Research Square (Research Square),
Год журнала:
2023,
Номер
unknown
Опубликована: Май 25, 2023
Abstract
Date
palm
(
Phoenix
dactylifera
L.)
is
cultivated
mainly
in
arid
and
semiarid
regions
of
the
south
southwest
Iran.
Sixty-nine
Iranian
genotypes
were
selected
from
13
populations.
One
Moroccan
genotype
was
also
included
experiment.
The
sampled
Azizabad
agro-research
station
Kerman
province,
number
alleles
per
locus
ranged
5
to
10,
totaling
65.
Polymorphism
information
content
(PIC)
varied
6
30%,
averaging
at
19.4%.
highest
lowest
values
effective
found
(Ne
=
1.49)
Bushehr
1.15),
respectively.
value
Shannon
index
(I
40%)
polymorphic
loci
percentage
(PL
67.69%)
detected
‘Kerman’
population.
A
high
degree
genetic
diversity
‘Hormozgan’
population
(He
0.26)
.
correlation
coefficient
(r
0.983)
observed
between
Hormozgan.
Based
on
Nei’s
identity,
first
two
principal
coordinates
(PCoA)
showed
that
populations
Fars,
Morocco,
classified
as
three
separate
groups,
unlike
Kerman,
Hormozgan,
Khuzestan,
Persian
Gulf
Basin
(PGB)
In
addition,
bilateral
charts
relatedness
among
illustrated
by
STRUCTURE
software,
which
divided
70
date
into
seven
groups.
grouping
did
not
correlate
with
their
geographical
distribution.
Thus,
Q-values
grouped
most
them
mixed.
It
seems
a
lack
clear
separation
because
shared
background.
To
assist
future
crossing
programs,
our
findings
ISSR
markers
prioritized
several
male
stocks
palm.
Cold Spring Harbor Perspectives in Biology,
Год журнала:
2024,
Номер
16(12), С. a041445 - a041445
Опубликована: Март 4, 2024
Joshua
V.
Peñalba1,
Anna
Runemark2,
Joana
I.
Meier3,4,
Pooja
Singh5,6,
Guinevere
O.U.
Wogan7,
Rosa
Sánchez-Guillén8,
James
Mallet9,
Sina
J.
Rometsch10,11,
Mitra
Menon12,
Ole
Seehausen5,6,
Jonna
Kulmuni13,14,16
and
Ricardo
Pereira15,16
1Museum
für
Naturkunde,
Leibniz
Institute
for
Evolution
Biodiversity
Science,
Center
Integrative
Discovery,
10115
Berlin,
Germany
2Department
of
Biology,
Lund
University,
22632
Lund,
Sweden
3Tree
Life,
Wellcome
Sanger
Institute,
Hinxton,
Cambridgeshire
CB10
1SA,
United
Kingdom
4Department
Zoology,
University
Cambridge,
CB2
3EJ,
5Department
Aquatic
Ecology,
Ecology
Evolution,
Bern,
3012
Switzerland
6Center
&
Biogeochemistry,
Swiss
Federal
Science
Technology
(EAWAG),
CH-8600
Kastanienbaum,
7Department
Oklahoma
State
Stillwater,
74078,
USA
8Red
de
Biología
Evolutiva,
INECOL,
Xalapa,
Veracruz,
CP
91073,
Mexico
9Organismal
Evolutionary
Harvard
Massachusetts
02138,
10Department
Yale
New
Haven,
Connecticut
06511,
11Yale
Biospheric
Studies,
12Department
California
Davis,
95616,
13Department
Population
Ecosystem
Dynamics,
Amsterdam,
1098
XH
The
Netherlands
14Organismal
Biology
Research
Programme,
Helsinki,
Biocenter
3,
Finland
15Department
Museum
Natural
History
Stuttgart,
Stuttgart
70191,
Correspondence:
ricardojn.pereira{at}gmail.com
↵16
These
authors
contributed
equally
to
this
work.
Annals of Botany,
Год журнала:
2024,
Номер
133(7), С. 997 - 1006
Опубликована: Фев. 2, 2024
Abstract
Background
and
Aims
The
duckweeds
(Lemnaceae)
consist
of
36
species
exhibiting
impressive
phenotypic
variation,
including
the
progressive
evolutionary
loss
a
fundamental
plant
organ,
root.
Loss
roots
reduction
vascular
tissues
in
recently
derived
taxa
occur
concert
with
genome
expansions
≤14-fold.
