Genomic characterization of a dog-mediated rabies outbreak in El Pedregal, Arequipa, Peru DOI Creative Commons

Renzo Salazar,

Kirstyn Brunker,

Elvis W. Díaz

и другие.

PLoS neglected tropical diseases, Год журнала: 2025, Номер 19(3), С. e0012396 - e0012396

Опубликована: Март 5, 2025

Rabies, a re-emerging zoonosis with the highest known human case fatality rate, has been largely absent from Peru, except for endemic circulation in Puno region on Bolivian border and re-emergence Arequipa City 2015, where it persisted. In 2021, an outbreak occurred rapidly expanding city of El Pedregal near Arequipa, followed by more cases 2022 after nearly year epidemiological silence. While currently under control, questions persist regarding origin implications maintaining rabies control Peru. We sequenced 25 dog virus (RABV) genomes (n=11) (n=14) 2021-2023 using Nanopore sequencing Historical (n=4, 2010-2012) (n=5, 2015-2019), were Illumina approach UK. total, 34 RABV generated, including archived newly obtained samples. The analyzed phylogenetically to understand outbreak's context origins. Phylogenomic analysis identified two genetic clusters Pedregal: 2021 stemmed single introduction unrelated cases, while sequence suggested new rather than persistence. relation canine diversity Latin America, all sequences belonged minor clade, Cosmopolitan Am5, sharing relatives Bolivia, Argentina, Brazil. Genomic insights into revealed multiple introductions over 2-year window. Eco-epidemiological conditions, migratory worker patterns, suggest human-mediated movement drove introductions. Despite containment, remains at risk dog-mediated due ongoing Puno, Bolivia. Human-mediated dogs presents major jeopardizing regional control. Additional data is needed comprehensive phylogenetic analyses.

Язык: Английский

Phylogeography Analysis Reveals Rabies Epidemiology, Evolution, and Transmission in the Philippines DOI Creative Commons
Liang Zhang,

Jeffrey L. Cruz,

Yao Tian

и другие.

Molecular Biology and Evolution, Год журнала: 2025, Номер 42(2)

Опубликована: Фев. 1, 2025

Abstract Rabies, caused by rabies virus, is a severe public health problem in the Philippines, where animal epidemiology had been extensively investigated, but little known about national epidemiologic situations since 2010. Here, we report 12-year nationwide surveillance with systematic phylogenetic analysis, which 353 whole genomes of viruses collected from cases between 2018 and 2022 were obtained. The spatial–temporal evolutionary analyses showed that Philippines exclusively classified into SEA4 subclade within Asian clade, forming three major geographically specific lineages. Intra-island spread predominates transmission island regions, while inter-island transmission, very limited, likely due to ocean barriers. Overall, our findings have provided most comprehensive dataset on infected species, geographic distribution, dynamics, genetic diversity viruses, risk factors, thus established basis support WOAH-endorsed control program for dog-mediated Philippines.

Язык: Английский

Процитировано

0

Deadly Injuries Sustained From a Hyena Attack: The Importance of Timely Diagnosis and Treatment – A Case Report DOI Creative Commons

A.G. Ahmed,

İsmail Gedi İbrahim, Ismail Mohamud Abdullahi

и другие.

Open Access Emergency Medicine, Год журнала: 2025, Номер Volume 17, С. 121 - 127

Опубликована: Фев. 1, 2025

Animal bites represent a significant global public health concern, with hyena attacks being rare but highly destructive. This report details the case of 22-year-old male who was attacked by while herding camels in rural Qardho, Somalia. The attack resulted traumatic amputation both testicles and penis, finger loss, extensive muscle damage, jawbone fracture. patient initially received local care subsequently transferred to Mogadishu for advanced treatment. Key interventions included wound closure, tracheotomy, broad-spectrum antibiotics, tetanus prophylaxis. highlights complexities managing severe trauma resource-limited settings underscores necessity timely, multidisciplinary care. Long-term rehabilitation, along psychological support, are essential components patient's recovery. Furthermore, emphasizes importance prevention strategies ensuring access specialized medical remote regions.

Язык: Английский

Процитировано

0

Genomic characterization of a dog-mediated rabies outbreak in El Pedregal, Arequipa, Peru DOI Creative Commons

Renzo Salazar,

Kirstyn Brunker,

Elvis W. Díaz

и другие.

PLoS neglected tropical diseases, Год журнала: 2025, Номер 19(3), С. e0012396 - e0012396

Опубликована: Март 5, 2025

Rabies, a re-emerging zoonosis with the highest known human case fatality rate, has been largely absent from Peru, except for endemic circulation in Puno region on Bolivian border and re-emergence Arequipa City 2015, where it persisted. In 2021, an outbreak occurred rapidly expanding city of El Pedregal near Arequipa, followed by more cases 2022 after nearly year epidemiological silence. While currently under control, questions persist regarding origin implications maintaining rabies control Peru. We sequenced 25 dog virus (RABV) genomes (n=11) (n=14) 2021-2023 using Nanopore sequencing Historical (n=4, 2010-2012) (n=5, 2015-2019), were Illumina approach UK. total, 34 RABV generated, including archived newly obtained samples. The analyzed phylogenetically to understand outbreak's context origins. Phylogenomic analysis identified two genetic clusters Pedregal: 2021 stemmed single introduction unrelated cases, while sequence suggested new rather than persistence. relation canine diversity Latin America, all sequences belonged minor clade, Cosmopolitan Am5, sharing relatives Bolivia, Argentina, Brazil. Genomic insights into revealed multiple introductions over 2-year window. Eco-epidemiological conditions, migratory worker patterns, suggest human-mediated movement drove introductions. Despite containment, remains at risk dog-mediated due ongoing Puno, Bolivia. Human-mediated dogs presents major jeopardizing regional control. Additional data is needed comprehensive phylogenetic analyses.

Язык: Английский

Процитировано

0