Scientific Reports,
Год журнала:
2024,
Номер
14(1)
Опубликована: Окт. 4, 2024
Abstract
Triple-negative
breast
cancer
(TNBC)
lacks
estrogen,
progesterone,
and
human
epidermal
growth
factor
receptors
has
a
poor
prognosis
as
it
is
resistant
to
chemotherapy.
A
new
treatment
option
for
this
type
of
may
be
by
putting
these
malignant
cells
into
dormancy.
The
oocyte’s
embryonic
milieu
presents
unique
tumor
reversion
microenvironment
inducing
arrest
changing
cells’
phenotypes.
We
conducted
an
in-silico
study
determine
the
most
likely
oocyte
extract
(OE)
proteins
involved
in
dormancy
using
HDock,
CluPro,
molecular
dynamic
(MD)
simulation.
Results
showed
low
energy
scores
complexes
between
OE
four
surface
markers:
K1C14,
CLD3,
CLD4,
ITA6.
Apolipoprotein
A1
(APOA1)
C3
(APOC3)
highest
stability
affinity
with
These
are
key
tumor-related
pathways
such
angiogenesis,
proliferation,
apoptosis,
migration.
This
will
pave
way
exploring
novel
therapeutic
options
induce
TNBC
cells.
Redox Biology,
Год журнала:
2024,
Номер
71, С. 103093 - 103093
Опубликована: Фев. 17, 2024
Solid
tumors
are
characterized
by
hypoxic
areas,
which
prone
for
macrophage
infiltration.
Once
infiltrated,
macrophages
polarize
to
tumor
associated
(TAM)
support
progression.
Therefore,
the
crosstalk
between
TAMs
and
cells
is
of
current
interest
development
novel
therapeutic
strategies.
These
may
comprise
induction
an
iron-
lipid
peroxidation-dependent
form
cell
death,
known
as
ferroptosis.
To
study
-
we
polarized
primary
human
towards
a
TAM-like
phenotype,
co-cultured
them
with
HT1080
fibrosarcoma
cells,
analyzed
response
ferroptosis
induction.
In
expression
ceruloplasmin
mRNA
increased,
was
driven
hypoxia
inducible
factor
2
signal
transducer
activator
transcription
1.
Subsequently,
transferred
from
via
extracellular
vesicles.
translated
into
protein
protect
RSL3-induced
Mechanistically
this
based
on
reduced
iron
abundance
peroxidation.
Interestingly,
in
naïve
also
induced
under
co-culture
recapitulated
protective
effect
observed
TAM
co-cultures.
conclusion,
provoke
release
thereby
peroxidation/ferroptosis.
International Journal of Biological Sciences,
Год журнала:
2024,
Номер
20(4), С. 1356 - 1374
Опубликована: Янв. 1, 2024
Endometrial
cancer
(EC)
is
a
prevalent
gynecological
malignancy,
and
metabolic
disorders
are
among
its
most
significant
risk
factors.Abnormal
iron
metabolism
associated
with
the
progression
of
malignancy.Nevertheless,
involvement
in
EC
remains
uncertain.Ceruloplasmin
(CP)
functions
as
multicopper
oxidase
ferroxidase,
playing
crucial
role
maintaining
balance
between
copper
iron.Prior
research
has
demonstrated
that
dysregulated
expression
CP
important
clinical
implications
EC.However,
specific
underlying
molecular
mechanisms
uncertain.This
examined
impact
on
malignant
advancement
by
suppressing
ferroptosis.Next,
we
explored
possibility
Long
non-coding
RNA
(lncRNA)
LINC02936/SIX1/CP
axis
may
be
key
pathway
for
inhibiting
ferroptosis
promoting
EC.Mechanistically,
SIX1
modulates
CP,
whereas
LINC02936
interacts
recruits
to
promoter,
leading
upregulation
inhibition
ferroptosis,
promotion
progression.Administration
small
peptide
cloud
block
LINC02936-SIX1
interaction,
thereby
inhibits
ferroptosis.Altogether,
this
first
report
lncRNA
regulation
EC.Our
enhances
knowledge
lncRNA-mediated
indicates
potential
therapeutic
significance
treating
EC.
Frontiers in Genetics,
Год журнала:
2022,
Номер
13
Опубликована: Янв. 27, 2022
Background:
Lung
adenocarcinoma
(LUAD)
remains
a
lethal
disease
worldwide,
with
numerous
studies
exploring
its
potential
prognostic
markers
using
traditional
RNA
sequencing
(RNA-seq)
data.
