bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Ноя. 15, 2023
Abstract
Toxoplasma
gondii
,
a
medically
important
intracellular
parasite,
uses
GRA
proteins,
secreted
from
dense
granule
organelles,
to
mediate
nutrient
flux
across
the
parasitophorous
vacuole
membrane
(PVM).
GRA17
and
GRA23
are
known
pore-forming
proteins
on
PVM
involved
in
this
process,
but
roles
of
additional
have
remained
largely
uncharacterized.
We
recently
identified
GRA72
as
synthetically
lethal
with
.
Deleting
produced
similar
phenotypes
Δgra17
parasites,
computational
predictions
suggested
it
forms
pore.
To
understand
how
functions
we
performed
immunoprecipitation
experiments
GRA47
an
interactor
GRA72.
Deletion
resulted
aberrant
‘bubble
vacuole’
morphology
reduced
small
molecule
permeability,
mirroring
phenotype
observed
knockouts.
Structural
indicated
that
form
heptameric
hexameric
pores,
respectively,
conserved
histidine
residues
lining
Mutational
analysis
highlighted
critical
role
these
histidines
for
protein
functionality.
Validation
through
electrophysiology
confirmed
alterations
conductance,
corroborating
their
capabilities.
Furthermore,
Δ
gra47
parasites
expressing
mutation
had
vitro
proliferation
attenuated
virulence
mice.
Our
findings
show
regulating
thereby
expanding
repertoire
potential
therapeutic
targets
against
infections.
IMPORTANCE
is
parasite
poses
significant
health
risks
those
impaired
immunity.
It
replicates
inside
host
cells
shielded
by
(PVM),
which
controls
waste
exchange
host.
GRA72,
previously
essential
absence
channel,
implicated
forming
alternative
channel.
Here
found
associates
also
PVM’s
permeability
molecules.
Removal
leads
distorted
vacuoles
impairs
transport
PVM,
resembling
effects
deletions.
models
suggest
distinct
pore
structures,
pore-lining
function.
strains
lacking
GRA47,
or
mutation,
growth
mice,
highlighting
new
treatments
Toxoplasmosis.
Current Opinion in Microbiology,
Год журнала:
2025,
Номер
83, С. 102577 - 102577
Опубликована: Янв. 8, 2025
Genome
editing
technologies,
such
as
CRISPR-Cas9,
have
revolutionised
the
study
of
genes
in
a
variety
organisms,
including
unicellular
parasites.
Today,
CRISPR-Cas9
technology
is
vastly
applied
high-throughput
screens
to
investigate
interactions
between
Apicomplexan
parasite
Toxoplasma
gondii
and
its
hosts.
In
vitro
vivo
T.
performed
naive
restrictive
conditions
led
discovery
essential
fitness-conferring
genes,
well
factors
important
for
virulence
dissemination.
Recent
studies
adapted
screening
based
on
phenotypes
unrelated
survival.
These
advances
were
achieved
by
using
conditional
systems
coupled
with
imaging,
single-cell
RNA
sequencing
phenotypic
selection.
Here,
we
review
state-of-the-art
technologies
focus
gondii,
highlighting
strengths,
current
limitations
future
avenues
development,
application
other
species.
,
a
medically
important
intracellular
parasite,
uses
GRA
proteins
secreted
from
dense
granule
organelles
to
mediate
nutrient
flux
across
the
parasitophorous
vacuole
membrane
(PVM).
GRA17
and
GRA23
are
known
pore-forming
on
PVM
involved
in
this
process,
but
roles
of
additional
have
remained
largely
uncharacterized.
We
recently
identified
ABSTRACT
The
research
field
to
identify
and
characterize
genes
essential
for
in
vivo
virulence
Toxoplasma
gondii
has
been
dramatically
advanced
by
a
series
of
clustered
regularly
interspaced
short
palindromic
repeats
(CRISPR)
screens.
Although
subcellular
localizations
thousands
proteins
were
predicted
the
spatial
proteomic
method
called
hyperLOPIT,
those
more
than
1,000
remained
unassigned,
their
essentiality
was
also
unknown.
In
this
study,
we
generated
two
small-scale
gRNA
libraries
targeting
approximately
600
hyperLOPIT-unassigned
performed
CRISPR
As
result,
identified
several
that
previously
unreported.
