Genomics,
Год журнала:
2022,
Номер
114(3), С. 110356 - 110356
Опубликована: Март 29, 2022
Jack
(Artocarpus
heterophyllus)
is
a
multipurpose
fruit-tree
species
with
minimal
genomic
resources.
The
study
reports
developing
comprehensive
transcriptome
data
containing
80,411
unigenes
an
N50
value
of
1265
bp.
We
predicted
64,215
CDSs
from
the
and
annotated
functionally
categorized
them
into
biological
process
(23,230),
molecular
function
(27,149),
cellular
components
(17,284).
From
unigenes,
we
discovered
16,853
perfect
SSRs
192
distinct
repeat
motif
types
reiterating
4
to
22
times.
Besides,
identified
2741
TFs
69
TF
families,
53
miRNAs
19
conserved
miRNA
25,953
potential
lncRNAs,
placed
three
functional
eTMs
in
different
lncRNA-miRNA
pairs.
regulatory
networks
involving
genes,
TFs,
several
regulated
nodes
providing
insight
miRNAs'
gene
associations
transcription
factor-mediated
regulation.
comparison
expression
patterns
some
selected
vis-à-vis
their
corresponding
target
genes
showed
inverse
relationship
indicating
possible
miRNA-mediated
regulation
genes.
Frontiers in Nutrition,
Год журнала:
2022,
Номер
9
Опубликована: Авг. 10, 2022
The
growing
consumer
awareness
of
climate
change
and
the
resulting
food
sustainability
issues
have
led
to
an
increasing
adoption
several
emerging
trends.
Some
these
trends
been
strengthened
by
emergence
fourth
industrial
revolution
(or
Industry
4.0),
its
innovations
technologies
that
fundamentally
reshaped
transformed
current
strategies
prospects
for
production
consumption
patterns.
In
this
review
a
general
overview
revolutions
through
perspective
will
be
provided.
Then,
knowledge
base
regarding
acceptance
eight
traditional
animal-proteins
alternatives
(e.g.,
plant-based
foods
insects)
more
recent
cell-cultured
meat
3D-printed
foods)
updated.
A
special
focus
given
impact
digital
other
4.0
on
shift
toward
greener,
healthier,
sustainable
diets.
Emerging
promising
potential
promote
nutritious
animal-based
products.
This
literature
narrative
showed
are
largest
portion
alternative
proteins
but
intensive
research
is
being
done
with
sources
(notably
insects
animal
products).
Recent
technological
advances
likely
significant
roles
in
enhancing
sensory
nutritional
properties,
improving
perception
foods.
Thus,
new
predicted
continue
growing,
although
effort
should
made
make
products
convenient,
nutritious,
affordable,
market
them
consumers
positively
emphasizing
their
safety
benefits.
Frontiers in Plant Science,
Год журнала:
2023,
Номер
13
Опубликована: Фев. 15, 2023
The
consumption
of
healthy
food,
in
order
to
strengthen
the
immune
system,
is
now
a
major
focus
people
worldwide
and
essential
tackle
emerging
pandemic
concerns.
Moreover,
research
this
area
paves
way
for
diversification
human
diets
by
incorporating
underutilized
crops
which
are
highly
nutritious
climate-resilient
nature.
However,
although
foods
increases
nutritional
uptake,
bioavailability
nutrients
their
absorption
from
also
play
an
role
curbing
malnutrition
developing
countries.
This
has
led
on
anti-nutrients
that
interfere
with
digestion
proteins
foods.
Anti-nutritional
factors
crops,
such
as
phytic
acid,
gossypol,
goitrogens,
glucosinolates,
lectins,
oxalic
saponins,
raffinose,
tannins,
enzyme
inhibitors,
alkaloids,
β-
N
-oxalyl
amino
alanine
(BOAA),
hydrogen
cyanide
(HCN),
synthesized
crop
metabolic
pathways
interconnected
other
growth
regulation
factors.
Hence,
breeding
aim
completely
eliminating
anti-nutrition
tends
compromise
desirable
features
yield
seed
size.
advanced
techniques,
integrated
multi-omics,
RNAi,
gene
editing,
genomics-assisted
breeding,
breed
negative
traits
minimized
provide
new
strategies
handle
these
improvement
programs.
There
need
emphasize
individual
crop-based
approaches
upcoming
programs
achieve
smart
minimum
constraints
future.
review
focuses
progress
molecular
prospects
additional
improve
nutrient
crops.
Frontiers in Nutrition,
Год журнала:
2022,
Номер
9
Опубликована: Дек. 9, 2022
Nutritious
foods
are
essential
for
human
health
and
development.
