VIRAL METAGENOMIC SURVEY OF CASPIAN SEALS DOI
Kobey Karamendin, Simon J. Goodman,

Yermukhammet Kasymbekov

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Июль 14, 2024

Abstract Viral diseases of pinnipeds cause substantial mortality and morbidity can influence population demography. metagenomic studies therefore play an important role in pinniped health assessments disease surveillance relevant to both individual species a ‘One Health’ context. This study used approach with high throughput sequencing make the first assessment viral diversity Caspian seals ( Pusa caspica ), only marine mammal endemic Sea. Sequencing libraries from 35 sampled 2009-2020 were analysed, finding sequences families Picornaviridae, Adenoviridae, Circoviridae, Herpesviridae, Papillomaviridae, Caliciviridae, Orthomyxoviridae, Anelloviridae, Smacoviridae, Cruciviridae Parvoviridae . The similarity contigs seal those recovered other ranged 63.74% (San Miguel sea lion calicivirus) 78.79% (Seal anellovirus 4). Some may represent novel species, but overall, repertoire is similar available viromes pinnipeds. Among partial for influenza B, representing second such molecular identification mammals. work provides foundation further communities seals, more generally, contributes data risk

Язык: Английский

Epizootic outbreak of influenza A / H5N1 among wild and farm birds in the vicinity of Komsomolsk‐on‐Amur in the autumn of 2022 DOI Creative Commons
Shchelkanov MIu, M. N. Dunaeva, Alexey A. Belik

и другие.

South of Russia ecology development, Год журнала: 2025, Номер 19(4), С. 41 - 56

Опубликована: Янв. 22, 2025

Aim of the work was to investigate an epizootic outbreak in vicinity Komsomolsk‐on‐Amur (Khabarovsk Territory) October 2022 among wild and agricultural birds.Material methods included analysis data, pathologic anatomical examination carcasses dead birds, collection field material its transportation laboratory without breaking cold chain, indication influenza A virus RNA using real‐time PCR, isolation viral strains on a model developing chicken embryos with subsequent assessment activity hemagglutination reaction infectious titer swine embryo kidney cell line, sequencing complete genome isolated nanopore Sanger technologies followed by bioinformatics procedures.Results obtained show that epizootics birds began February mass death chickens at Komsomolskaya poultry farm accompanied vicinity. Using molecular genetic diagnostic it found etiological agent H5 subtype. Seven were isolated, which allowed them be classified as highly pathogenic variants subgroup 2.3.4.4b H5N1 subtype.Conclusions: East Asia including Russian Far retains status center diversity H5Nx virus, where circulates local bird populations there is high probability reassortations between different virus. Such situation requires constant vigilance part supervisory authorities, strict compliance requirements biological safety institutions organizations engaged agriculture environmental management well regular ecological virological monitoring region.

Язык: Английский

Процитировано

0

Highly pathogenic avian influenza virus (H5N5) detected in an Atlantic walrus ( Odobenus rosmarus rosmarus ) in the Svalbard Archipelago, Norway, 2023 DOI Creative Commons
Alexander Postel, Nele Gremmel, Christian Lydersen

и другие.

Emerging Microbes & Infections, Год журнала: 2025, Номер unknown

Опубликована: Янв. 27, 2025

We present the first documented case of highly pathogenic avian influenza virus (HPAIV) subtype H5N5 in an Atlantic walrus (Odobenus rosmarus rosmarus). The animal was found dead Svalbard, Norway, 2023. Sequence analysis revealed highest genetic similarity with isolates from different hosts.

Язык: Английский

Процитировано

0

Systematic Review on CyanoHABs in Central Asia and Post-Soviet Countries (2010–2024) DOI Creative Commons

Kakima Kastuganova,

Galina Nugumanova,

Natasha S. Barteneva

и другие.

