Gene expression analysis of the Xenopus laevis early limb bud proximodistal axis DOI Creative Commons

Daniel T. Hudson,

Jessica S. Bromell,

R. C. Day

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2022, Номер unknown

Опубликована: Май 4, 2022

Abstract Background Limb buds develop as bilateral outgrowths of the lateral plate mesoderm and are patterned along three axes. Current models proximal to distal patterning early amniote limb suggest that two signals, a organising signal from apical epithelial ridge (AER, Fgfs) an opposing (retinoic acid) act on pattern this axis. Results Transcriptional analysis stage 51 Xenopus laevis hindlimb sectioned proximal-distal axis, showed region is distinct rest limb. Expression capn8 . 3 , novel calpain, was located in cells immediately flanking AER. The Wnt antagonist Dkk1 AER-specific limbs. Two transcription factors, sall1 zic5 were expressed mesenchyme. Zic 5 has no described association with development. We also describe expression genes, gata5 tnn not previously associated Differentially genes Fgf, retinoic acid (RA) signalling well differential cell adhesion proliferation. Conclusions identify new candidate for proximodistal patterning. Our RA-regulated supports role transient RA gradients bud proximal-to-distal anamniote model organism.

Язык: Английский

Cartilage mechanobiology during limb growth DOI Open Access
Vineel Kondiboyina

Опубликована: Янв. 1, 2024

The mechanobiology of cartilage during limb growth represents a complex interplay between mechanical forces and biological processes. However, the fundamental processes that involve formation from mesenchymal stem cells are not fully understood. Further, cellular level response in its native environment under physiological load is characterized. This thesis aims to bridge critical gaps our understanding development regeneration by investigating nuanced interactions mechanics within cartilaginous tissues. Identifying these research gaps, this encompasses three specific aims. Aim 1 focuses on characterizing viscoelastic material properties growing limbs, employing axolotls as an animal model. Our results reveal significant increases both instantaneous equilibrium shear moduli regeneration, coupled with notable changes short- long-term stress relaxation times. glycosaminoglycan content also development. 2 explores calcium signaling in-situ chondrocytes physiologically relevant cyclic loads dynamic hydrostatic pressure. findings underscore strain rate-dependent increase percentage responsive compressive loads, non-distinct time characteristics across loading conditions. Conversely, low magnitude pressure showed no impact chondrocytes. 3 investigates expression mechanosensitive ion channels (TRPV4, PIEZO1, PIEZO2) axolotl regeneration. study unveils presence TRPV4 PIEZO2 blastemal early late heightened condensing mesenchyme These taken together shed light intricate responses. implications abnormal mechanobiological profound, contributing developmental disorders musculoskeletal diseases. Understanding mechanisms conditions opens avenues for therapeutic strategies aimed at promoting proper mitigating skeletal abnormalities. Future will focus elucidating functional roles further expanding interconnections biology.--Author's abstract

Язык: Английский

Процитировано

0

Putative epithelial–mesenchymal transitions during salamander limb regeneration: Current perspectives and future investigations DOI
Ryan T. Kim, Jessica L. Whited

Annals of the New York Academy of Sciences, Год журнала: 2024, Номер unknown

Опубликована: Сен. 13, 2024

Abstract Previous studies have implicated epithelial–mesenchymal transition (EMT) in salamander limb regeneration. In this review, we describe putative roles for EMT during each stage of regeneration axolotls and other salamanders. We hypothesize that EMT‐like gene expression programs may regulate three main cellular processes regeneration: (1) keratinocyte migration wound closure; (2) transient invasion the stump by epithelial cells undergoing EMT; (3) use non‐epithelial blastemal progenitor to escape confines their niches. Finally, propose nontraditional warrant further investigation, including alternative regulators, stem cell activation, fibrosis induced aberrant EMT.

Язык: Английский

Процитировано

0

Species-specific oxygen sensing governs the initiation of vertebrate limb regeneration DOI Creative Commons
Georgios Tsissios, Marion Leleu, Kelly Hu

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Дек. 20, 2024

Why mammals cannot regenerate limbs, unlike amphibians, presents a longstanding puzzle in biology. We show that exposing ex vivo amputated embryonic mouse limbs to subatmospheric oxygen environment, or stabilizing oxygen-sensitive HIF1A enables not only rapid wound healing, but alters cellular mechanics, and reshapes the histone landscape prime regenerative fates. Conversely, Xenopus tadpole display low oxygen-sensing capacity, robust landscape, glycolytic programs even under high oxygen. This reduced stark contrast mammals, associates with decreased HIF1A-regulating gene expressions. Our findings thus uncover species-specific sensing as unifying mechanism for limb regeneration initiation across vertebrates, reveal how aquatic habitats may enhance capabilities, identify targetable barriers unlock latent adult mammals.

Язык: Английский

Процитировано

0

Hybridization Chain Reaction for mRNA Localization in Single Cells from Mouse and Human Cryosections DOI
Aaron A. May‐Zhang, Joseph T. Benthal, E. Michelle Southard‐Smith

и другие.

Current Protocols, Год журнала: 2022, Номер 2(5)

Опубликована: Май 1, 2022

Abstract In situ hybridization has been a robust method for detection of mRNA expression in whole‐mount samples or tissue sections more than 50 years. Recent technical advances have incorporated oligo‐based probes that attain greater penetration and signal amplification steps with restricted localization visualization specific mRNAs within single cells. One such is third‐generation chain reaction (V3HCR). Here, we report an optimized protocol V3HCR gene using sectioned frozen tissues from mouse human on microscope slides. Our methods modifications cryosectioning, fixation, processing over three‐day are detailed along recommendations aliquoting storing single‐stranded DNA hairpin amplifiers. addition, describe blocking background lipofuscin, highly autofluorescent material widespread neurons often complicates imaging efforts. After testing multiple strategies reduction determined application lipofuscin quencher dye compatible V3HCR, contrast to other like cupric sulfate quenching Sudan Black B cause loss. This adaptation enables neuronal populations otherwise problematic due autofluorescence. © 2022 Wiley Periodicals LLC. Basic Protocol : Mouse fresh‐frozen slides Support Aliquoting HCR hairpins

Язык: Английский

Процитировано

2

Gene expression analysis of the Xenopus laevis early limb bud proximodistal axis DOI Creative Commons

Daniel T. Hudson,

Jessica S. Bromell,

R. C. Day

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2022, Номер unknown

Опубликована: Май 4, 2022

Abstract Background Limb buds develop as bilateral outgrowths of the lateral plate mesoderm and are patterned along three axes. Current models proximal to distal patterning early amniote limb suggest that two signals, a organising signal from apical epithelial ridge (AER, Fgfs) an opposing (retinoic acid) act on pattern this axis. Results Transcriptional analysis stage 51 Xenopus laevis hindlimb sectioned proximal-distal axis, showed region is distinct rest limb. Expression capn8 . 3 , novel calpain, was located in cells immediately flanking AER. The Wnt antagonist Dkk1 AER-specific limbs. Two transcription factors, sall1 zic5 were expressed mesenchyme. Zic 5 has no described association with development. We also describe expression genes, gata5 tnn not previously associated Differentially genes Fgf, retinoic acid (RA) signalling well differential cell adhesion proliferation. Conclusions identify new candidate for proximodistal patterning. Our RA-regulated supports role transient RA gradients bud proximal-to-distal anamniote model organism.

Язык: Английский

Процитировано

1