Exploring Protein Functions of Gut Bacteriome and Mycobiome in Thai Infants Associated with Atopic Dermatitis Through Metaproteomic and Host Interaction Analysis DOI Open Access

Thanawit Chantanaskul,

Preecha Patumcharoenpol, Sittiruk Roytrakul

и другие.

International Journal of Molecular Sciences, Год журнала: 2024, Номер 25(24), С. 13533 - 13533

Опубликована: Дек. 18, 2024

Atopic dermatitis (AD), a prevalent allergic skin condition in children, has been closely associated with imbalances the gut microbiome. To investigate these microbial alterations and their functional implications, we investigated protein expression, functions interactions of bacteriome mycobiome as well human proteome Thai infants AD using integrative metaproteomic host interaction analysis. As observed, probiotic species, such Lactobacillus acidophilus Bacteroides salyersiae, were reduced abundance group while key pathogenic bacteria fungi, Streptococcus constellatus Penicillium chrysogenum, increased abundance. Additionally, analysis expressed proteins was enriched response to stress DNA repair ribosome biogenesis-related processes group, potentially reactive oxygen species (ROS), intestinal inflammation, fungal growth dysbiosis. Further, protein–protein (PPIs) network incorporating revealed 10 signature related immune system AD. Our findings propose between microbes infants. our knowledge, this study serves first framework for monitoring bacteriome–mycobiome–human studies other diseases

Язык: Английский

Recent advances in virulence of a broad host range plant pathogen Sclerotinia sclerotiorum: a mini-review DOI Creative Commons

Yangyi Zhu,

Chenghong Wu,

Y.P. Deng

и другие.

Frontiers in Microbiology, Год журнала: 2024, Номер 15

Опубликована: Июнь 19, 2024

Sclerotinia sclerotiorum is a typical necrotrophic plant pathogenic fungus, which has wide host range and can cause variety of diseases, leading to serious loss agricultural production around the world. It difficult control completely eliminate characteristics, chemical methods not ideal. Therefore, it very important know mechanism S. for improving living environment, relieving pressure promoting economic development. In this paper, life cycle introduced understand whole process infection. Through analysis mechanism, paper summarized reported content, mainly focused on oxalic acid, cell wall degrading enzyme effector protein in infection its mechanism. Besides, recent studies virulence-related genes have been paper. According analysis, those were related growth development hypha appressorium, signaling regulatory factors so on, further influence ability infect critically. The application host-induced gene silencing (HIGS)is considered as potential effective tool various fungi crops, provides an reference study pathogenesis green .

Язык: Английский

Процитировано

4

Deciphering Cargo Contents in Extracellular Vesicles of Candida haemulonii var. vulnera DOI Creative Commons
B. Oliveira, Tamires A. Bitencourt, Patrick Santos

и другие.

Computational and Structural Biotechnology Journal, Год журнала: 2025, Номер unknown

Опубликована: Апрель 1, 2025

Язык: Английский

Процитировано

0

Trans-Kingdom sRNA Silencing in Sclerotinia sclerotiorum for Crop Fungal Disease Management DOI Creative Commons
Yan Ouyang,

Yunong Xia,

Xianyu Tang

и другие.

Pathogens, Год журнала: 2025, Номер 14(4), С. 398 - 398

Опубликована: Апрель 21, 2025

Sclerotinia sclerotiorum is a globally widespread and vast destructive plant pathogenic fungus that causes significant yield losses in crops. Due to the lack of effective resistant germplasm resources, control diseases caused by S. largely relies on chemical fungicides. However, excessive use these chemicals not only environmental concerns but also leads increased development resistance sclerotiorum. In contrast, trans-kingdom sRNA silencing-based technologies, such as host-induced gene silencing (HIGS) spray-induced (SIGS), offer novel, effective, environmentally friendly methods for management infection. This review summarizes recent advances identification genes, target selection, categories, application RNA interference (RNAi) technologies targeting this pathogen. Although some challenges, including off-target effects efficiency external uptake, exist, findings have proposed solutions further improvement. Combined with latest developments CRISPR/Cas editing other RNAi has potential become crucial tool sclerotinia stem rot (SSR), mitigating impact crop production.

Язык: Английский

Процитировано

0

LRR Receptor-like Protein in Rapeseed Confers Resistance to Sclerotinia sclerotiorum Infection via a Conserved SsNEP2 Peptide DOI Open Access

Chenghuizi Yang,

Weiping Zhong,

Wei Li

и другие.

International Journal of Molecular Sciences, Год журнала: 2025, Номер 26(10), С. 4569 - 4569

Опубликована: Май 10, 2025

Brassica napus is one of the most extensively cultivated oilseed crops in China, but its yield significantly impacted by stem rot caused Sclerotinia sclerotiorum. Receptor-like proteins (RLPs) and receptor-like kinases (RLKs) play essential roles plant-pathogen interactions; however, their regulatory mechanisms remain largely unknown B. napus. In this study, we investigated function leucine-rich repeat protein BnaRLP-G13-1 immunity. Previous observations indicated that plants expressing exhibited enhanced resistance to We hypothesized mediates pathogen recognition immune signaling. To test this, employed mitogen-activated kinase (MAPK) activity assays, transgenic overexpression analyses, infection assays. Our results demonstrated recognizes conserved necrosis- ethylene-inducing peptide Ssnlp24SsNEP2 derived from S. sclerotiorum, triggering MAPK cascades subsequent responses. Furthermore, interaction studies revealed physically interacts with BnaSOBIR1, which for full antifungal defense activation. These elucidate molecular basis BnaRLP-G13-1-mediated immunity, providing insights into improving disease crops.

