Frontiers in Plant Science,
Год журнала:
2022,
Номер
13
Опубликована: Апрель 26, 2022
Microorganisms
have
dynamic
and
complex
interactions
with
their
hosts.
Diverse
microbial
communities
residing
near,
on,
within
the
plants,
called
phytobiome,
are
an
essential
part
of
plant
health
productivity.
Exploiting
citrus-associated
microbiomes
represents
a
scientific
approach
toward
sustained
environment-friendly
module
citrus
production,
though
periodically
exposed
to
several
threats,
Huanglongbing
(HLB)
predominantly
being
most
influential.
Exploring
composition
function
microbiome,
possible
redesigning
under
HLB
disease
pressure
has
sparked
renewed
interest
in
recent
times.
A
concise
account
various
achievements
understanding
niche
environments
viz.,
rhizosphere,
phyllosphere,
endosphere,
core
microbiota
alongside
functional
attributes
been
thoroughly
reviewed
presented.
Efforts
were
also
made
analyze
actual
role
microbiome
soil
fertility
resilience,
interaction
suppression
invading
pathogens
along
native
consequences
thereupon.
Despite
desired
potential
counter
different
pathogenic
diseases,
utilizing
for
beneficial
applications
at
field
level
is
yet
be
translated
as
commercial
product.
We
anticipate
that
advancement
multiomics
technologies,
high-throughput
sequencing
culturing,
genome
editing
tools,
artificial
intelligence,
consortia
will
provide
some
exciting
avenues
research
manipulation
improve
productivity
plants.
Global Change Biology,
Год журнала:
2022,
Номер
28(7), С. 2169 - 2182
Опубликована: Янв. 3, 2022
In
this
concept
paper,
we
propose
a
new
view
on
soil
organic
matter
(SOM)
formation:
microorganisms
use
most
of
the
organics
entering
as
energy
rather
than
source
carbon
(C),
while
SOM
accumulates
residual
by-product
because
microbial
investment
in
its
decomposition
exceeds
gain.
During
initial
stages
decomposition,
nominal
oxidation
state
C
(NOSC)
remaining
litter
decreases,
and
content
increases.
This
reflects
rapid
mineralization
available
compounds
with
positive
neutral
NOSC
(carboxylic
acids,
sugars,
some
amino
acids).
Consequently,
drops
to
-0.3
units,
rate
decreases
due
relative
accumulation
aromatic
aliphatic
(which
are
hydrolized
later)
entombment
necromass.
Ultimately,
incompletely
decomposed
plant
residues
will
have
1%-2.5%
more
per
unit
litter.
The
linear
decrease
density
broad
range
substances
by
106
kJ
mol-1
upon
is
supported
experimental
data
decomposition.
Preferential
recycling
energy-rich
reduced
(lipids,
aromatics,
certain
sugars)
degradation
oxidized
acids)
also
energetically
enrich
SOM.
Despite
high
content,
availability
stored
lower
explains
why
not
fully
mineralized
(thermodynamically
unfavorable),
especially
absence
provide
(e.g.,
bare
soil).
Energy
from
activates
decomposers
mine
nutrients
(the
main
ecological
function
priming
effects)
nutrient
2-5
times
higher
that
results
only
0.4%-5%
year-1
litter-derived
being
sequestered
SOM,
whereas
stores
1%-10%
total
energy.
Thus,
captured
photosynthesis
reason
utilize
matter,
whereby
merely
storage
mediator
fluxes.
The Innovation Geoscience,
Год журнала:
2023,
Номер
1(1), С. 100015 - 100015
Опубликована: Янв. 1, 2023
<p>The
sustainability
of
life
on
Earth
is
under
increasing
threat
due
to
human-induced
climate
change.
This
perilous
change
in
the
Earth's
caused
by
increases
carbon
dioxide
and
other
greenhouse
gases
atmosphere,
primarily
emissions
associated
with
burning
fossil
fuels.
Over
next
two
three
decades,
effects
change,
such
as
heatwaves,
wildfires,
droughts,
storms,
floods,
are
expected
worsen,
posing
greater
risks
human
health
global
stability.
These
trends
call
for
implementation
mitigation
adaptation
strategies.
Pollution
environmental
degradation
exacerbate
existing
problems
make
people
nature
more
susceptible
In
this
review,
we
examine
current
state
from
different
perspectives.