Given
paired
structural
complexity
taxa,
we
focus
on
evolution
ionome
(whole-plant
elemental
contents)
context
these
changes
body
plan.
We
expect
that
vestigiality
eventual
might
have
both
adaptive
maladaptive
consequences
are
hitherto
unknown.
Methods
quantified
ionomes
34
accessions
21
across
all
duckweed
genera,
spanning
70
Myr
this
rapidly
cycling
(doubling
times
as
rapid
~24
h).
related
micro-
macroevolutionary
contrasts
to
plan
remodelling
showed
nimble
microevolutionary
shifts
accumulation
exclusion
novel
accessions.
Key
Results
observed
robust
directional
trend
calcium
magnesium
levels,
decreasing
from
ancestral
representative
Spirodela
genus
towards
rootless
Wolffia,
latter
also
accumulating
cadmium.
identified
abundant
within-species
variation
hyperaccumulators
specific
elements,
extensive
at
fine
(as
opposed
broad)
scale.
Conclusions
These
data
underscore
impact
root
reveal
very
scale
hyperaccumulation
wide
range
elements.
Broadly,
they
point
trade-offs
not
well
recognized
ionomes.
Evolutionary Applications,
Год журнала:
2025,
Номер
18(2)
Опубликована: Фев. 1, 2025
Although
many
tree
species
frequently
hybridize
and
backcross,
management
decisions
in
forestry
nature
conservation
are
usually
concentrated
on
pure
species.
Therefore,
understanding
which
environmental
factors
drive
the
distribution
admixture
of
a
local
stand
scale
is
great
interest
to
support
decision-making
establishment
resilient
forests.
Here,
we
extensively
sampled
mixed
hybridizing
white
oaks
(Quercus
petraea
Q.
pubescens)
near
Lake
Neuchâtel
(Switzerland),
where
limestone
glacier
moraine
geologies
coexist
proximity,
test
whether
micro-environmental
conditions
can
predict
taxonomic
genetic
admixture.
We
collected
DNA
from
bud
tissue,
individual
soil
samples,
extracted
high-resolution
topographic
data
for
385
oak
trees.
used
50
species-discriminatory
single
nucleotide
polymorphism
(SNP)
markers
determine
composition
levels
trees
tested
their
association
with
conditions.
show
that
trees'
be
explained
mainly
by
geographic
position,
pH,
potential
rooting
depth,
proxy
water
availability.
found
admixed
individuals
tend
grow
habitats
characteristic
more
drought-tolerant
pubescens
rather
than
intermediate
habitats.
Using
situ
measurements,
first
fine-scale
variation
properties
related
pH
availability
potentially
drives
stand.
Microenvironmental
therefore
promotes
diversity,
facilitates
adaptive
introgression,
contributes
resilience
forests
under
change.
Consequently,
such
as
should
managed
protected
complex
The Plant Journal,
Год журнала:
2025,
Номер
122(2)
Опубликована: Апрель 1, 2025
SUMMARY
The
section
Alatae
of
genus
Lemna
the
monocotyledonous
aquatic
duckweed
family
(Lemnaceae)
consists
rather
diverse
accessions
with
unknown
phylogeny
and
unclear
taxonomic
assignment.
In
contrast
to
other
duckweeds,
some
accessions,
in
addition
mainly
vegetative
propagation,
produce
readily
flowers
viable
seeds.
We
analyzed
genomic
diversity
phylogenetic
relationship
52
accessions.
For
this
purpose,
we
applied
multiple
molecular
cytogenetic
approaches,
including
plastid
nuclear
sequence
polymorphisms,
chromosome
counting,
genome
size
determination,
situ
hybridization
combination
geographic
distribution.
uncovered
ploidy
variation,
recurrent
hybridization,
backcrosses
between
species
their
hybrids.
latter
successfully
spread
over
three
continents.
results
elucidate
evolution
explain
difficult
assignment
distinct
Our
study
might
be
an
example
for
analogous
studies
resolve
hitherto
relationships
among
genera
Wolffiella
Wolffia
.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Авг. 9, 2024
Abstract
Interspecific
hybridization
and
polyploidization
are
recognized
as
two
main
driving
forces
in
plant
evolution,
shaping
genomes
favoring
evolutionary
novelty
ecological
adaptation.
