Integrative Organismal Biology,
Год журнала:
2024,
Номер
6(1)
Опубликована: Янв. 1, 2024
As
the
discovery
of
cryptic
species
has
increased
in
frequency,
there
been
an
interest
whether
geometric
morphometric
data
can
detect
fine-scale
patterns
variation
that
be
used
to
morphologically
diagnose
such
species.
We
a
combination
and
ensemble
five
supervised
machine
learning
methods
(MLMs)
investigate
plastron
shape
differentiate
two
putative
turtle
species,
Actinemys
marmorata
pallida.
focus
considerable
research
due
its
biogeographic
distribution
conservation
status.
Despite
this
work,
reliable
morphological
diagnoses
for
are
still
lacking.
validated
our
approach
on
datasets,
one
consisting
eight
disparate
emydid
other
subspecies
Trachemys
(T.
scripta
scripta,
T.
elegans).
The
validation
tests
returned
near-perfect
classification
rates,
demonstrating
is
effective
means
distinguishing
taxonomic
groups
emydids
via
MLMs.
In
contrast,
same
did
not
return
high
rates
set
alternative
phylogeographic
binning
schemes
Actinemys.
All
hypotheses
performed
poorly
relative
datasets
no
single
hypothesis
was
unequivocally
supported
Two
had
performance
marginally
better
than
remaining
hypotheses.
both
cases,
those
favored
two-species
split
between
A.
pallida
specimens,
lending
tentative
support
However,
results
also
underscore
as
whole
lower
levels
plastral
turtles
within
Emydidae,
but
reason
conservatism
unclear.
Scientific Reports,
Год журнала:
2023,
Номер
13(1)
Опубликована: Июнь 14, 2023
Knowledge
of
human
craniofacial
growth
(increase
in
size)
and
development
(change
shape)
is
important
the
clinical
treatment
a
range
conditions
that
affects
it.
This
study
uses
an
extensive
collection
CT
scans
to
investigate
over
first
48
months
life,
detail
how
cranium
changes
form
(size
each
sex
these
are
associated
with
various
soft
tissues
such
as
brain,
eyes
tongue
expansion
nasal
cavity.
achieved
through
multivariate
analyses
cranial
based
on
3D
landmarks
semi-landmarks
by
linear
dimensions,
volumes.
The
results
highlight
accelerations
decelerations
throughout
early
childhood.
They
show
from
0
12
months,
undergoes
greater
than
months.
However,
terms
overall
shape,
there
no
significant
sexual
dimorphism
age
considered
this
study.
In
consequence
single
model
presented
for
future
studies
examine
physio-mechanical
interactions
growth.
Journal of Anatomy,
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 15, 2025
Abstract
Geometric
morphometrics
is
used
in
the
biological
sciences
to
quantify
morphological
traits.
However,
need
for
manual
landmark
placement
hampers
scalability,
which
both
time‐consuming,
labor‐intensive,
and
open
human
error.
The
selected
landmarks
embody
a
specific
hypothesis
regarding
critical
geometry
relevant
question.
Any
adjustment
this
necessitates
acquiring
new
set
of
or
revising
them
significantly,
can
be
impractical
large
datasets.
There
pressing
more
efficient
flexible
methods
that
adapt
different
hypotheses
without
requiring
extensive
effort.
This
study
investigates
precision
accuracy
derived
from
functional
correspondences
obtained
through
map
framework
processing.
We
utilize
deep
network
learn
shape
descriptors,
enable
us
achieve
map‐based
point‐to‐point
between
specimens
our
dataset.
Our
methodology
involves
automating
landmarking
process
by
interrogating
these
maps
identify
corresponding
landmarks,
using
manually
placed
entire
dataset
as
reference.
apply
method
rodent
mandibles
compare
its
performance
MALPACA's,
standard
tool
automatic
placement.
model
demonstrates
speed
improvement
compared
MALPACA
while
maintaining
competitive
level
accuracy.
Although
typically
shows
lowest
RMSE,
models
perform
comparably
well,
particularly
with
smaller
training
datasets,
indicating
strong
generalizability.
Visual
assessments
confirm
automated
placements,
deviations
consistently
falling
within
an
acceptable
range
estimates.
results
underscore
potential
unsupervised
learning
anatomical
placement,
presenting
practical
alternative
traditional
methods.
approach
saves
significant
time
effort
provides
flexibility
about
geometrical
features
re‐acquisition
landmarks.
advancement
significantly
enhance
scalability
applicability
geometric
morphometrics,
making
it
feasible
datasets
diverse
studies.
