Differential prolyl hydroxylation by six Physcomitrella prolyl-4 hydroxylases
Computational and Structural Biotechnology Journal,
Год журнала:
2024,
Номер
23, С. 2580 - 2594
Опубликована: Июнь 14, 2024
Hydroxylation
of
prolines
to
4-trans-hydroxyproline
(Hyp)
is
mediated
by
prolyl-4
hydroxylases
(P4Hs).
In
plants,
Hyps
occur
in
Hydroxyproline-rich
glycoproteins
(HRGPs),
and
are
frequently
O-glycosylated.
While
both
modifications
important,
e.g.
for
cell
wall
stability,
they
undesired
plant-made
pharmaceuticals.
Sequence
motifs
prolyl-hydroxylation
were
proposed
but
did
not
include
data
from
mosses,
such
as
Physcomitrella.
We
identified
six
moss
P4Hs
phylogenetic
reconstruction.
Our
analysis
73
24
secretory
proteins
multiple
mass
spectrometry
datasets
revealed
that
near
other
prolines,
alanine,
serine,
threonine
valine
preferentially
hydroxylated.
About
95
%
predictable
with
combined
established
methods.
our
data,
AOV
was
the
most
frequent
pattern.
A
combination
443
AlphaFold
models
MS
3000
found
mainly
on
protein
surfaces
disordered
regions.
Moss-produced
human
erythropoietin
(EPO)
exhibited
O-glycosylation
arabinose
chains
two
Hyps.
This
modification
significantly
reduced
a
p4h1
knock-out
(KO)
Physcomitrella
mutant.
Quantitative
proteomics
different
p4h
mutants
specific
changes
amounts,
modified
pattern,
suggesting
differential
function
P4Hs.
RT-PCR
effect
single
KOs
expression
five
genes,
partial
compensation
mutation.
AlphaFold-Multimer
P4H1
its
target
EPO
peptide
superposed
crystal
structure
Chlamydomonas
suggested
significant
amino
acids
active
centre
enzyme
differences
between
Язык: Английский
IgG1 versus IgG3: influence of antibody-specificity and allotypic variance on virus neutralization efficacy
Frontiers in Immunology,
Год журнала:
2024,
Номер
15
Опубликована: Окт. 24, 2024
Despite
the
unique
advantages
of
IgG3
over
other
IgG
subclasses,
such
as
mediating
enhanced
effector
functions
and
increased
flexibility
in
antigen
binding
due
to
a
long
hinge
region,
therapeutic
potential
remains
largely
unexplored.
This
may
be
attributed
difficulties
recombinant
expression
reduced
plasma
half-life
most
allotypes.
Here,
we
report
plant
two
SARS-CoV-2
neutralizing
monoclonal
antibodies
(mAbs)
that
exhibit
high
(P5C3)
low
(H4)
binding.
P5C3
H4-IgG1
mAbs
were
subclass-switched
formats,
designed
for
efficient
production
PK
values,
carrying
three
allotypic
variations,
referred
-WT,
-H,
-KVH.
A
total
eight
produced
glycoengineered
plants
synthesize
fucose-free
complex
N-glycans
with
great
homogeneity.
Antigen,
IgG-FcγR
immune
complement
studies
demonstrated
similar
activities
all
mAbs.
In
accordance,
Abs
showed
minor
alterations
neutralization
(NT)
antibody-dependent
cell-mediated
virus
inhibition
(ADCVI).
Clear
functional
differences
observed
between
H4
variants
superior
ADCVI
NT
potencies
H.
Our
comparative
study
demonstrates
an
variant
Fc
domain
equivalent
or
compared
IgG3-WT,
but
stability
values
of
IgG1.
data
also
demonstrate
both
variability
antibody
specificity
are
important
fine-tuning
activities,
information
development
future
therapeutics.
Язык: Английский