Язык: Английский

Процитировано

0

The Sclerotinia sclerotiorum ADP-Ribosylation Factor 6 Plays an Essential Role in Abiotic Stress Response and Fungal Virulence to Host Plants DOI Open Access

Kunmei Wang,

Siyi Wang, Ting Wang

и другие.

Опубликована: Ноя. 20, 2023

The ADP-ribosylation factor 6 (Arf6), as the only member of Arf family III protein, has been extensively studied for its diverse biological functions in animals. Previously, Arf6 protein Magnaporthe oryzae was found to be crucial endocytosis and polarity establishment during asexual development. However, role remains unclear Sclerotinia sclerotiorum. Here, we identified characterized SsArf6 S. sclerotiorum using a reverse genetic approach. Deletion impaired hyphal growth development, produced more branches. Interestingly, knockout enhanced tolerance oxidative stress but sensitivity osmotic stress, increased melanin accumulation, indicative different roles various responses. Moreover, appressorium formation severely impaired, fungal virulence host plants significantly reduced. Overall, our findings demonstrate essential responses, formation, plants.

Язык: Английский

Процитировано

3

The Sclerotinia sclerotiorum ADP-Ribosylation Factor 6 Plays an Essential Role in Abiotic Stress Response and Fungal Virulence to Host Plants DOI Creative Commons

Kunmei Wang,

Siyi Wang, Ting Wang

и другие.

Journal of Fungi, Год журнала: 2023, Номер 10(1), С. 12 - 12

Опубликована: Дек. 25, 2023

The ADP-ribosylation factor 6 (Arf6), as the only member of Arf family III protein, has been extensively studied for its diverse biological functions in animals. Previously, Arf6 protein Magnaporthe oryzae was found to be crucial endocytosis and polarity establishment during asexual development. However, role remains unclear S. sclerotiorum. Here, we identified characterized SsArf6 sclerotiorum using a reverse genetic approach. Deletion impaired hyphal growth development produced more branches. Interestingly, knockout resulted an augmented tolerance towards oxidative stress, increased sensitivity osmotic indicative different roles various stress responses. Simultaneously, deletion led elevation melanin accumulation. Moreover, appressorium formation severely impaired, fungal virulence host plants significantly reduced. Overall, our findings demonstrate essential development, responses, formation, plants.

Язык: Английский

Процитировано

1

Deciphering Cargo Contents in Extracellular Vesicles ofCandida haemuloniivar.vulnera DOI Creative Commons

Bianca T. M. Oliveira,

Tamires A. Bitencourt, Patrick Santos

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Авг. 13, 2024

ABSTRACT Candida haemulonii comprises a group of pathogenic fungi known for their resistance to primary antifungal treatments. Infections caused by these pathogens present substantial challenges due the difficulties in accurate identification. Extracellular vesicles (EVs) released play critical role pathogen-host interaction, potentially influencing and virulence. Previous research our indicates that EVs contain immunogenic particles capable impacting host’s immune response. Understanding composition is crucial elucidating mechanisms underlying virulence C. var. vulnera . This study aims investigate contents from using proteomic microRNA sequencing tools, providing insights into adaptation, survival, progression infections. Our findings reveal key proteins transported EVs, including BMH1, TEF1, CDC19, PDC11. These are involved various cellular processes, such as alteration cell wall structure, biofilm formation, facilitation morphological changes, among others. Additionally, we observed miRNA-like molecules within linked electron transport chain regulation citric acid cycle, which metabolic processes associated with factors rapid adaptation diverse hosts or environments. In this context, provide novel perspective on fungal highlighting potential targets therapies. Therefore, may reflect expression levels regulatory pathogenicity, IMPORTANCE The complex holds clinical significance its notable conventional therapies inherent specific focuses cargo fungi, an essential interactions, pathogenicity. can modulate Proteomic analyses have identified miRNAs adjustment, modulation cytoplasmic functions. components offers underscoring therapeutic intervention. By , enhances understanding pathogenicity emerging yeast.

Язык: Английский

Процитировано

0

Transcriptomic and protein analysis of Trametes versicolor interacting with a Hypholoma fasciculare mycelium foraging in soil DOI Creative Commons
Grace H. Attrill, Lynne Boddy,

Ed Dudley

и другие.

Fungal ecology, Год журнала: 2024, Номер 72, С. 101385 - 101385

Опубликована: Сен. 27, 2024

Язык: Английский

Процитировано

0

Exploring Protein Functions of Gut Bacteriome and Mycobiome in Thai Infants Associated with Atopic Dermatitis Through Metaproteomic and Host Interaction Analysis DOI Open Access

Thanawit Chantanaskul,

Preecha Patumcharoenpol, Sittiruk Roytrakul

и другие.

International Journal of Molecular Sciences, Год журнала: 2024, Номер 25(24), С. 13533 - 13533

Опубликована: Дек. 18, 2024

Atopic dermatitis (AD), a prevalent allergic skin condition in children, has been closely associated with imbalances the gut microbiome. To investigate these microbial alterations and their functional implications, we investigated protein expression, functions interactions of bacteriome mycobiome as well human proteome Thai infants AD using integrative metaproteomic host interaction analysis. As observed, probiotic species, such Lactobacillus acidophilus Bacteroides salyersiae, were reduced abundance group while key pathogenic bacteria fungi, Streptococcus constellatus Penicillium chrysogenum, increased abundance. Additionally, analysis expressed proteins was enriched response to stress DNA repair ribosome biogenesis-related processes group, potentially reactive oxygen species (ROS), intestinal inflammation, fungal growth dysbiosis. Further, protein–protein (PPIs) network incorporating revealed 10 signature related immune system AD. Our findings propose between microbes infants. our knowledge, this study serves first framework for monitoring bacteriome–mycobiome–human studies other diseases

Язык: Английский

Процитировано

0