Agronomy,
Год журнала:
2024,
Номер
14(8), С. 1689 - 1689
Опубликована: Июль 31, 2024
The
regeneration
of
plant
somatic
cells
is
a
prerequisite
for
their
biological
breeding.
Identification
key
genes
controlling
embryogenic
callus
(EC)
differentiation
and
investigation
the
genetic
mechanism
cell
fate
determination
are
important
improving
variety.
In
this
study,
we
used
maize
inbred
line
KN5585
its
gene-edited
mutants
Zmprx19-1,
Zmprx19-2
Zmprx19-3
as
materials.
Three
regeneration-related
traits,
induction
rate
(EIR),
green
(GCR)
plantlet
(PRR),
were
identified
by
tissue
culture
immature
embryos.
Additionally,
ECs
at
different
stages
(0
d,
5
10
d
15
d)
subjected
to
RNA-seq,
comparative
transcriptome
analyses
performed.
results
showed
that
traits
all
highly
significantly
lower
than
those
wild
type
(p
<
0.01).
PRR
value
was
75.25%,
while
highest
only
15.08%,
indicating
knockdown
ZmPRX19
inhibited
EC
regeneration.
Transcriptome
sequencing
yielded
total
200.30
Gb
clean
data
from
24
libraries,
with
an
average
6.53
per
library.
Mutant
wild-type
gene
expression
compared
separately
four
stages,
689
common
differentially
expressed
(DEGs)
screened.
WGCNA
classify
these
into
nine
modules,
which
subsequently
GO
KEGG
enrichment
analyses.
total,
40,
23,
17
(q
0.05)
enriched
in
hormone
signal
transduction,
MAPK
signaling
pathway-plant,
phenylpropanoid
biosynthesis
photosynthesis,
respectively.
Moreover,
protein–protein
interaction
(PPI)
network
analysis
revealed
five
MAPKKK17_18
hub
nodes
involved
may
be
ECs.
above
provide
basis
final
elucidation
molecular
Frontiers in Plant Science,
Год журнала:
2022,
Номер
13
Опубликована: Июнь 30, 2022
Plant
regeneration
occurs
when
plants
repair
or
replace
damaged
structures
based
on
the
totipotency
and
pluripotency
of
their
cells.
Tissue
culture
is
one
most
widely
used
regenerative
technologies.
Recently,
a
series
breakthroughs
were
made
in
study
plant
regeneration.
This
review
summarizes
two
pathways
tissue
culture:
somatic
embryogenesis
de
novo
organogenesis.
Furthermore,
we
environmental
factors
influencing
from
explant
sources,
basal
medium,
growth
regulators,
light/dark
treatment.
Additionally,
analyse
molecular
mechanisms
underlying
pathways.
knowledge
will
promote
an
understanding
fundamental
principles
precursor
cells
lay
solid
foundation
for
applying
micropropagation
genetic
modification.
Developmental Cell,
Год журнала:
2022,
Номер
57(4), С. 526 - 542.e7
Опубликована: Янв. 20, 2022
Highlights•The
dynamic
chromatin
state
landscape
during
shoot
regeneration
is
revealed•Collapse
of
pluripotency
in
the
absence
cytokinin
signaling•Generation
a
catalog
regulatory
sequences
regeneration•A
cohort
transcription
factors
involved
outlinedSummaryShoot
mediated
by
sequential
action
two
phytohormones,
auxin
and
cytokinin.
However,
landscapes
underlying
this
response
have
not
yet
been
studied.
In
study,
we
jointly
profiled
accessibility,
histone
modifications,
transcriptomes
to
demonstrate
that
high
auxin/cytokinin
ratio
environment
primes
Arabidopsis
increasing
accessibility
gene
loci
associated
with
fate
determination.
Cytokinin
signaling
only
triggers
commitment
progenitor
at
later
stages
but
also
allows
maintain
identity
genes
priming
stage.
Our
analysis
transcriptional
dynamics
further
identifies
cis-elements
dedicated
cell
transitions
uncovers
important
roles
BES1,
MYC,
IDD,
PIF
regeneration.
results,
thus,
provide
comprehensive
resource
for
studying
reprogramming
plants
potential
targets
improving
future
efficiency.Graphical
abstract
Plants,
Год журнала:
2021,
Номер
10(1), С. 185 - 185
Опубликована: Янв. 19, 2021
The
recent
legalization
of
Cannabis
sativa
L.
in
many
regions
has
revealed
a
need
for
effective
propagation
and
biotechnologies
the
species.