Diagnostics,
Год журнала:
2025,
Номер
15(3), С. 395 - 395
Опубликована: Фев. 6, 2025
Background:
The
characterization
of
facial
sexual
dimorphic
patterns
in
healthy
populations
serves
as
valuable
normative
data
to
tailor
functionally
effective
surgical
treatments
and
predict
their
aesthetic
outcomes
identify
dysmorphic
traits
related
hormonal
disorders
genetic
syndromes.
Although
the
analysis
differences
juveniles
different
ages
has
already
been
investigated,
few
studies
have
approached
this
topic
with
three-dimensional
(3D)
geometric
morphometric
(GMM)
analysis,
whose
interpretation
may
add
important
clinical
insight
current
understanding.
This
study
aims
investigate
location
extent
variations
through
a
spatially
dense
GMM
analysis.
Methods:
We
investigated
3D
stereophotogrammetric
scans
304
Italians
aged
3
18
years
old
(149
males,
155
females)
categorized
into
four
age
groups:
early
childhood
(3–6
years),
late
(7–12
puberty
(13–15
adolescence
(16–18
years).
Geometric
analyses
shape
(allometry,
general
Procrustes
Principal
Component
Analysis,
distance,
Partial
Least
Square
Regression)
were
conducted
detail
sexually
each
group.
Results:
findings
confirmed
that
males
larger
faces
than
females
same
age,
significant
between
two
sexes
exist
all
groups.
Juveniles
start
express
dimorphism
from
years,
even
though
biological
sex
becomes
predictor
soft
tissue
morphology
7th
year
life,
displaying
more
protrusive
medial
features
showing
outwardly
placed
cheeks
eyes.
Conclusions:
provided
detailed
change
trajectories
along
classes,
can
be
for
several
disciplines
dealing
craniofacial
region.
Our
results
serve
comparative
diagnosis
abnormalities
alterations,
reference
planning
personalized
orthodontic
evaluation,
well
forensic
applications
such
prediction
face
missing
juveniles.
Animals,
Год журнала:
2023,
Номер
13(7), С. 1179 - 1179
Опубликована: Март 28, 2023
Often,
few
landmarks
can
be
reliably
identified
in
analyses
of
form
variation
and
covariation.
Thus,
'semilandmarking'
algorithms
have
increasingly
been
applied
to
surfaces
curves.
However,
the
locations
semilandmarks
depend
on
investigator's
choice
algorithm
their
density.
In
consequence,
extent
that
different
semilandmarking
approaches
densities
result
semilandmarks,
they
expected
yield
results
concerning
patterns
co-variation.
The
such
differences
due
methodology
is,
as
yet,
unclear
often
ignored.
this
study,
performance
three
landmark-driven
is
assessed,
using
two
surface
mesh
datasets
(ape
crania
human
heads)
with
degrees
complexity,
by
comparing
morphometric
analyses.
These
produce
semilandmark
locations,
which,
turn,
lead
statistical
results,
although
non-rigid
are
consistent.
Morphometric
must
interpreted
caution,
recognising
error
inevitable
approximations.
Further
work
needed
investigate
effects
landmark
templates
understand
limitations
advantages
approaches.
Scientific Reports,
Год журнала:
2023,
Номер
13(1)
Опубликована: Март 24, 2023
Our
sense
of
balance
is
among
the
most
central
our
sensory
systems,
particularly
in
evolution
human
positional
behavior.
The
peripheral
vestibular
system
(PVS)
comprises
organs
responsible
for
this
sense;
semicircular
canals
(detecting
angular
acceleration)
and
otolith
(utricle
saccule;
detecting
linear
acceleration,
vibration,
head
tilt).
Reconstructing
lineage,
however,
problematic.
In
contrast
to
considerable
study
canals,
relationships
between
external
bone
internal
membranous
(otolith
system)
remain
largely
unexplored.
This
limits
understanding
functional
morphology.
combines
spherical
harmonic
modeling
landmark-based
shape
analyses
model
configuration
system.
approach
serves
two
aims:
(1)
test
hypothesis
that
bony
form
covaries
with
anatomy;
(2)
create
a
3D
morphometric
visualizing
structure.