However,
malnutrition
hidden
hunger
continue
to
be
a
challenge
globally.
In
most
developing
countries,
access
adequate
nutritious
food
continues
challenge.
Although
is
less
prevalent
in
developed
countries
compared
where
iron
(Fe)
zinc
(Zn)
deficiencies
common.
The
United
Nations
(UN)
2nd
Sustainable
Development
Goal
was
set
eradicate
hunger.
Hidden
has
led
numerous
cases
of
infant
maternal
mortalities,
greatly
impacted
growth,
development,
cognitive
ability,
physical
working
capacity.
This
influenced
several
develop
interventions
that
could
help
combat
Interventions
such
as
dietary
diversification
supplementation
being
adopted.
fortification
but
mainly
biofortification
been
projected
the
sustainable
solution
Plant-based
(PBFs)
form
greater
proportion
diets
certain
populations;
hence,
PBFs
relevant
combating
Agronomic
biofortification,
plant
breeding,
transgenic
approaches
some
currently
used
strategies
crops.
Crops
cereals,
legumes,
oilseeds,
vegetables,
fruits
have
biofortified
through
all
these
three
strategies.
approach
sustainable,
efficient,
rapid,
making
it
suitable
programs.
Omics
technology
also
introduced
improve
efficiency
approach.
Conservation Biology,
Год журнала:
2023,
Номер
37(4)
Опубликована: Янв. 27, 2023
Abstract
Genetic
diversity
within
species
represents
a
fundamental
yet
underappreciated
level
of
biodiversity.
Because
genetic
can
indicate
resilience
to
changing
climate,
its
measurement
is
relevant
many
national
and
global
conservation
policy
targets.
Many
studies
produce
large
amounts
genome‐scale
data
for
wild
populations,
but
most
(87%)
do
not
include
the
associated
spatial
temporal
metadata
necessary
them
be
reused
in
monitoring
programs
or
acknowledging
sovereignty
nations
Indigenous
peoples.
We
undertook
distributed
datathon
quantify
availability
these
missing
test
hypothesis
that
their
decays
with
time.
also
worked
remediate
by
extracting
from
published
papers,
online
repositories,
direct
communication
authors.
Starting
848
candidate
genomic
sets
(reduced
representation
whole
genome)
International
Nucleotide
Sequence
Database
Collaboration,
we
determined
561
contained
mostly
samples
populations.
successfully
restored
spatiotemporal
78%
(
n
=
440
on
45,105
individuals
762
17
phyla).
Examining
papers
repositories
was
much
more
fruitful
than
contacting
351
authors,
who
replied
our
email
requests
45%
Overall,
23%
queries
authors
unearthed
useful
metadata.
The
probability
retrieving
declined
significantly
as
age
set
increased.
There
13.5%
yearly
decrease
up
22%
were
only
available
This
rapid
decay
availability,
mirrored
other
types
biological
data,
should
motivate
swift
updates
data‐sharing
policies
researcher
practices
ensure
valuable
context
provided
lost
science
forever.
Frontiers in Plant Science,
Год журнала:
2023,
Номер
14
Опубликована: Апрель 14, 2023
Globally,
legumes
are
vital
constituents
of
diet
and
perform
critical
roles
in
maintaining
well-being
owing
to
the
dense
nutritional
contents
functional
properties
their
seeds.
While
much
emphasis
has
been
placed
on
major
grain
over
years,
neglected
underutilized
(NULs)
gaining
significant
recognition
as
probable
crops
alleviate
malnutrition
give
a
boost
food
security
Africa.
Consumption
these
associated
with
several
health-promoting
benefits
can
be
utilized
foods
due
rich
dietary
fibers,
vitamins,
polyunsaturated
fatty
acids
(PUFAs),
proteins/essential
amino
acids,
micro-nutrients,
bioactive
compounds.
Despite
plethora
benefits,
have
not
received
research
attention
compared
common
mainstream
legumes,
thus
hindering
adoption
utilization.
Consequently,
efforts
geared
toward
improvement,
utilization,
incorporation
into
agriculture
Africa
more
convincing
than
ever.
This
work
reviews
some
selected
NULs
(Adzuki
beans
(
Vigna
angularis
),
African
yam
bean
Sphenostylis
stenocarpa
Bambara
groundnut
subterranea
Jack
Canavalia
ensiformis
Kidney
Phaseolus
vulgaris
Lima
lunatus
Marama
Tylosema
esculentum
Mung
bean,
radiata
Rice
Umbellata
Winged
Psophocarpus
tetragonolobus
)),
nutritional,
properties.
Furthermore,
we
highlight
prospects
current
challenges
utilization
discusses
strategies
facilitate
exploitation
only
sources
nutrients,
but
also
integration
for
development
cheap
accessible
foods.
