations
increase
outbreaks
ACT
prevent
when
possible
minimize
impact
occur.
Journal of Mammalogy,
Год журнала:
2023,
Номер
104(3), С. 430 - 443
Опубликована: Июнь 1, 2023
Abstract
The
Convention
on
Biological
Diversity
and
the
Nagoya
Protocol
Access
Benefit-Sharing
provide
an
international
legal
framework
that
aims
to
prevent
misappropriation
of
genetic
resources
a
country
ensure
fair
equitable
sharing
benefits
arising
from
their
use.
legislation
was
negotiated
at
behest
lower-income,
biodiverse
countries
derived
research
development
within
jurisdictions
were
equitably
returned
could
thereby
incentivize
conservation
sustainable
use
biodiversity.
Despite
good
intentions,
however,
rapid
adoption
access
benefit-sharing
measures
national
level,
often
without
participatory
strategic
planning,
has
hampered
noncommercial,
collaborative
with
counterproductive
consequences
for
biodiversity
We
outline
how
current
implementation
affect
noncommercial
research,
such
as
conducted
in
many
disciplines
biology,
including
mammalogy.
case
study
Brazil,
early
adopter,
illustrate
some
challenges
highlight
downstream
emerging
pathogen
public
health.
Most
pathogens
colonize
or
jump
humans
nonhuman
mammals,
but
zoonotic
diseases
is
complicated
by
potential
commercial
applications.
Last,
we
identify
proactive
ways
mammalogical
community
engage
Protocol,
through
nonmonetary
working
local
natural
history
collections.
Leveraging
scientific
societies
collectively
communicate
needs
science
policy
makers
will
be
critical
ensuring
appropriate
accommodations
are
research.
PLOS Global Public Health,
Год журнала:
2025,
Номер
5(1), С. e0003892 - e0003892
Опубликована: Янв. 30, 2025
Climate
change
is
having
unprecedented
impacts
on
human
health,
including
increasing
infectious
disease
risk.
Despite
this,
health
systems
across
the
world
are
currently
not
prepared
for
novel
scenarios
anticipated
with
climate
change.
While
need
to
develop
adaptation
strategies
has
been
stressed
in
past,
there
no
clear
consensus
how
this
can
be
achieved,
especially
rural
areas
low-
and
middle-income
countries
that
experience
high
burdens
simultaneously.
Here,
we
highlight
put
context
of
demonstrate
achieved
by
taking
into
account
all
aspects
risk
(i.e.,
pathogen
hazards,
exposure
vulnerability
these
hazards).
The
framework
focuses
communities
East
Africa
since
region
impacts,
present
specific
vulnerabilities
climate-related
have
regular
a
burden
diseases.
Implementing
outlined
approach
help
make
adapted
avoid
slowing
momentum
towards
achieving
global
grand
challenge
targets.
Abstract
Noninvasive
brain
stimulation
(NIBS)
is
pivotal
in
studying
human
brain-behavior
relations
and
treating
disorders.
NIBS
effectiveness
relies
on
informed
targeting
of
specific
regions,
a
challenge
due
to
anatomical
differences
between
humans.
Computational
volumetric
head
modeling
can
capture
individual
effects
enable
comparison
across
population.
However,
most
studies
implementing
use
single-head
model,
ignoring
morphological
variability,
potentially
skewing
interpretation,
realistic
precision.
We
present
comprehensive
dataset
100
models
with
variable
tissue
conductivity
values,
lead-field
matrices,
standard-space
co-registrations,
quality-assured
segmentations
provide
large
sample
healthy
adult
variance.
Leveraging
the
Human
Connectome
Project
s1200
release,
this
powers
population
for
target
optimization,
MEEG
source
simulations,
advanced
meta-analysis
studies.
performed
quality
assessment
each
mesh,
which
included
semi-manual
segmentation
accuracy
correction
finite-element
analysis
measures.
This
will
facilitate
developments
academic
clinical
research.
Collections’
digitisation
is
a
priority
in
many
natural
history
collections,
and
publicly
available
datasets
are
expanding
rapidly.
The
potential
value
of
collections
remains
largely
untapped
even
modern
research,
because
the
vast
scope
dwarfs
current
efforts
at
data
mobilisation.
Collections
continually
expanding,
there
an
estimated
3
billion
undigitised
specimen
records
worldwide.
In
this
review,
we
use
simple
model
to
illustrate
that
global
will
not
succeed
until
late
21
st
century
earliest,
unless
new
technologies
harnessed
commitments
by
funding
bodies
society
made.
As
advance
toward
digitisation,
equally
important
consideration
majority
these
digital
only
represent
fraction
information
potentially
from
collection
objects.
term
“collectomics”
was
coined
discussions
within
Senckenberg
institution
as
phrase
for
frameworks
embrace
all
future
knowledge
derived
specimens.
This
expands
on
concept
museomics,
which
originally
defined
focus
molecular
generated
museum
Rooted
extended
specimen,
collectomics
encompasses
metadata,
images,
traits,
DNA,
further
extracted
with
yet
unknown
applications,
connected
environmental
other
historical
contextual
information.
Thus,
view
under
limited
but
directly
integrates
evolutionary,
ecosystem
social
sciences,
including
human
contributions
collectors,
donors,
researchers
past
future.
A
envisions
seamless
integration
multidimensional
specimen-based
data,
interoperability
among
historical,
artistic,
ethnographic,
generate
needed
tackle
challenges.
Journal of Mammalogy,
Год журнала:
2025,
Номер
unknown
Опубликована: Апрель 18, 2025
Abstract
Freezing
has
proven
to
be
an
ideal
means
for
preserving
tissues
molecular
research
on
mammals.
Here,
we
trace
the
origins,
early
practices,
and
rapid
growth
of
frozen
tissue
collections
better
understand
history,
science,
people
that
led
development
recent
these
internationally
valuable
resources.
Frozen
grew
gradually
from
rudimentary
beginnings
in
1970s
but
have
expanded
rapidly
years,
providing
data
studies
biodiversity,
phylogenetics,
emerging
pathogens,
isotopes,
contaminants,
among
other
avenues
research.
Over
decades,
field
collecting
storage
changed
significantly.
In
mid-1980s,
example,
polymerase
chain
reaction—which
allowed
researchers
amplify
a
specific
segment
DNA
many
times
over—reinforced
importance
resources
burgeoning
genetics.
Ultracold
mechanical
freezers
hold
at
−80
°C
became,
remain,
popular
because
their
ease
use
delayed
degradation.
Portable
liquid
nitrogen
dewars
evolved
metal
tanks
compact
“dry
shippers”
with
absorbent
liner
can
maintain
low
temperatures
30
d
without
being
refilled
are
commonplace
field.
Larger,
vapor-phase
cryotanks
becoming
increasingly
long-term
preservation
they
safeguard
thermal
fluctuation
may
induced
by
temporary
electrical
failures.
More
than
1.5
million
samples
associated
museum
voucher
preparations
now
preserved
worldwide,
allowing
in-depth
study
mammalian
genetics
investigation
questions
were
unimaginable
even
few
years
ago.