Micropropagation
affords
researchers
producers
methods
to
rapidly
propagate
insect-/disease-/virus-free
clonal
plants
store
germplasm
forms
basis
other
biotechnologies.
Despite
this
need,
research
area
is
limited
due
long
history
prohibitions
restrictions.
Existing
literature
multiple
limitations:
publications
use
hemp
as
proxy
drug-type
when
it
well
established
that
there
significant
genotype
specificity;
studies
using
cultivars
are
predominantly
optimized
single
cultivar;
most
protocols
have
not
been
replicated
by
independent
groups,
some
attempts
demonstrate
lack
reproducibility
across
genotypes.
Due
culture
decline
problems,
multiplication
phase
micropropagation
(Stage
2)
fully
developed
reports.
This
review
will
provide
brief
background
on
botany
comprehensive
critical
summary
tissue
culture.
Special
attention
be
paid
current
challenges
faced
researchers,
limitations
existing
studies,
developments
future
directions
technologies.
Frontiers in Plant Science,
Год журнала:
2022,
Номер
13
Опубликована: Май 4, 2022
For
maize
genome-editing
and
bioengineering,
genetic
transformation
of
inbred
genotypes
is
most
desired
due
to
the
uniformity
background
in
their
progenies.
However,
lines
are
recalcitrant
tissue
culture
transformation.
A
public,
transformable
B104
has
been
widely
used
for
genome
editing
recent
years.
This
primarily
its
high
degree
similarity
shared
with
B73,
an
reference
parent
many
breeding
populations.
Conventional
protocol
requires
16–22
weeks
produce
rooted
transgenic
plants
average
4%
frequency
(number
T0
per
100
infected
embryos).
In
this
Method
paper,
we
describe
advanced
that
only
7–10
generate
6.4%
frequency.
Over
66%
carried
CRISPR/Cas9-induced
indel
mutations
on
target
gene,
demonstrating
can
be
applications.
Following
detailed
stepwise
procedure
described
here,
quick
simplified
method
using
Agrobacterium
ternary
vector
system
consisting
a
T-DNA
binary
compatible
helper
plasmid
readily
transferable
interested
researchers.
This
review
discusses
the
DNA
and
RNA
methylation
pathways
their
biological
roles
in
Rosaceae
developmental
processes
relevant
for
breeding
production.
The
is
a
plant
family
of
great
importance
human
nutrition
health.
Many
traits
are
influenced
by
epigenetic
methylation,
functions
which
now
being
unravelled
several
important
species
this
family.
Methylation
at
5th
position
cytosine
(5mC)
well-established
mark
that
affects
cellular
such
as
gene
expression
genome
stability
involved
wide
range
functions.
Further
to
this,
recent
technological
advances
have
uncovered
other
naturally
occurring
chemical
modifications
additional
layers
regulatory
information
plants.
In
we
give
comprehensive
summary
5-methylcytosine
mechanisms
components
identified
We
detail
discuss
role
5mC
dynamics
processes,
including
phase
transition,
bud
development,
dormancy,
architecture,
regeneration,
fruit
ripening
senescence.
then
understanding
newly
nucleic
acid
modifications,
N6-adenosine
(6mA)
(m6A)
mechanisms.
summarise
adenosine
emerging
modification
development
findings
Rosaceous
species.
Integrating
aspects
with
genetics
physiology
crucial
aBIOTECH,
Год журнала:
2023,
Номер
4(1), С. 31 - 46
Опубликована: Янв. 16, 2023
Ever
since
the
concept
of
"plant
cell
totipotency"
was
first
proposed
in
early
twentieth
century,
plant
regeneration
has
been
a
major
focus
study.
Regeneration-mediated
organogenesis
and
genetic
transformation
are
important
topics
both
basic
research
modern
agriculture.
Recent
studies
model
Genes,
Год журнала:
2021,
Номер
12(2), С. 265 - 265
Опубликована: Фев. 12, 2021
The
ability
to
restore
or
replace
injured
tissues
can
be
undoubtedly
named
among
the
most
spectacular
achievements
of
plant
organisms.