Toxins, Год журнала: 2025, Номер 17(5), С. 255 - 255

Опубликована: Май 20, 2025

Cyanobacterial harmful blooms (CyanoHABs) in lakes, estuaries, and freshwater reser-voirs represent a significant risk to water authorities worldwide due their cyanotoxins economic impacts. The duration, spread, severity of CyanoHABs have markedly increased over the past decades. article addresses CyanoHABs, cyanotoxins, monitoring methodologies post-Soviet Central Asian countries. This particular region was selected for systematic review its relative lack representation global reporting, particularly Asia. main aim this analyze primary literature available from 2010–2024 examine current situation CyanoHAB detection, monitoring, management Asia Following detailed database search several data-bases (Google Scholar, Pubmed, Web Science (WOS), Scopus, Elibrary, ENU, KazNU) along with additional hand searching citation searching, 121 articles reporting 214 local cyanobacterial bloom cases were review. Aquatic reported bodies eight countries, including high concentrations microcystins that often exceeded reference values established by World Health Organization (WHO). Advancing efforts Baltic Belarus, Russian Federation differed only few reports. However, aquatic ecosystems are especially threatened rising anthropogenic pressures (i.e., use, intensive agriculture, pollution), climate change, adequate ecological surveillance. We hypothesize recent Caspian seal mass mortality events been caused combination infection (viral or bacterial) exposure algal neurotoxins resulting Pseudo-nitzschia. conclude there is an urgent need improve assessment

Язык: Английский

Процитировано

0

Viral metagenomic survey of Caspian seals DOI Creative Commons
Kobey Karamendin, Simon J. Goodman,

Yermukhammet Kasymbekov

и другие.

Frontiers in Veterinary Science, Год журнала: 2024, Номер 11

Опубликована: Сен. 18, 2024

Introduction Viral diseases of pinnipeds cause substantial mortality and morbidity can influence population demography. metagenomic studies therefore play an important role in pinniped health assessments disease surveillance relevant to both individual species a “One Health” context. Methods This study used approach with high throughput sequencing make the first assessment viral diversity Caspian seals ( Pusa caspica ), only marine mammal endemic Sea. Results Sequencing libraries from 35 sampled 2009–2020 were analysed, finding sequences families Circoviridae, Parvoviridae, Herpesviridae, Papillomaviridae, Picornaviridae, Caliciviridae, Cruciviridae, Anelloviridae, Smacoviridae, Orthomyxoviridae, additional detection Adenoviridae via PCR. The similarity contigs seal recovered other ranged 63.74% (San Miguel sea lion calicivirus) 78.79% (Seal anellovirus 4). Discussion Some findings represent novel species, but overall, repertoire is similar available viromes pinnipeds. Among partial for influenza B, representing second such molecular identification mammals. work provides foundation further communities seals, more generally, contributes data risk

Язык: Английский

Процитировано

1

Vaccination of endangered wildlife as a conservation tool: Hindsights and new horizons in the pandemic era DOI
Frances M. D. Gulland,

Michelle Barbieri,

Sarah Cleaveland

и другие.

Biological Conservation, Год журнала: 2024, Номер 300, С. 110842 - 110842

Опубликована: Ноя. 12, 2024

Язык: Английский

Процитировано

1

VIRAL METAGENOMIC SURVEY OF CASPIAN SEALS DOI
Kobey Karamendin, Simon J. Goodman,

Yermukhammet Kasymbekov

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Июль 14, 2024

Abstract Viral diseases of pinnipeds cause substantial mortality and morbidity can influence population demography. metagenomic studies therefore play an important role in pinniped health assessments disease surveillance relevant to both individual species a ‘One Health’ context. This study used approach with high throughput sequencing make the first assessment viral diversity Caspian seals ( Pusa caspica ), only marine mammal endemic Sea. Sequencing libraries from 35 sampled 2009-2020 were analysed, finding sequences families Picornaviridae, Adenoviridae, Circoviridae, Herpesviridae, Papillomaviridae, Caliciviridae, Orthomyxoviridae, Anelloviridae, Smacoviridae, Cruciviridae Parvoviridae . The similarity contigs seal those recovered other ranged 63.74% (San Miguel sea lion calicivirus) 78.79% (Seal anellovirus 4). Some may represent novel species, but overall, repertoire is similar available viromes pinnipeds. Among partial for influenza B, representing second such molecular identification mammals. work provides foundation further communities seals, more generally, contributes data risk

Язык: Английский

Процитировано

0