Recent
studies
have
demonstrated
within
the
genus
Lemna
(Lemnaceae
Martinov).
minor
has
given
rise
to
interspecific
hybrids:
×
japonica
,
a
species
since
1980,
newly
discovered
L
.
mediterranea
identified
among
germplasm
collection
clones.
hybrid
between
gibba
was
hypothesized
correspond
symmeter
which
invalidly
described
about
50
years
ago
Southern
Italy.
A
sampling
campaign
eight
populations
of
hybrid,
at
different
sites
across
Campania
region,
The
isolated
specimens
were
found
be
genetically
identical
by
nuclear
marker
Tubulin-based
polymorphism
(TBP),
likely
belonging
same
original
clone
(LER-LME)
distinct
from
previously
analyzed
clones,
suggesting
recurrent
hybridization.
natural
is
triploid,
with
plastid
donor.
Morphology
very
similar
although
typical
gibbosity
this
becomes
evident
only
upon
flower
induction.
Flowers
protogynous
self-sterile.
Populations
both
parent
species,
recovered
during
survey,
recording
high
genetic
variability
minor.
Other
Lemnaceae
Wolffia
arrhiza
trisulca
also
occasionally
present.
presence
invasive
minuta
seems
less
prevalent
respect
other
Italian
regions.
Synthesis:
Five
cryptic
for
first
time
wild
Clones
these
populations,
sampled
water
bodies
over
an
area
4200
Km
2
indistinguishable
originated
event.
Thanks
intron
polymorphism,
TBP
provides
straightforward
method
identifying
sterile
clonal
lineages
tracking
their
spatial
temporal
distribution.
Ecological
factors
including
competition
parental
niche
climate
change
adaptation,
stability
space
investigated.
Frontiers in Plant Science,
Год журнала:
2023,
Номер
14
Опубликована: Июль 6, 2023
It
is
now
well
recognised
that
closely
related
species
can
hybridize
and
exchange
genetic
material,
which
may
promote
or
oppose
adaptation
speciation.
In
some
cases,
interspecific
hybridisation
very
common,
making
it
surprising
identity
preserved
despite
active
gene
exchange.
The
genomes
of
most
eukaryotic
are
highly
heterogeneous
with
regard
to
density,
abundance
repetitive
DNA,
chromatin
compactisation
etc,
make
certain
genomic
regions
more
prone
resistant
introgression
material
from
other
species.
Heterogeneity
in
local
recombination
rate
underpins
many
the
observed
patterns
across
genome
(e.g.
actively
recombining
typically
rich
depleted
for
DNA)
strongly
affect
permeability
introgression.
larger
region
lacking
recombination,
higher
chance
presence
incompatibility
gene(s)
region,
entire
non-
rarely
block
impermeable
Large
plant
tend
have
landscape,
frequently
occurring
at
ends
chromosomes
central
recombination.
this
paper
we
review
relationship
between
plants
argue
large
likely
play
a
major
role
preserving
hybridising
Molecular Ecology,
Год журнала:
2024,
Номер
33(13)
Опубликована: Июнь 7, 2024
Abstract
Human‐facilitated
introductions
of
nonnative
populations
can
lead
to
secondary
contact
between
allopatric
lineages,
resulting
in
lineage
homogenisation
or
the
formation
stable
hybrid
zones
maintained
by
reproductive
barriers.
We
investigated
patterns
gene
flow
native
Sacramento
Valley
red
fox
(
Vulpes
vulpes
patwin
)
and
introduced
conspecifics
captive‐bred
origin
California's
Central
Valley.
Considering
their
recent
divergence
(20–70
kya),
we
hypothesised
that
any
observed
barriers
were
primarily
driven
pre‐zygotic
(e.g.
behavioural
differences)
rather
than
post‐zygotic
reduced
fitness)
also
explored
whether
genes
could
confer
higher
fitness
human‐dominated
landscape
selective
introgression
into
population.
Genetic
analysis
foxes
n
=
682)
at
both
mitochondrial
(cytochrome
b
+
D‐loop)
nuclear
(19,051
SNPs)
loci
revealed
narrower
cline
widths
expected
under
a
simulated
model
unrestricted
flow,
consistent
with
existence
identified
several
previously
linked
domestic
canids,
supporting
pre‐zygotic,
yet
possibly
hereditary,
as
mechanism
driving
narrowness
stability
zone.
Several
elevated
from
population
associated
domestication
adaptation
landscapes.
This
study
contributes
our
understanding
hybridisation
dynamics
vertebrates,
particularly
context
species
changes,
underscoring
importance
considering
how
multiple
mechanisms
may
be
maintaining
lineages
subspecies
level.