Frontiers in Immunology,
Год журнала:
2024,
Номер
15
Опубликована: Апрель 19, 2024
Background
The
transcription
factor,
SOX13
is
part
of
the
SOX
family.
proteins
are
crucial
in
progression
many
cancers,
and
some
correlate
with
carcinogenesis.
Nonetheless,
biological
clinical
implications
human
breast
cancer
(BC)
remain
rarely
known.
Methods
We
evaluated
survival
expression
data
BC
patients
via
UNLCAL,
GEPIA,
TIMER,
Kaplan-Meier
plotter
databases.
Immunohistochemistry
(IHC)
was
used
to
verify
specimens.
gene
alteration
rates
were
acquired
on
online
web
cBioportal.
With
aid
TCGA
data,
association
between
mRNA
copy
number
alterations
(CNA)
methylation
determined.
LinkedOmics
identify
genes
that
co-expressed
regulators.
Immune
infiltration
tumor
microenvironment
evaluations
assessed
by
ImmuCellAI
TIMER2.0
correlated
drug
resistance
analysis
performed
using
GDSC2
database.
Results
Higher
discovered
tissues
comparison
normal
tissues.
Moreover,
increased
mutation
amplification
found
BC.
Patients
levels
showed
worse
overall
(OS).
Cox
independently
served
as
a
prognostic
indicator
for
poor
Further,
also
confirmed
be
diverse
immune
cells.
In
terms
sensitivity
analysis,
we
higher
level
predicts
high
IC50
value
most
198
drugs
which
resistance.
Conclusion
present
findings
demonstrated
negatively
relates
prognosis
plays
an
important
role
immunity.
Therefore,
may
potentially
adopted
biomarker
predicting
Journal of Translational Medicine,
Год журнала:
2025,
Номер
23(1)
Опубликована: Янв. 9, 2025
The
most
common
malignant
type
of
kidney
cancer
is
clear
cell
renal
carcinoma
(ccRCC).
expression
levels
hyaluronan-mediated
motility
receptor
(HMMR)
in
many
tumor
types
are
significantly
elevated.
HMMR
closely
associated
with
tumor-related
progression,
treatment
resistance,
and
poor
prognosis,
has
yet
to
be
fully
investigated
terms
its
patterns
molecular
mechanisms
action
ccRCC.
Further
research
imperative
elucidate
these
aspects.
We
used
Cancer
Genome
Atlas
(TCGA)
database
preliminarily
investigate
function
ccRCC
the
data
for
19
samples
from
NCBI
GEO
(GSE207493)
single-cell
analysis.
assessed
differential
level
between
cancerous
tissues
their
matched
non-tumor
tissues.
Subsequently,
a
series
vivo
vitro
experiments
were
designed
biological
ccRCC,
including
Transwell
assays,
CCK-8
clone
formation
assays
subcutaneous
xenograft
nude
mice.
Through
bioinformatics
analysis,
we
identified
potential
microRNAs
(miRNAs)
that
may
regulate
HMMR,
as
well
possible
signaling
pathways
involved.
Finally,
conducted
cellular
functional
validate
our
hypotheses
regarding
axis.
was
up-regulated
patients,
elevated
showed
strong
correlation
progression
adverse
prognoses
patients.
Knocking
down
inhibited
proliferative
migratory
abilities
cells,
while
overexpression
amplified
oncogenic
properties.
In
mice
model,
reduced
proliferation
vivo.
Furthermore,
an
upstream
transcriptional
regulator,
miR-9-5p,
effectively
downregulated
thus
impeded
cells
migration.
might
influence
growth
via
Epithelial-Mesenchymal
Transition
(EMT)
pathway
Janus
Kinase
1/Signal
Transducer
Activator
Transcription
1
(JAK1/STAT1)
pathway.
overexpressed
there
significant
link
high
patient
prognosis.
Specifically,
could
targeted
by
miR-9-5p
modulate
tumorigenesis
through
both
EMT
JAK1/STAT1
Abstract
Background
Breast
cancer
is
the
most
common
malignant
tumor,
and
metastasis
remains
major
cause
of
poor
prognosis.