One
such
regeneration
pathways
is
organogenesis,
formation
individual
organs
from
nonmeristematic
tissue
sections.
process
triggered
in
vitro
by
incubation
on
medium
supplemented
with
phytohormones.
Cytokinins
are
a
class
phytohormones
demonstrating
pleiotropic
effects
and
powerful
network
molecular
interactions.
present
study
reviews
existing
knowledge
possible
sequence
genetic
events
behind
de
novo
shoot
organogenesis
initiated
cytokinins.
Overall,
review
aims
collect
reactions
encompassed
cytokinin
primary
responses,
starting
phytohormone
perception
dedicated
receptors,
transcriptional
reprogramming
cell
fate
last
module
multistep-phosphorelays.
It
also
includes
brief
reminder
other
control
mechanisms,
as
epigenetic
reprogramming.
Frontiers in Plant Science,
Год журнала:
2022,
Номер
12
Опубликована: Фев. 8, 2022
Switchgrass
(Panicum
virgatum)
is
an
excellent
feedstock
for
biofuel
production.
While
genetic
transformation
routinely
done
in
lowland
switchgrass,
upland
cultivars
remain
recalcitrant
to
transformation.
Here
we
report
the
establishment
of
efficient
and
reproducible
protocol
two
cultivars,
'Summer'
'Blackwell',
by
ectopic
overexpression
morphogenic
genes,
Baby
boom
(Bbm)
Wuschel2
(Wus2).
Two
auxotrophic
Agrobacterium
strains,
LBA4404Thy-
EHA105Thy-,
each
harboring
same
construct
containing
ZmBbm,
ZmWus2,
a
green
fluorescence
protein
(GFP)
gene,
ZsGreen1,
were
used
infect
immature
leaf
segments
derived
from
vitro
grown
seedlings.
The
strains
also
contain
helper
plasmid
that
carry
additional
copies
virulence
genes.
GFP-expressing
calli
identified
selected
regeneration.
highest
efficiency
6%
was
obtained
tetraploid
cultivar
Summer
when
infection,
which
twice
octoploid
Blackwell.
consistently
outperformed
EHA105Thy-
on
frequency
across
cultivars.
Fifteen
randomly
putative
transgenic
plants
Blackwell,
representing
independent
callus
events,
confirmed
as
presence
transgene,
ZmAls,
absence
AtuFtsZ,
chromosomal
gene
specific
strain
LBA4404
using
polymerase
chain
reaction.
Transgene
integration
expression
further
detection
GFP
roots,
resistance
herbicide
injury
leaves
plants.
ZmBbm
ZmWus2
genes
successfully
removed
40
33.3%
respectively,
via
Cre-Lox
recombination
system
upon
heat
treatment
embryogenic
calli.
Our
successful
switchgrass
provides
method
function
analysis
germplasm
enhancement
biotechnology.
G3 Genes Genomes Genetics,
Год журнала:
2024,
Номер
14(4)
Опубликована: Фев. 7, 2024
Abstract
Plant
regeneration
is
an
important
dimension
of
plant
propagation
and
a
key
step
in
the
production
transgenic
plants.
However,
capacity
varies
widely
among
genotypes
species,
molecular
basis
which
largely
unknown.
Association
mapping
methods
such
as
genome-wide
association
studies
(GWAS)
have
long
demonstrated
abilities
to
help
uncover
genetic
trait
variation
plants;
however,
performance
these
depends
on
accuracy
scale
phenotyping.
To
enable
large-scale
GWAS
planta
callus
shoot
model
tree
Populus,
we
developed
phenomics
workflow
involving
semantic
segmentation
quantify
regenerating
tissues
over
time.
We
found
that
resulting
statistics
were
highly
non-normal
distributions,
thus
employed
transformations
or
permutations
avoid
violating
assumptions
linear
models
used
GWAS.
report
200
statistically
supported
quantitative
loci
(QTLs),
with
genes
encompassing
near
top
QTLs
including
regulators
cell
adhesion,
stress
signaling,
hormone
signaling
pathways,
well
other
diverse
functions.
Our
results
encourage
hormonal
during
consider
keystone
roles
stress-related
(e.g.
jasmonates
salicylic
acid),
addition
auxin
cytokinin
pathways
commonly
considered.
The
putative
regulatory
biological
processes
identified
provide
new
insights
into
complexity
regeneration,
may
serve
reagents
for
improving
transformation
recalcitrant
species.