Evaluation of diversity in selected populations of Iranian date palm (Phoenix dactylifera L.) using ISSR markers DOI Creative Commons

Fatemeh Khorshidi Jorjandi,

Sayed Mohammad Reza Khoshroo, Javad Farrokhi Toolir

и другие.

Research Square (Research Square), Год журнала: 2023, Номер unknown

Опубликована: Май 25, 2023

Abstract Date palm ( Phoenix dactylifera L.) is cultivated mainly in arid and semiarid regions of the south southwest Iran. Sixty-nine Iranian genotypes were selected from 13 populations. One Moroccan genotype was also included experiment. The sampled Azizabad agro-research station Kerman province, number alleles per locus ranged 5 to 10, totaling 65. Polymorphism information content (PIC) varied 6 30%, averaging at 19.4%. highest lowest values effective found (Ne = 1.49) Bushehr 1.15), respectively. value Shannon index (I 40%) polymorphic loci percentage (PL 67.69%) detected ‘Kerman’ population. A high degree genetic diversity ‘Hormozgan’ population (He 0.26) . correlation coefficient (r 0.983) observed between Hormozgan. Based on Nei’s identity, first two principal coordinates (PCoA) showed that populations Fars, Morocco, classified as three separate groups, unlike Kerman, Hormozgan, Khuzestan, Persian Gulf Basin (PGB) In addition, bilateral charts relatedness among illustrated by STRUCTURE software, which divided 70 date into seven groups. grouping did not correlate with their geographical distribution. Thus, Q-values grouped most them mixed. It seems a lack clear separation because shared background. To assist future crossing programs, our findings ISSR markers prioritized several male stocks palm.

Язык: Английский

The Role of Hybridization in Species Formation and Persistence DOI
Joshua V. Peñalba, Anna Runemark, Joana I. Meier

и другие.

Cold Spring Harbor Perspectives in Biology, Год журнала: 2024, Номер 16(12), С. a041445 - a041445

Опубликована: Март 4, 2024

Joshua V. Peñalba1, Anna Runemark2, Joana I. Meier3,4, Pooja Singh5,6, Guinevere O.U. Wogan7, Rosa Sánchez-Guillén8, James Mallet9, Sina J. Rometsch10,11, Mitra Menon12, Ole Seehausen5,6, Jonna Kulmuni13,14,16 and Ricardo Pereira15,16 1Museum für Naturkunde, Leibniz Institute for Evolution Biodiversity Science, Center Integrative Discovery, 10115 Berlin, Germany 2Department of Biology, Lund University, 22632 Lund, Sweden 3Tree Life, Wellcome Sanger Institute, Hinxton, Cambridgeshire CB10 1SA, United Kingdom 4Department Zoology, University Cambridge, CB2 3EJ, 5Department Aquatic Ecology, Ecology Evolution, Bern, 3012 Switzerland 6Center & Biogeochemistry, Swiss Federal Science Technology (EAWAG), CH-8600 Kastanienbaum, 7Department Oklahoma State Stillwater, 74078, USA 8Red de Biología Evolutiva, INECOL, Xalapa, Veracruz, CP 91073, Mexico 9Organismal Evolutionary Harvard Massachusetts 02138, 10Department Yale New Haven, Connecticut 06511, 11Yale Biospheric Studies, 12Department California Davis, 95616, 13Department Population Ecosystem Dynamics, Amsterdam, 1098 XH The Netherlands 14Organismal Biology Research Programme, Helsinki, Biocenter 3, Finland 15Department Museum Natural History Stuttgart, Stuttgart 70191, Correspondence: ricardojn.pereira{at}gmail.com ↵16 These authors contributed equally to this work.

Язык: Английский

Процитировано

15

A survey of duckweed species in Southern Italy provided first distribution records of the hybrid Lemna × mediterranea in nature DOI Creative Commons
Leone Ermes Romano, Luca Braglia, Maria Adelaide Iannelli

и другие.

Perspectives in Plant Ecology Evolution and Systematics, Год журнала: 2025, Номер unknown, С. 125863 - 125863

Опубликована: Март 1, 2025

Язык: Английский

Процитировано

1

The evolution of the duckweed ionome mirrors losses in structural complexity DOI Creative Commons
Kellie E. Smith,

Min Zhou,

Paulina Flis

и другие.

