Whole-Genome Sequencing of Peribacillus frigoritolerans Strain d21.2 Isolated in the Republic of Dagestan, Russia DOI Creative Commons
Maria N. Romanenko, Anton E. Shikov, Iuliia A. Savina

и другие.

Microorganisms, Год журнала: 2024, Номер 12(12), С. 2410 - 2410

Опубликована: Ноя. 24, 2024

Pesticide-free agriculture is a fundamental pillar of environmentally friendly agriculture. To this end, there an active search for new bacterial strains capable synthesizing secondary metabolites and toxins that protect crops from pathogens pests. In study, we isolated novel strain d21.2 Peribacillus frigoritolerans soil sample collected in the Republic Dagestan, Russia. Leveraging several bioinformatic approaches on Illumina-based whole-genome assembly, revealed harbors certain insecticidal loci (coding putative homologs Bmp Vpa) also contains multiple BGCs (biosynthetic gene clusters), including paeninodin, koranimine, schizokinen, fengycin. total, 21 were predicted as with bactericidal and/or fungicidal effects. Importantly, by applying re-scaffolding pipeline, managed to robustly predict MGEs (mobile genetic elements) associated BGCs, implying high plasticity. addition, d21.2’s genome was free genes encoding enteric toxins, its safety use. A comparison available genomes described here more functionally important than other members species. Therefore, holds potential use due probable manifestation bactericidal, fungicidal, growth-stimulating, useful properties. The assembled NCBI GeneBank under ASM4106054v1.

Язык: Английский

Potential plant benefits of endophytic microorganisms associated with halophyte <i>Glycyrrhiza glabra</i> L DOI Creative Commons
Gulsanam Mardonova, Vyacheslav Shurigin, Farkhod Eshboev

и другие.

AIMS Microbiology, Год журнала: 2024, Номер 10(4), С. 859 - 879

Опубликована: Янв. 1, 2024

<p>In this study, bacteria associated with licorice (<italic>Glycyrrhiza glabra</italic> L.) were characterized through 16S rRNA gene analysis. Profiling of endophytic isolated from <italic>Glycyrrhiza tissues revealed 18 isolates across the following genera: <italic>Enterobacter</italic> (4), <italic>Pantoea</italic> (3), <italic>Bacillus</italic> (2), <italic>Paenibacillus</italic> <italic>Achromobacter</italic> <italic>Pseudomonas</italic> (1), <italic>Escherichia</italic> <italic>Klebsiella</italic> <italic>Citrobacter</italic> and <italic>Kosakonia</italic> (1). Furthermore, beneficial features bacterial for plants determined. The showed capacity to produce siderophores, hydrogen cyanide (HCN), indole-3-acetic acid (IAA), chitinase, protease, glucanase, lipase, other enzymes. Seven antagonistic activity against <italic>F. culmorum</italic>, solani</italic>, <italic>R. solani</italic>. According these results, antimicrobial properties may serve as a source selection microorganisms that have plant fungal pathogens be considered potential candidates control pathogens. selected isolates, <italic>P. polymyxa</italic> GU1, <italic>A. xylosoxidans</italic> GU6, azotoformans</italic> GU7, agglomerans</italic> GU18, increased root shoot growth able colonize root. They can also an active part bioinoculants, improving growth.</p>

Язык: Английский

Процитировано

0

Whole-Genome Sequencing of Peribacillus frigoritolerans Strain d21.2 Isolated in the Republic of Dagestan, Russia DOI Creative Commons
Maria N. Romanenko, Anton E. Shikov, Iuliia A. Savina

и другие.

Microorganisms, Год журнала: 2024, Номер 12(12), С. 2410 - 2410

Опубликована: Ноя. 24, 2024

Pesticide-free agriculture is a fundamental pillar of environmentally friendly agriculture. To this end, there an active search for new bacterial strains capable synthesizing secondary metabolites and toxins that protect crops from pathogens pests. In study, we isolated novel strain d21.2 Peribacillus frigoritolerans soil sample collected in the Republic Dagestan, Russia. Leveraging several bioinformatic approaches on Illumina-based whole-genome assembly, revealed harbors certain insecticidal loci (coding putative homologs Bmp Vpa) also contains multiple BGCs (biosynthetic gene clusters), including paeninodin, koranimine, schizokinen, fengycin. total, 21 were predicted as with bactericidal and/or fungicidal effects. Importantly, by applying re-scaffolding pipeline, managed to robustly predict MGEs (mobile genetic elements) associated BGCs, implying high plasticity. addition, d21.2’s genome was free genes encoding enteric toxins, its safety use. A comparison available genomes described here more functionally important than other members species. Therefore, holds potential use due probable manifestation bactericidal, fungicidal, growth-stimulating, useful properties. The assembled NCBI GeneBank under ASM4106054v1.

Язык: Английский

Процитировано

0