We
summarize
evidence
Earth’s
spheres,
discuss
emission
pathways
drivers
analyze
impact
health.
also
explore
strategies
highlight
key
challenges
reversing
adapting
change.</p>
Abstract
Elucidating
complex
interactions
between
bacteria
and
fungi
that
determine
microbial
community
structure,
composition,
functions
in
soil,
as
well
regulate
carbon
(C)
nutrient
fluxes,
is
crucial
to
understand
biogeochemical
cycles.
Among
the
various
interactions,
competition
for
resources
main
factor
determining
adaptation
niche
differentiation
these
two
big
groups
soil.
This
because
C
energy
limitations
growth
are
a
rule
rather
than
an
exception.
Here,
we
review
demands
of
fungi—the
major
kingdoms
soil—the
mechanisms
their
other
resources,
leading
differentiation,
global
change
impacts
on
this
competition.
The
normalized
utilization
preference
showed
1.4–5
times
more
efficient
uptake
simple
organic
compounds
substrates,
whereas
1.1–4.1
effective
utilizing
compounds.
Accordingly,
strongly
outcompete
while
take
advantage
Bacteria
also
compete
with
products
released
during
degradation
substrates.
Based
specifics,
differentiated
spatial,
temporal,
chemical
niches
will
increase
under
five
changes
including
elevated
CO2,
N
deposition,
soil
acidification,
warming,
drought.
Elevated
warming
bacterial
dominance,
acidification
drought
fungal
competitiveness.
Global Change Biology,
Год журнала:
2023,
Номер
29(24), С. 7131 - 7144
Опубликована: Окт. 19, 2023
Plant
communities
strongly
influence
soil
microbial
and,
in
turn,
carbon
(C)
cycling.
Microbial
use
efficiency
(CUE)
is
an
important
parameter
for
predicting
C
accumulation,
yet
how
plant
and
community
traits
CUE
remains
poorly
understood.
Here,
we
determined
influenced
by
traits,
studying
a
natural
gradient
of
species
diversity
subtropical
forest.
Our
results
showed
that
increased
with
increasing
tree
diversity,
suggesting
correlation
between
storage.
The
specific
properties
explained
the
greatest
variation
were
associated
(biomass,
enzyme
activities
ratio
oligotrophic
to
copiotrophic
taxa);
there
weaker
correlations
plant-input
properties,
chemistry
organic
quality
its
mineral
protection.
Overall,
high
was
correlated
diversity:
higher
substrate
availability
(simple
SOM
chemical
structures
weak
associations)
growth
rates
despite
dominance
strategists.
point
mechanism
which
may
increase
forest
sink
affecting
community.
Global Change Biology,
Год журнала:
2023,
Номер
29(22), С. 6170 - 6187
Опубликована: Авг. 30, 2023
Abstract
Carbon
use
efficiency
(CUE)
is
being
intensively
applied
to
quantify
carbon
(C)
cycling
processes
from
microbial
cell
global
scales.
Energy
(EUE)
at
least
as
important
the
CUE
because
(i)
microorganisms
organic
C
mainly
an
energy
source
and
not
elemental
per
se,
(ii)
growth
maintenance
are
limited
by
energy,
but
a
structural
element.
We
conceptualize
review
importance
of
EUE
soil
focus
on
content
in
compounds
depending
nominal
oxidation
state
(NOSC),
approaches
assess
EUE,
(iii)
similarities
differences
between
(iv)
discuss
mechanisms
responsible
for
lower
compared
CUE.
The
atom
(enthalpy
combustion,
total
stored
compound)
very
closely
(R
2
=
0.98)
positively
related
NOSC
increases
108
kJ
mol
−1
one
unit.
For
first
time
we
assessed
biomass
(−0.52)
calculated
corresponding
−510
C.
linked
considering
element
compositions
substrates
utilized
microorganisms.
mean
(0.32–0.35)
18%
than
(0.41)
using
glucose
substrate.
This
definitely
indicates
that
relative
Based
comparison
broad
range
utilization
maintenance,
well
database
experimental
various
compounds,
clearly
explained
five
main
factors
why
two
behind
versus
are:
recycling:
can
be
microbially
recycled,
whereas
always
only
once,
chemical
reduction
inorganic
compounds:
used
reduction,
which
ongoing
without
utilization.
Soil Biology and Biochemistry,
Год журнала:
2024,
Номер
193, С. 109396 - 109396
Опубликована: Март 9, 2024
Roots
and
the
associated
soil
directly
affected
by
root
activity,
termed
rhizosphere,
have
both
been
extensively
studied
recognized
for
their
crucial
role
in
functioning.