We
further
characterized
candidates,
TgGTPase
TgRimM,
which
are
localized
cytoplasm
apicoplast,
respectively.
Both
parasite
widely
conserved
phylum
Apicomplexa.
Collectively,
our
current
study
provides
resource
estimating
with
unknown
localizations.
IMPORTANCE
is
protozoan
causes
severe
infection
immunocompromised
patients
or
newborns.
possesses
8,000
genes;
however,
not
fully
identified.
apicomplexan
parasites,
including
,
developed
unique
organelles
do
exist
other
model
organisms;
thus,
determining
location
important
understanding
functions.
Here,
used
genetic
screens
enabled
us
investigate
hundreds
during
mouse
infection.
screened
many
novel
confer
mice.
Among
top
hits,
virulence,
Our
findings
will
contribute
how
apicomplexans
adapt
host
environment
cause
disease.
The
obligate
intracellular
parasite
Toxoplasma
gondii
replicates
within
a
specialized
compartment
called
the
parasitophorous
vacuole
(PV).
Recent
work
showed
that
despite
living
PV,
endocytoses
proteins
from
cytosol
of
infected
host
cells
via
so-called
ingestion
pathway.
pathway
is
initiated
by
dense
granule
protein
GRA14,
which
binds
endosomal
sorting
complex
required
for
transport
(ESCRT)
machinery
to
bud
vesicles
into
lumen
PV.
protein-containing
are
internalized
and
trafficked
plant
vacuole-like
(PLVAC),
where
cathepsin
protease
L
(CPL)
degrades
cargo,
chloroquine
resistance
transporter
(CRT)
exports
resulting
peptides
amino
acids
cytosol.
However,
although
was
proposed
be
conduit
nutrients,
there
limited
evidence
this
hypothesis.
We
reasoned
if
uses
acquire
then
parasites
lacking
CPL,
or
CRT
should
rely
more
on
biosynthetic
pathways
alternative
scavenging
pathways.
To
explore
this,
we
conducted
genome-wide
clustered
regularly
interspaced
short
palindromic
repeats
(CRISPR)
screen
in
wild-type
(WT)
Δgra14,
Δcpl,
Δcrt
mutants
identify
genes
become
fitness
conferring
ingestion-deficient
parasites.
Our
revealed
significant
overlap
potentially
compared
WT.
Pathway
analysis
indicated
Δcpl
relied
pyrimidine
biosynthesis,
fatty
acid
tricarboxylic
(TCA)
cycle,
lysine
degradation.
Bulk
metabolomic
reduced
levels
glycolytic
intermediates
WT,
highlighting
pathway's
potential
role
resource
scavenging.
Interestingly,
an
exacerbated
growth
defect
when
cultured
acid-depleted
media,
suggesting
disrupting
proteolysis
export
proteolytic
products
PLVAC
affects
survival
during
nutrient
scarcity.
pathogen
infects
virtually
any
nucleated
cell
most
warm-blooded
animals.
Infections
asymptomatic
cases,
but
people
with
weakened
immunity
can
experience
severe
disease.
For
replicate
host,
it
must
efficiently
essential
especially
as
unable
make
several
key
metabolites.
Understanding
mechanisms
scavenges
nutrients
crucial
identifying
therapeutic
targets.
study
suggests
contributes
sustaining
metabolites
replication
under
acid-limiting
conditions.
This
advances
our
understanding
metabolic
adaptability
Toxoplasma.
Toxoplasma
gondii
is
a
widespread
intracellular
protozoan
pathogen
infecting
virtually
all
warm-blooded
animals.
This
parasite
acquires
host-derived
resources
to
support
its
replication
inside
membrane-bound
parasitophorous
vacuole
within
infected
host
cells.
Previous
research
has
discovered
that
actively
endocytoses
proteins
and
transports
them
lysosome-equivalent
structure
for
digestion.
However,
few
molecular
determinants
required
trafficking
of
material
the
were
known.
A
recent
study
(Q.-Q.
Wang,
M.
Sun,
T.
Tang,
D.-H.
