Dynamic Impact of One-Year Integrated Rice–Crayfish Farming on Bacterioplankton Communities in Paddy Water DOI Creative Commons
Yiran Hou, Quan Xu, Yanhong Yang

и другие.

Biology, Год журнала: 2024, Номер 13(12), С. 1059 - 1059

Опубликована: Дек. 17, 2024

As global food security issues become increasingly severe, an important innovation in agricultural production patterns, namely integrated rice–fish farming, has been widely implemented around the world, especially Asia. To assess impact of rice–crayfish (Procambarus clarkii) farming (IRCF) on ecosystems, we used Illumina high-throughput 16S rRNA gene sequencing to analyze differences diversity, composition, co-occurrence network, and assembly process planktonic bacterial communities paddy water between traditional rice (TRM) IRCF. Environmental factors were evaluated during tillering, jointing, flowering, grain-filling stages August 24, September 5, October 16, respectively. Our findings revealed that, throughout entire cultivation period, IRCF had no notable impacts bacterioplankton community diversity water, but it changed composition relative abundance dominant bacterioplankton. Specifically, promoted Chloroflexota tillering stage reduced its presence stage. It also significantly decreased Bacillota jointing while notably enhancing Actinomycetota flowering Furthermore, markedly improved robustness negative/positive cohesion within networks stages. altered processes shaping communities, promoting a greater dominance stochastic diminished dramatically aquatic environmental factors, particularly stage, by substantially increasing TN, ammonium, nitrate, phosphate levels water. These nutrient closely correlated with dynamics communities. underscore considerable potential stability growth providing valuable data theoretical insights into microbiological ecological agroecosystem.

Язык: Английский

Cultivating crayfish (Procambarus clarkii) significantly enhances the quantity and diversity of soil microorganisms: evidence from the comparison of rice-wheat and rice-crayfish rotation models DOI Creative Commons
Hui Xu, Dan Wang, Xuguang Li

и другие.

Frontiers in Microbiology, Год журнала: 2025, Номер 16

Опубликована: Фев. 3, 2025

Integrated farming of rice (IFA), as a time-honored agricultural model, can effectively increase productivity and provide ecological benefits. Rice-wheat rotation rice-crayfish ( Procambarus clarkii ) are two most widely applied IFA patterns in China. In this study, we compared the differences soil microbial communities predicted their functions these models by sequencing 16s rRNA analyzing bioinformation. The results showed that crayfish increased abundance diversity microorganisms. main differentially abundant phyla between groups were Actinobacteriota, Bacteroidota, Desulfobacterota, while genera Bacteroidetes_vadinHA17 , Sphingomonas Thiobacillus . Similarity Percentages (SIMPER) analysis indicated species also had highest contribution to composition groups. Random forest prediction was employed identify potential biomarkers distinguish communities. Spirochaetota identified biomarker phyla. Streptomyces Kribbella Paludibacter could serve genera. Functional Annotation Prokaryotic Taxa (FAPROTAX) revealed dominant bacterial rice-wheat model aerobic chemoheterotrophy chemoheterotrophy. contrast, more diverse, primarily including methylotrophy, human pathogens all methanotrophy. co-occurrence network enhanced modularity community, fewer nodes edges, which implying internal connections. conclusion, wheat planting drove significant paddy fields, with Actinobacteriota Desulfobacterota biomarkers. Compared cultivation, system incorporating richness functions, promoted presence keystone connecting roles. Our study would not only clarify effects different on communities, should valuable insights for future adjusting cropping controlling current problems.

Язык: Английский

Процитировано

0
Bacterial assemblies in acidic dryland vs. paddy soils across depth profiles in southern China's red soil region DOI
Xin Li,

Yun Ge,

Fangen Hu

и другие.

Pedobiologia, Год журнала: 2025, Номер unknown, С. 151034 - 151034

Опубликована: Фев. 1, 2025

Язык: Английский

Процитировано

0
Alterations in Soil Bacterial Community and Its Assembly Process within Paddy Field Induced by Integrated Rice–Giant River Prawn (Macrobrachium rosenbergii) Farming DOI Creative Commons
Yiyun Zhang, Yiran Hou, Rui Jia

и другие.

Agronomy, Год журнала: 2024, Номер 14(8), С. 1600 - 1600

Опубликована: Июль 23, 2024

Integrated rice–aquatic animal farming has become a vital strategy for enhancing food security. To assess the effects of integrated rice–giant river prawn (Macrobrachium rosenbergii) (IRPF) on agricultural ecosystems, we used 16S rRNA gene sequencing to analyze soil bacterial communities in comparison with traditional rice monoculture (RM). Our study revealed that IRPF did not significantly affect diversity community. However, during initial culture stage, markedly increased relative abundance phylum candidate division NC10 and genus Candidatus Methylomirabilis, nitrogen-cycling-related functions within Additionally, reduced complexity stability these early middle stages. While stochastic processes usually dominate assembly communities, restricted migration influence processes. Furthermore, had significant impact environmental factors paddy soils, strongly correlating shifts particularly through variations nitrite concentration. In conclusion, community soils was primarily observed stages, impacts were driven by changes, especially These findings provide theoretical insights reference understanding microbiological different rice–fish systems ecosystems.

Язык: Английский

Процитировано

2
Dynamic Impact of One-Year Integrated Rice–Crayfish Farming on Bacterioplankton Communities in Paddy Water DOI Creative Commons
Yiran Hou, Quan Xu, Yanhong Yang

и другие.

Biology, Год журнала: 2024, Номер 13(12), С. 1059 - 1059

Опубликована: Дек. 17, 2024

As global food security issues become increasingly severe, an important innovation in agricultural production patterns, namely integrated rice–fish farming, has been widely implemented around the world, especially Asia. To assess impact of rice–crayfish (Procambarus clarkii) farming (IRCF) on ecosystems, we used Illumina high-throughput 16S rRNA gene sequencing to analyze differences diversity, composition, co-occurrence network, and assembly process planktonic bacterial communities paddy water between traditional rice (TRM) IRCF. Environmental factors were evaluated during tillering, jointing, flowering, grain-filling stages August 24, September 5, October 16, respectively. Our findings revealed that, throughout entire cultivation period, IRCF had no notable impacts bacterioplankton community diversity water, but it changed composition relative abundance dominant bacterioplankton. Specifically, promoted Chloroflexota tillering stage reduced its presence stage. It also significantly decreased Bacillota jointing while notably enhancing Actinomycetota flowering Furthermore, markedly improved robustness negative/positive cohesion within networks stages. altered processes shaping communities, promoting a greater dominance stochastic diminished dramatically aquatic environmental factors, particularly stage, by substantially increasing TN, ammonium, nitrate, phosphate levels water. These nutrient closely correlated with dynamics communities. underscore considerable potential stability growth providing valuable data theoretical insights into microbiological ecological agroecosystem.

Язык: Английский

Процитировано

0