However,
it
cannot
detect
the
exact
cellular
and
molecular
changes
in
tumor
cells.
This
study
aimed
to
construct
model
for
LUAD
single-cell
RNA-seq
(scRNA-seq)
Methods:
Bulk
data
were
downloaded
from
The
Cancer
Genome
Atlas
(TCGA)
database.
scRNA-seq
acquired
Gene
Expression
Omnibus
(GEO)
uniform
manifold
approximation
projection
(UMAP)
was
used
dimensionality
reduction
cluster
identification.
Weighted
Correlation
Network
Analysis
(WGCNA)
utilized
identify
key
modules
differentially
expressed
genes
(DEGs).
non-negative
Matrix
Factorization
(NMF)
algorithm
different
subtypes
based
on
DEGs.
Cox
regression
analysis
develop
model.
characteristics
of
mutation
landscape,
immune
status,
checkpoint
inhibitors
(ICIs)
related
between
risk
groups
also
investigated.
Results:
four
samples
integrated
13
clusters
9cell
types.
After
applying
differential
analysis,
NK
cells,
bladder
epithelial
bronchial
cells
identified
as
significant
cell
Overall,
329
DEGs
selected
construction
through
WGCNA.
Besides,
NMF
two
TCGA
cohort,
distinct
prognosis
being
observed.
We
developed
expression
levels
six
A
higher
score
significantly
correlated
poor
survival
outcomes
but
associated
more
frequent
TP53
rate,
burden
(TMB),
up-regulation
PD-L1.
Two
independent
external
validation
cohorts
adopted
verify
our
results,
consistent
results
observed
them.
Conclusion:
constructed
validated
by
integrating
10×
bulk
we
this
population,
characteristics.
Frontiers in Immunology,
Год журнала:
2022,
Номер
13
Опубликована: Сен. 23, 2022
Background
Due
to
the
different
infiltration
abundance
of
immune
cells
in
tumor,
efficacy
immunotherapy
varies
widely
among
individuals.
Recently,
growing
evidence
suggested
that
cuproptosis
has
impact
on
cancer
immunity
profoundly.
However,
comprehensive
roles
cuproptosis-related
genes
tumor
microenvironment
(TME)
and
response
are
still
unclear.
Methods
Based
43
genes,
we
employed
unsupervised
clustering
identify
patterns
single-sample
gene
set
enrichment
analysis
algorithm
build
a
signature
for
individual
patient’s
cell
checkpoint
blockade
(ICB)
evaluation.
Then,
were
narrowed
down
using
univariate
Cox
regression
model
least
absolute
shrinkage
selection
operator
algorithm.
Finally,
risk
score
was
built
by
random
survival
forest
based
these
narrowed-down
genes.
Results
Two
distinct
developed,
with
cluster
1
showing
better
prognosis
higher
immune-related
pathways
cells.
For
evaluation,
could
be
used
not
only
predicting
TME
but
also
evaluating
an
individual’s
sensitivity
ICBs.
Patients
scores
exhibited
more
activated
processes,
infiltration,
curative
Furthermore,
robust
indicated
patients
showed
worse
outcomes,
which
validated
internal
external
validation
cohorts.
Ultimately,
nomogram
combined
prognostic
clinical
factors
it
excellent
prediction
accuracy
outcomes.
Conclusion
Distinct
have
significant
differences
kidney
renal
clear
carcinoma
(KIRC).
Cuproptosis
able
provide
guidance
precision
therapy
accurate
KIRC.
Frontiers in Immunology,
Год журнала:
2023,
Номер
14
Опубликована: Апрель 27, 2023
Background
The
role
of
copper
in
cancer
treatment
is
multifaceted,
with
homeostasis-related
genes
associated
both
breast
prognosis
and
chemotherapy
resistance.
Interestingly,
elimination
overload
have
been
reported
to
therapeutic
potential
treatment.
Despite
these
findings,
the
exact
relationship
between
homeostasis
development
remains
unclear,
further
investigation
needed
clarify
this
complexity.
Methods
pan-cancer
gene
expression
immune
infiltration
analysis
were
performed
using
Cancer
Genome
Atlas
Program
(TCGA)
dataset.
R
software
packages
employed
analyze
mutation
status
samples.