Plant Stress,
Год журнала:
2024,
Номер
11, С. 100366 - 100366
Опубликована: Янв. 17, 2024
African
agricultural
systems
are
now
in
crucial
need
to
assure
food
for
the
overgrowing
population.
To
meet
this
challenges,
we
better
way
identify
and
modify
key
proteins
genes
involved
yield
potential,
nutrient
value,
stress
tolerance
crops
like
maize,
sorghum,
soybeans,
cassava,
rice,
etc.
The
deep
understanding
of
metabolomics,
transcriptomics,
proteomics,
genomics
has
proven
be
a
useful
tool
increasing
crop
resilience
Africa.
However,
there
is
very
little
information
available
regarding
recent
use
omics
technology
increase
yields
This
review
provided
advances
plants
molecular
profiling
techniques
enhance
our
breeding
strategies
grown
study
will
plant
technologies
inform
strategies.
Journal of Crop Science and Biotechnology,
Год журнала:
2024,
Номер
27(3), С. 359 - 379
Опубликована: Фев. 26, 2024
Abstract
The
increase
in
global
population
which
translates
to
increased
demand
for
food
called
urgent
attention
from
key
players
and
policy
makers
agricultural
sector.
Also,
the
effects
of
climate
change
its
consequent
biotic
abiotic
stresses
plants
has
greatly
affect
sustainability
agriculture
production
food.
These
challenges
require
novel
sustainable
approaches
improve
quality
yield
crops.
vast
application
nanoparticles
different
fields
study
is
attributed
their
distinct
chemical
physical
characteristics.
However,
agriculture,
limited
because
safety
concern.
Currently,
research
tailored
response
various
nanoparticle
treatments;
however,
these
studies
are
inconclusive
due
knowledge
on
mechanisms
plant–nanoparticle
interactions.
Recently,
nanobiotechnology
have
taken
a
new
dimension
preliminary
bioassay
experiments
more
complex,
research-oriented
using
omics
tools.
Changes
protein
expression
caused
by
interaction
at
any
developmental
stages,
or
tissue
types
may
be
investigated
suitable
proteomics
techniques.
This
review
discussed
applications
nanotechnology
proteomic
tools
plant
growth
development.
Plant–nanoparticle
interactions
genetic
engineering
attain
also
discussed.
Informative
thorough
understanding
will
serve
as
blueprint
that
enable
scientist
engineers
develop
biomarkers
explore
potential
crop
improvement.
Frontiers in Plant Science,
Год журнала:
2021,
Номер
12
Опубликована: Дек. 1, 2021
Novel
crop
improvement
approaches,
including
those
that
facilitate
for
the
exploitation
of
wild
relatives
and
underutilized
species
harboring
much-needed
natural
allelic
variation
are
indispensable
if
we
to
develop
climate-smart
crops
with
enhanced
abiotic
biotic
stress
tolerance,
higher
nutritive
value,
superior
traits
agronomic
importance.
Top
among
these
approaches
“omics”
technologies,
genomics,
transcriptomics,
proteomics,
metabolomics,
phenomics,
their
integration,
whose
deployment
has
been
vital
in
revealing
several
key
genes,
proteins
metabolic
pathways
underlying
numerous
importance,
aiding
marker-assisted
breeding
major
species.
Here,
citing
relevant
examples,
appraise
our
understanding
on
recent
developments
omics
technologies
how
they
driving
quest
breed
climate
resilient
crops.
Large-scale
genome
resequencing,
pan-genomes
genome-wide
association
studies
identification
analysis
species-level
variations,
whilst
RNA-sequencing
driven
transcriptomics
provided
unprecedented
opportunities
conducting
response
studies.
Meanwhile,
single
cell
is
slowly
becoming
an
tool
decoding
cell-specific
responses,
although
technical
experimental
design
challenges
still
need
be
resolved.
Additionally,
refinement
conventional
techniques
advent
modern,
high-resolution
proteomics
necessitated
a
gradual
shift
from
general
descriptive
plant
protein
abundances
large
scale
protein-metabolite
interactions.
Especially,
metabolomics
currently
receiving
special
attention,
owing
role
metabolites
play
as
intermediates
close
links
phenotypic
expression.
Further,
high
throughput
phenomics
applications
targeting
new
research
domains
such
root
system
architecture
analysis,
exploration
root-associated
microbes
improved
health
resilience.
Overall,
coupling
multi-omics
modern
genetic
engineering
methods
ensures
all-encompassing
approach
developing
nutritionally-rich
productivity
can
sustainably
sufficiently
meet
current
future
food,
nutrition
energy
demands.