Glucose
metabolic
reprogramming
one
prominent
hallmarks
in
cancer,
providing
nutrients
energy
to
support
dramatically
elevated
tumor
growth
metastasis.
Nevertheless,
potential
mechanistic
links
between
glycolysis
breast
progression
have
not
been
thoroughly
elucidated.
Methods
RNA-seq
analysis
was
used
identify
glucose
metabolism-related
circRNAs.
The
expression
circSIPA1L3
tissues
serum
examined
by
qRT-PCR,
further
assessed
its
diagnostic
value.
We
also
evaluated
prognostic
analyzing
a
cohort
238
patients.
Gain-
loss-of-function
experiments,
transcriptomic
analysis,
molecular
biology
experiments
were
conducted
explore
biological
function
regulatory
mechanism
circSIPA1L3.
Results
Using
identified
as
critical
mediator
responsible
for
adaption
upon
stress.
revealed
that
exerted
stimulative
effect
on
glycolysis,
which
could
be
transported
exosomes
facilitated
behaviors
among
cells.
Significantly,
lactate
secretion
caused
circSIPA1L3-mediated
enhancement
promoted
recruitment
associated
macrophage
their
tumor-promoting
roles.
Mechanistically,
EIF4A3
induced
cyclization
cytoplasmic
export
circSIPA1L3,
inhibited
ubiquitin-mediated
IGF2BP3
degradation
through
enhancing
UPS7-IGF2BP3
interaction.
Furthermore,
increased
mRNA
stability
carrier
SLC16A1
intake
enhancer
RAB11A
either
strengthening
interaction
with
or
sponging
miR-665,
leading
enhanced
glycolytic
metabolism.
Clinically,
indicated
unfavorable
prognosis
base
Moreover,
highly
expressed
patients
exhibited
high
value
Conclusions
Our
study
highlights
oncogenic
role
mediating
metabolism,
might
serve
promising
biomarker
therapeutic
target
cancer.
Journal of Experimental & Clinical Cancer Research,
Год журнала:
2024,
Номер
43(1)
Опубликована: Апрель 16, 2024
Abstract
Background
Chemoresistance
and
immunosuppression
are
two
major
obstacles
in
the
current
anti-cancer
treatments.
This
study
investigates
involvements
of
a
CCAAT
enhancer
binding
protein
delta
(CEBPD)/vesicle
associated
membrane
3
(VAMP3)
axis
paclitaxel
(PTX)
resistance
immune
evasion
triple-negative
breast
cancer
(TNBC).
Methods
PTX
resistance-related
genes
were
screened
by
bioinformatics.
CEBPD
VAMP3
expression
clinical
TNBC
samples
was
examined
immunohistochemistry.
Three
PTX-resistant
cell
lines
(MDA-MB-231/PTX,
MDA-MB-468/PTX
MDA-MB-453/PTX)
generated,
their
drug
analyzed.
Autophagy
cells
analyzed
immunofluorescence
staining.
Interaction
between
promoter
identified
immunoprecipitation
luciferase
assays.
The
extracellular
programmed
death-ligand
1
(PD-L1)
detected.
Extracellular
vesicles
(EVs)
from
isolated
to
examine
effects
on
CD8
+
T
exhaustion.
Results
upregulated
chemo-resistant
tissue
cells.
downregulation
enhanced
sensitivity
However,
further
upregulation
restored
resistance,
which
likely
due
activation
autophagy,
as
autophagy
antagonist
chloroquine
found
bind
activate
its
transcription.
CEBPD/VAMP3
also
increased
PD-L1
conditioned
medium
cell-derived
EVs
exhaustion
co-cultured
Conclusion
provides
novel
evidence
that
plays
key
role
enhancing
across
various
subtypes
through
VAMP3-mediated
activation.
Additionally,
increases
level,
delivered
EVs,
suppress
cell-mediated
anti-tumor
response.