Annals of Botany, Год журнала: 2024, Номер 133(7), С. 997 - 1006

Опубликована: Фев. 2, 2024

Abstract Background and Aims The duckweeds (Lemnaceae) consist of 36 species exhibiting impressive phenotypic variation, including the progressive evolutionary loss a fundamental plant organ, root. Loss roots reduction vascular tissues in recently derived taxa occur concert with genome expansions ≤14-fold. Given paired structural complexity taxa, we focus on evolution ionome (whole-plant elemental contents) context these changes body plan. We expect that vestigiality eventual might have both adaptive maladaptive consequences are hitherto unknown. Methods quantified ionomes 34 accessions 21 across all duckweed genera, spanning 70 Myr this rapidly cycling (doubling times as rapid ~24 h). related micro- macroevolutionary contrasts to plan remodelling showed nimble microevolutionary shifts accumulation exclusion novel accessions. Key Results observed robust directional trend calcium magnesium levels, decreasing from ancestral representative Spirodela genus towards rootless Wolffia, latter also accumulating cadmium. identified abundant within-species variation hyperaccumulators specific elements, extensive at fine (as opposed broad) scale. Conclusions These data underscore impact root reveal very scale hyperaccumulation wide range elements. Broadly, they point trade-offs not well recognized ionomes.

Язык: Английский

Процитировано

4

Fine‐Scale Variation in Soil Properties Promotes Local Taxonomic Diversity of Hybridizing Oak Species (Quercus spp.) DOI Creative Commons
F. J. P. Zimmermann, Oliver Reutimann, Andri Baltensweiler

и другие.

Evolutionary Applications, Год журнала: 2025, Номер 18(2)

Опубликована: Фев. 1, 2025

Although many tree species frequently hybridize and backcross, management decisions in forestry nature conservation are usually concentrated on pure species. Therefore, understanding which environmental factors drive the distribution admixture of a local stand scale is great interest to support decision-making establishment resilient forests. Here, we extensively sampled mixed hybridizing white oaks (Quercus petraea Q. pubescens) near Lake Neuchâtel (Switzerland), where limestone glacier moraine geologies coexist proximity, test whether micro-environmental conditions can predict taxonomic genetic admixture. We collected DNA from bud tissue, individual soil samples, extracted high-resolution topographic data for 385 oak trees. used 50 species-discriminatory single nucleotide polymorphism (SNP) markers determine composition levels trees tested their association with conditions. show that trees' be explained mainly by geographic position, pH, potential rooting depth, proxy water availability. found admixed individuals tend grow habitats characteristic more drought-tolerant pubescens rather than intermediate habitats. Using situ measurements, first fine-scale variation properties related pH availability potentially drives stand. Microenvironmental therefore promotes diversity, facilitates adaptive introgression, contributes resilience forests under change. Consequently, such as should managed protected complex

Язык: Английский

Процитировано

0

Development and characteristics of artificial interspecific hybridization between Tridacna maxima and T. crocea DOI
Jun Li, Haitao Ma, Yanping Qin

и другие.

Aquaculture Reports, Год журнала: 2025, Номер 41, С. 102694 - 102694

Опубликована: Фев. 15, 2025

Язык: Английский

Процитировано

0

Genome diversity and evolution of the duckweed section Alatae comprising diploids, polyploids, and interspecific hybrids DOI Creative Commons
Anton Stepanenko, Luca Braglia, Jörg Fuchs

и другие.

The Plant Journal, Год журнала: 2025, Номер 122(2)

Опубликована: Апрель 1, 2025

SUMMARY The section Alatae of genus Lemna the monocotyledonous aquatic duckweed family (Lemnaceae) consists rather diverse accessions with unknown phylogeny and unclear taxonomic assignment. In contrast to other duckweeds, some accessions, in addition mainly vegetative propagation, produce readily flowers viable seeds. We analyzed genomic diversity phylogenetic relationship 52 accessions. For this purpose, we applied multiple molecular cytogenetic approaches, including plastid nuclear sequence polymorphisms, chromosome counting, genome size determination, situ hybridization combination geographic distribution. uncovered ploidy variation, recurrent hybridization, backcrosses between species their hybrids. latter successfully spread over three continents. results elucidate evolution explain difficult assignment distinct Our study might be an example for analogous studies resolve hitherto relationships among genera Wolffiella Wolffia .

Язык: Английский

Процитировано

0

Genetic diversity of Pyrus pyraster (L.) Burgsd. and P. spinosa Forssk.: evidence of introgression from cultivated into wild pear populations DOI
Antonio Vidaković, Zlatko Šatović, Zlatko Liber

и другие.