The
formation
of
rhizosphere
is
primarily
driven
effect
roots
on
shaping
physical
structure
soil,
which
turn
has
direct
feedbacks
interactions
between
physical,
biological
chemical
processes.
As
a
result,
hot
spot
microbial
cycling
nutrients
turnover
organic
matter.
Despite
pivotal
controlling
processes,
we
still
lack
quantitative
description
understanding
interrelationships
root-systems
creation
stabilization
structure.
We
provide
comprehensive
review
current
knowledge
novel
insights
into
processes
that
drive
rhizosphere.
These
are
regulated
multiple
indirect
pathways,
involving
growth,
production
rhizodeposits
hairs,
as
well
activity
microorganisms
fauna.
Further,
highlight
may
persist
evolve
after
death
to
an
extent
currently
largely
unknown.
Finally,
identify
five
pertinent
challenges
should
be
addressed
fully
apprehend
thus
harness
potential
resilience
plant-soil
interactions.
include
refining
structural
assessment
sampling
rhizosheaths,
examining
in-situ
bridging
gap
solid
phase
pore
scale
research.
In
our
view,
overcoming
these
obstacles
can
accomplished
combining
power
imaging
isotopic
approaches,
especially
at
field
scale,
encompassing
diverse
soils
plant
species.
ultimate
objective
future
research
upscale
conducting
more
experiments
concert
with
modeling
efforts,
under
umbrella
collaborative
interdisciplinary
Nature Communications,
Год журнала:
2024,
Номер
15(1)
Опубликована: Сен. 14, 2024
Expanding
and
intensifying
agriculture
has
led
to
a
loss
of
soil
carbon.
As
agroecosystems
cover
over
40%
Earth's
land
surface,
they
must
be
part
the
solution
put
in
action
mitigate
climate
change.
Development
efficient
management
practices
maximize
carbon
retention
is
currently
limited,
part,
by
poor
understanding
how
plants,
which
input
soil,
microbes,
determine
its
fate
there,
interact.
Here
we
implement
diversity
gradient
intercropping
undersown
species
with
barley
large
field
trial,
ranging
from
one
eight
species.
We
find
that
increasing
plant
strengthens
positive
associations
within
rhizosphere
microbial
community
relation
negative
associations.
These
associations,
turn,
enhance
use
efficiency.
Jointly,
our
results
highlight
can
used
as
strategy
potential
agricultural
soils.
SOIL,
Год журнала:
2025,
Номер
11(1), С. 105 - 119
Опубликована: Янв. 30, 2025
Abstract.
Substantial
input
of
exogenous
organic
matter
(EOM)
may
be
required
to
offset
the
projected
decline
in
soil
carbon
(SOC)
stocks
croplands
caused
by
global
warming.
However,
information
on
effectivity
EOM
application
dose
preserving
SOC
is
surprisingly
limited.
Therefore,
we
set
up
a
90
d
incubation
experiment
with
large
volumes
(sandy
loam
and
silt
loam)
compare
mineralization
(13C-labelled
ryegrass)
as
function
three
doses
(0.5,
1.5,
5
g
dry
kg−1
soil).
The
percentage
mineralized
was
expected
increase
linearly
higher
sandy
level
off
due
limited
O2
supply
order
maintain
aerobic
microbial
activity.
In
soil,
not
affected
dose,
while
increased
proportionally
an
increasing
(+49.6
mg
C
g−1
EOM).
Likewise,
formation
biomass
proportional
suggesting
no
reduction
growth
efficiency
at
concentration.
decreasing
tendency
apparent
but
could
confirmed
statistically.
We
therefore
conclude
that,
loam,
proportion
rate
than
(+117.2
Consistently
this
lack
response
EH
did
decrease
indicating
limitations.
both
soils,
possibly
supplied
energy
for
enzyme
production,
which,
turn,
stimulated
native
(i.e.
co-metabolism).
observed
stimulation
macroporosity
might
have
contributed
sustaining
conditions
mineralization.
sum,
our
previous
research
suggest
that
mostly
independent
modulates
SOC.
Provisional
balances
compared
unamended
controls
indicated
low
doses,
less
remained
when
added
normal
or
high
effect
found
soil.
These
findings
tentatively
indicate
using
larger
help
preserve
more
EOM-C,
longer-term
confirmation
field
will
firstly
before
can
draw
any
conclusion
management.