These
significant
observations
may
provide
new
insights
into
treatment
TNBC,
suggesting
promising
targets
overcome
resistance.
Clinical and Translational Medicine,
Год журнала:
2025,
Номер
15(1)
Опубликована: Янв. 1, 2025
Abstract
C1QBP
exhibits
heightened
expression
across
a
spectrum
of
tumours,
thereby
fostering
their
proliferation
and
metastasis,
rendering
it
pivotal
therapeutic
target.
Nevertheless,
to
date,
no
pharmacological
agents
capable
directly
targeting
inducing
the
degradation
have
been
identified.
In
this
study,
we
unveiled
new
peptide,
PDBAG1,
derived
from
precursor
protein
GPD1,
employing
peptidomics‐based
drug
screening
strategy.
PDBAG1
has
demonstrated
substantial
efficacy
in
suppressing
triple‐negative
breast
cancer
(TNBC)
both
vitro
vivo.
Its
mechanism
action
involves
mitochondrial
impairment
inhibition
oxidative
phosphorylation
(OXPHOS),
achieved
through
direct
binding
C1QBP,
promoting
its
ubiquitin‐dependent
degradation.
Concomitantly,
due
metabolic
adaptability,
observed
an
up‐regulation
glycolysis
compensate
for
OXPHOS
inhibition.
We
aberrant
phenomenon
wherein
hypoxia
signalling
pathway
tumour
cells
exhibited
significant
activation
under
normoxic
conditions
following
treatment.
Through
size‐exclusion
chromatography
(SEC)
isothermal
titration
calorimetry
(ITC)
assays,
validated
that
is
with
K
d
value
334
nM.
Furthermore,
inhibits
homologous
recombination
repair
proteins
facilitates
synergism
poly‐ADP‐ribose
polymerase
inhibitors
therapy.
This
underscores
ultimately
induces
insurmountable
survival
stress
multiple
mechanisms
while
concurrently
engendering
vulnerabilities
specific
TNBC.
Key
points
The
newly
discovered
peptide
first
small
molecule
substance
found
target
degrade
demonstrating
inhibitory
effects
potential.
Journal of Experimental & Clinical Cancer Research,
Год журнала:
2025,
Номер
44(1)
Опубликована: Фев. 6, 2025
Abstract
Background
D-2-hydroxyglutarate
(D-2HG),
an
oncometabolite
derived
from
the
tricarboxylic
acid
cycle.
Previous
studies
have
reported
diverse
effects
of
D-2HG
in
pathophysiological
processes,
yet
its
role
breast
cancer
remains
largely
unexplored.
Methods
We
applied
advanced
biosensor
approach
to
detect
levels
samples.
then
investigated
biological
functions
through
multiple
vitro
and
vivo
assays.
A
joint
MeRIP-seq
RNA-seq
strategy
was
used
identify
target
genes
regulated
by
D-2HG-mediated
N6-methyladenosine
(m
6
A)
modification.
RNA
pull-down
assays
were
further
reader
that
could
specifically
recognize
m
modification
on
angiopoietin
like
4
(ANGPTL4)
mRNA
immunoprecipitation
confirm
findings.
Results
found
accumulated
triple-negative
(TNBC),
exerting
oncogenic
both
promoting
TNBC
cell
growth
metastasis.
Mechanistically,
enhanced
global
modifications
cells,
notably
upregulating
ANGPTL4
mRNA,
which
mediated
inhibition
Fat-mass
obesity-associated
protein
(FTO),
resulting
increased
recognition
A-modified
YTH
binding
F1
(YTHDF1),
thereby
translation
ANGPTL4.
As
a
secretory
protein,
subsequently
activated
integrin-mediated
JAK2/STAT3
signaling
cascade
cells
autocrine
signaling.
Notably,
knockdown
or
treatment
with
GLPG1087
(an
integrin
antagonist)
significantly
reduced
D-2HG-induced
proliferation
metastasis
cells.
Additionally,
promote
macrophage
M2
polarization
within
tumor
microenvironment
via
paracrine
signaling,
driving
progression.