After
constructing
a
model
separate
samples
by
LASSO-Cox
regression,
we
examined
statement,
survival
status,
drug
sensitivity
metabolic
characteristics
high-
low-copper
related
scoring
groups.
We
also
studied
constructed
human
protein
atlas
database
analyzed
their
pathways.
Finally,
staining
was
clinical
sample
investigate
distribution
tissue
paracancerous
tissue.
Results
Pan-cancer
showed
that
copper-related
are
cancer,
profile
significantly
different
from
other
cancers.
essential
regression
ATP7B
(ATPase
Copper
Transporting
Beta)
DLAT
(Dihydrolipoamide
S-Acetyltransferase),
whose
enriched
cell
cycle
pathway.
group
presented
higher
levels
activation,
better
probabilities
survival,
enrichment
pathways
pyruvate
metabolism
apoptosis,
drugs.
Immunohistochemistry
high
Conclusion
This
study
displayed
impacts
on
overall
infiltration,
which
could
predict
patients’
tumor
statement.
These
findings
may
serve
support
future
research
efforts
aiming
at
improving
management
cancer.
Biomedicine & Pharmacotherapy,
Год журнала:
2023,
Номер
170, С. 115997 - 115997
Опубликована: Дек. 20, 2023
Nullomers
are
the
shortest
strings
of
absent
amino
acid
(aa)
sequences
in
a
species
or
group
species.
Primes
those
nullomers
that
have
not
been
detected
genome
any
9S1R
is
5-aa
peptide
prime
sequence
attached
to
5-arginine
aa,
used
treat
triple
negative
breast
cancer
(TNBC)
an
vivo
mouse
model.
This
unique
peptide,
administered
with
trehalose
carrier
(9S1R-NulloPT),
offers
enhanced
solubility
and
exhibits
distinct
anti-cancer
effects
against
TNBC.
In
our
study,
we
investigated
effect
9S1R-NulloPT
on
tumor
growth,
metabolism,
metastatic
burden,
immune-microenvironment
(TME),
transcriptome
aggressive
TNBC
tumors.
Notably,
treated
mice
had
smaller
tumors
initial
phase
treatment,
as
compared
untreated
control,
diminished
ex
bioluminescence
at
later-stages
-
indicative
metabolically
quiescent,
dying
The
treatment
also
caused
changes
TME
increased
infiltration
immune
cells
altered
transcriptome,
365
upregulated
genes
710
downregulated
genes.
Consistent
vitro
data,
were
enriched
cellular
metabolic
processes
(179),
specifically
mitochondrial
TCA
cycle/oxidative
phosphorylation
(44),
translation
machinery/ribosome
biogenesis
(45).
associated
developmental
(13),
ECM
organization
(12)
focal
adhesion
pathways
(7).
conclusion,
study
demonstrates
effectively
reduced
growth
during
its
phase,
altering
transcriptome.
induced
pathology
which
led
deceleration
tumors,
aligning
observations.
Radiology and Oncology,
Год журнала:
2024,
Номер
58(2), С. 300 - 310
Опубликована: Март 29, 2024
Abstract
Background
Biliary
tract
cancers
(BTCs)
are
usually
diagnosed
at
an
advanced
stage,
when
the
disease
is
incurable.
Currently
used
tumor
biomarkers
have
limited
diagnostic
value
for
BTCs,
so
there
urgent
need
sensitive
and
specific
their
earlier
diagnosis.
Deregulation
of
homeostasis
trace
elements
involved
in
carcinogenesis
different
cancers,
including
BTCs.
The
objective
study
to
determine/compare
total
concentrations
copper
(Cu),
zinc
(Zn)
iron
(Fe)
proportions
free
Cu
bound
ceruloplasmin
(Cp)
isotopic
ratio
65
Cu/
63
serum
samples
from
healthy
volunteers
cancer
patients
using
inductively
coupled
plasma-mass
spectrometry-based
methods
(ICP-MS).
Patients
In
this
prospective,
noninterventional,
nonrandomized
20
will
be
enrolled
identify
Cu,
Zn
Fe
levels,
fractionation
as
a
predictive
biomarker
response
systemic
therapy
which
evaluated
by
computed
tomography.
Newly
developed
analytical
based
on
ICP-MS
applied
metal-based
research
oncology.
Conclusions
comparison
concentration
selected
elements,
proportion
Cp
conducted
provide
foundation
development
BTC
screening
methodology
data
usability
potential
BTCs
therapy.