Lai,
et
al.,
mBio
14:e01309-23,
2023,
https://doi.org/10.1128/mbio.01309-23)
identified
critical
role
membrane
anchoring
via
prenylation
in
endocytosed
by
Toxoplasma,
including
an
essential
ortholog
Rab1B.
The
authors
also
found
TgRab1
crucial
protein
rhoptry
secretory
organelles,
indicating
dual
endocytic
exocytic
trafficking.
sets
stage
further
dissecting
endomembrane
along
with
potentially
exploiting
as
target
therapeutic
development.
Frontiers in Cellular and Infection Microbiology,
Год журнала:
2024,
Номер
13
Опубликована: Янв. 12, 2024
Apicomplexan
parasites
that
reside
within
a
parasitophorous
vacuole
harbor
conserved
pore-forming
protein
enables
small-molecule
transfer
across
the
membrane
(PVM).
In
Plasmodium
cause
malaria,
this
nutrient
pore
is
formed
by
EXP2
which
can
complement
function
of
GRA17,
an
orthologous
in
Toxoplasma
gondii.
EXP2,
however,
has
additional
parasites,
serving
also
as
component
export
machinery
PTEX.
To
examine
how
play
role,
transgenes
encoded
truncations
hybrid
GRA17-EXP2,
or
under
transcriptional
control
different
promoters
were
expressed
knockdown
to
determine
could
function.
This
revealed
unique
protein,
and
its
role
P.
falciparum
cannot
be
complemented
T.
gondii
GRA17.
was
despite
addition
assembly
strand
part
linker
helix
are
regions
necessary
for
interaction
with
other
core
PTEX
components.
indicates
body
region
plays
critical
and/or
absence
GRA
proteins
leads
reduced
efficiency
insertion
into
PVM
complementation
potential.
Altering
timing
abundance
expression
did
not
affect
but
affected
parasite
viability,
indicating
profile
when
compared
components
it
serve
exchange.
Molecular Microbiology,
Год журнала:
2024,
Номер
121(4), С. 717 - 726
Опубликована: Янв. 15, 2024
Abstract
Apicomplexan
parasites
are
aetiological
agents
of
numerous
diseases
in
humans
and
livestock.
Functional
genomics
studies
these
enable
the
identification
biological
mechanisms
protein
functions
that
can
be
targeted
for
therapeutic
intervention.
Recent
improvements
forward
genetics
whole‐genome
screens
utilising
CRISPR/Cas
technology
have
revolutionised
functional
analysis
genes
during
infection
host
cells.
Here,
we
highlight
key
discoveries
from
CRISPR/Cas9
Apicomplexa
or
their
infected
cells
discuss
remaining
challenges
to
maximise
this
may
help
answer
fundamental
questions
about
parasite–host
interactions.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Янв. 28, 2024
ABSTRACT
The
research
field
to
identify
and
characterize
virulence
genes
in
Toxoplasma
gondii
has
been
dramatically
advanced
by
a
series
of
vivo
CRISPR
screens.
Although
subcellular
localizations
thousands
proteins
were
predicted
the
spatial
proteomic
method
called
hyperLOPIT,
those
more
than
1000
remained
unassigned
their
essentiality
was
also
unknown.
In
this
study,
we
generated
two
small-scale
gRNA
libraries
targeting
approximately
600
hyperLOPIT-unassigned
performed
As
result,
identified
several
fitness-conferring
that
previously
unreported.
We
further
characterized
candidates,
TgGTPase
TgRimM,
which
are
localized
cytoplasm
apicoplast,
respectively.
Both
essential
for
parasite
widely
conserved
phylum
Apicomplexa.
Collectively,
our
current
study
provides
resource
estimating
with
unknown
localizations.
IMPORTANCE
is
protozoan
causes
severe
infection
immunocompromised
patients
or
newborns.
possesses
8000
genes;
however,
determine
not
fully
identified.
apicomplexan
parasites,
including
,
developed
unique
organelles
do
exist
other
model
organisms;
thus,
determining
location
important
understanding
functions.
Here,
used
genetic
screens
enabled
us
investigate
hundreds
during
mouse
infection.
screened
many
novel
confer
fitness
mice.
Among
top
hits,
genes,
Our
findings
will
contribute
how
apicomplexans
adapt
host
environment
cause
disease.