The
association
poor
prognosis
patients
underscores
clinical
relevance.
Conclusions
Our
study
unveils
previously
unrecognized
for
progression
targeting
D-2HG/FTO/m
A/ANGPTL4/integrin
axis
can
serve
as
promising
therapeutic
patients.
Journal of Cellular and Molecular Medicine,
Год журнала:
2024,
Номер
28(13)
Опубликована: Июль 1, 2024
Abstract
Triple‐negative
breast
cancer
(TNBC)
is
often
considered
one
of
the
most
aggressive
subtypes
cancer,
characterized
by
a
high
recurrence
rate
and
low
overall
survival
(OS).
It
notorious
for
posing
challenges
related
to
drug
resistance.
While
there
has
been
progress
in
TNBC
research,
mechanisms
underlying
chemotherapy
resistance
remain
largely
elusive.
We
collect
single‐cell
RNA
sequencing
(scRNA‐seq)
data
from
five
patients
susceptible
resistant
cases.
Comprehensive
analyses
involving
copy
number
variation
(CNV),
pseudotime
trajectory,
cell–cell
interactions,
pseudospace
analysis,
as
well
transcription
factor
functional
enrichment
are
conducted
specifically
on
macrophages
malignant
cells.
Furthermore,
we
performed
validation
experiments
clinical
samples
using
multiplex
immunofluorescence.
identified
subset
SPP1
+
that
secrete
signals
interacting
with
CD44
cell
surfaces,
potentially
activating
PDE3B
pathway
within
cells
via
integrin
pathway,
leading
The
abnormally
enhanced
signal
between
may
serve
promoting
patients.
Therefore,
could
therapeutic
target
reduce
Non-coding RNA Research,
Год журнала:
2024,
Номер
9(3), С. 667 - 677
Опубликована: Март 14, 2024
Lung
cancer
(LC)
is
considered
to
have
the
highest
mortality
rate
around
world.
Because
there
are
no
early
diagnostic
signs
or
efficient
clinical
alternatives,
distal
metastasis
and
increasing
numbers
of
recurrences
a
challenge
in
management
LC.
Long
non-coding
RNAs
(lncRNAs)
recently
been
recognized
as
critical
regulator
involved
progression
treatment
response
The
Wnt/β-catenin
pathway
has
shown
influence
LC
occurrence
progress.
Therefore,
discovering
connections
between
Wnt
signaling
lncRNAs
may
offer
new
therapeutic
targets
for
improving
management.
In
this
review,
purpose
article
present
possible
approaches
by
reviewing
particular
relationships,
key
processes,
molecules
associated
beginning
development
Nature Communications,
Год журнала:
2024,
Номер
15(1)
Опубликована: Июнь 21, 2024
Chemoresistance
is
a
main
reason
for
treatment
failure
in
patients
with
nasopharyngeal
carcinoma,
but
the
exact
regulatory
mechanism
underlying
chemoresistance
carcinoma
remains
to
be
elucidated.
Here,
we
identify
PJA1
as
key
E3
ubiquitin
ligase
involved
that
highly
expressed
nonresponse
docetaxel-cisplatin-5-fluorouracil
induction
chemotherapy.
We
find
facilitates
docetaxel
resistance
by
inhibiting
GSDME-mediated
pyroptosis
cells.
Mechanistically,
promotes
degradation
of
mitochondrial
protein
PGAM5
increasing
its
K48-linked
ubiquitination
at
K88,
which
further
DRP1
phosphorylation
S637
and
reduced
reactive
oxygen
species
production,
resulting
suppression
antitumour
immune
response.
knockdown
fully
restores
sensitization
effect
knockdown.
Moreover,
pharmacological
targeting
small
molecule
inhibitor
RTA402
enhances
sensitivity
vitro
vivo.
Clinically,
high
expression
indicates
inferior
survival
poor
clinical
efficacy
TPF
IC
patients.
Our
study
emphasizes
essential
role
ligases
regulating
provides
therapeutic
strategies
based
on
ubiquitin-proteasome
system.