Trees, Год журнала: 2024, Номер 38(5), С. 1297 - 1314

Опубликована: Авг. 22, 2024

Язык: Английский

Процитировано

3

A survey of duckweed species in southern Italy provided first occurrences of the hybridLemna×mediterraneain the wild DOI Creative Commons
Leone Ermes Romano, Luca Braglia, Maria Adelaide Iannelli

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Авг. 9, 2024

Abstract Interspecific hybridization and polyploidization are recognized as two main driving forces in plant evolution, shaping genomes favoring evolutionary novelty ecological adaptation. Recent studies have demonstrated within the genus Lemna (Lemnaceae Martinov). minor has given rise to interspecific hybrids: × japonica , a species since 1980, newly discovered L . mediterranea identified among germplasm collection clones. hybrid between gibba was hypothesized correspond symmeter which invalidly described about 50 years ago Southern Italy. A sampling campaign eight populations of hybrid, at different sites across Campania region, The isolated specimens were found be genetically identical by nuclear marker Tubulin-based polymorphism (TBP), likely belonging same original clone (LER-LME) distinct from previously analyzed clones, suggesting recurrent hybridization. natural is triploid, with plastid donor. Morphology very similar although typical gibbosity this becomes evident only upon flower induction. Flowers protogynous self-sterile. Populations both parent species, recovered during survey, recording high genetic variability minor. Other Lemnaceae Wolffia arrhiza trisulca also occasionally present. presence invasive minuta seems less prevalent respect other Italian regions. Synthesis: Five cryptic for first time wild Clones these populations, sampled water bodies over an area 4200 Km 2 indistinguishable originated event. Thanks intron polymorphism, TBP provides straightforward method identifying sterile clonal lineages tracking their spatial temporal distribution. Ecological factors including competition parental niche climate change adaptation, stability space investigated.

Язык: Английский

Процитировано

2

The role of recombination landscape in species hybridisation and speciation DOI Creative Commons
Edgar L. Y. Wong, Dmitry A. Filatov

Frontiers in Plant Science, Год журнала: 2023, Номер 14

Опубликована: Июль 6, 2023

It is now well recognised that closely related species can hybridize and exchange genetic material, which may promote or oppose adaptation speciation. In some cases, interspecific hybridisation very common, making it surprising identity preserved despite active gene exchange. The genomes of most eukaryotic are highly heterogeneous with regard to density, abundance repetitive DNA, chromatin compactisation etc, make certain genomic regions more prone resistant introgression material from other species. Heterogeneity in local recombination rate underpins many the observed patterns across genome (e.g. actively recombining typically rich depleted for DNA) strongly affect permeability introgression. larger region lacking recombination, higher chance presence incompatibility gene(s) region, entire non- rarely block impermeable Large plant tend have landscape, frequently occurring at ends chromosomes central recombination. this paper we review relationship between plants argue large likely play a major role preserving hybridising

Язык: Английский

Процитировано

6

Maintenance of a narrow hybrid zone between native and introduced red foxes (Vulpes vulpes) despite conspecificity and high dispersal capabilities DOI Creative Commons
Sophie Preckler‐Quisquater, Cate B. Quinn, Benjamin N. Sacks

и другие.

Molecular Ecology, Год журнала: 2024, Номер 33(13)

Опубликована: Июнь 7, 2024

Abstract Human‐facilitated introductions of nonnative populations can lead to secondary contact between allopatric lineages, resulting in lineage homogenisation or the formation stable hybrid zones maintained by reproductive barriers. We investigated patterns gene flow native Sacramento Valley red fox ( Vulpes vulpes patwin ) and introduced conspecifics captive‐bred origin California's Central Valley. Considering their recent divergence (20–70 kya), we hypothesised that any observed barriers were primarily driven pre‐zygotic (e.g. behavioural differences) rather than post‐zygotic reduced fitness) also explored whether genes could confer higher fitness human‐dominated landscape selective introgression into population. Genetic analysis foxes n = 682) at both mitochondrial (cytochrome b + D‐loop) nuclear (19,051 SNPs) loci revealed narrower cline widths expected under a simulated model unrestricted flow, consistent with existence identified several previously linked domestic canids, supporting pre‐zygotic, yet possibly hereditary, as mechanism driving narrowness stability zone. Several elevated from population associated domestication adaptation landscapes. This study contributes our understanding hybridisation dynamics vertebrates, particularly context species changes, underscoring importance considering how multiple mechanisms may be maintaining lineages subspecies level.

Язык: Английский

Процитировано

1