Results
demonstrate
significant
associations
tissues
These
data
provide
first
evidence
structure
directly
related
anatomy,
suggesting
basic
biological
relationship.
results
visualize
structural
relationship,
offering
new
avenues
into
biomechanical
assessing
Organismal
morphology
has
been
at
the
core
of
study
biodiversity
for
millennia
before
formalization
concept
evolution.
In
early
to
mid-twentieth
century,
a
strong
theoretical
framework
was
developed
understanding
both
pattern
and
process
morphological
evolution
on
macroevolutionary
scale.
The
past
half
century
transformational
period
evolutionary
morphology,
in
quantification
novel
analytical
tools
estimating
how
why
diversity
changes
through
time,
with
marked
increase
studies
apparent
1990s.
We
are
now
another
inflection
point
evolution,
availability
vast
amounts
high-resolution
data
sampling
extant
extinct
allowing
‘omics’-scale
analysis.
Artificial
intelligence
is
already
increasing
pace
phenomic
collection
even
further.
This
new
reality,
where
ability
obtain
quickly
outpacing
analyse
it
robust,
realistic
models,
brings
set
challenges,
we
here
present
analyses
demonstrating
these
challenges
discussing
solutions.
Fully
transitioning
into
“Omics”
era
will
involve
development
automate
extraction
meaningful,
comparable
morphometric
from
images,
integrate
fossil
large
phylogenetic
trees
downstream
analyses,
generate
robust
models
that
accurately
reflect
complexity
processes
well-suited
high-dimensional
data.
Combined,
advancements
solidify
emerging
field
phenomics
appropriately
center
around
analysis
unambiguously
critical
deep-time
American Journal of Physical Anthropology,
Год журнала:
2024,
Номер
184(3)
Опубликована: Март 16, 2024
Integration
reflects
the
level
of
coordinated
variation
phenotype.
The
integration
postcranial
elements
can
be
studied
from
a
functional
perspective,
especially
with
regards
to
locomotion.
This
study
investigates
link
between
locomotion,
femoral
structural
properties,
and
femur-pelvis
complex
morphology.
Journal of Experimental Zoology Part B Molecular and Developmental Evolution,
Год журнала:
2024,
Номер
342(2), С. 65 - 75
Опубликована: Март 1, 2024
Abstract
The
chin,
a
distinguishing
feature
of
Homo
sapiens
,
has
sparked
ongoing
debates
regarding
its
evolutionary
origins
and
adaptive
significance.
We
contend
that
these
controversies
stem
from
fundamental
disagreement
about
what
constitutes
well‐defined
biological
trait,
problem
received
insufficient
attention
despite
recognized
importance
in
biology.
In
this
paper,
we
leverage
paleoanthropological
research
on
the
human
chin
to
investigate
general
issue
character
or
trait
identification.
First,
examine
four
accounts
existing
literature:
mandibular
differential
growth
byproduct,
bony
prominence,
inverted
T‐relief,
symphyseal
angle.
then
generalize
propose
three‐stage
framework
for
process
identification:
description,
detection,
justification.
use
reinterpret
accounts,
elucidating
key
points
contention
surrounding
as
well
other
morphological
characters.
show
over
carry
broad
important
implications
extend
beyond
are
not
mere
semantic
issues
definition.
Psychiatry Research,
Год журнала:
2024,
Номер
339, С. 116027 - 116027
Опубликована: Июнь 13, 2024
Given
the
shared
ectodermal
origin
and
integrated
development
of
face
brain,
facial
biomarkers
emerge
as
potential
candidates
to
assess
vulnerability
for
disorders
in
which
neurodevelopment
is
compromised,
such
Schizophrenia
(SZ)
bipolar
disorder
(BD).
The
sample
comprised
188
individuals
(67
SZ
patients,
46
BD
patients
75
healthy
controls
(HC)).
Using
a
landmark-based
approach
on
3D
reconstructions,
we
quantified
global
local
shape
differences
between
SZ/BD
HC
using
geometric
morphometrics.
We
assessed
correlations
brain
cortical
measures.
analyses
were
performed
separately
by
sex.
Diagnosis
explained
4.1%
-
5.9%
variance
males
females
with
SZ,
4.5%
BD.
Regarding
shape,
detected
43.2%
significantly
different
distances
47.4%
compared
HC,
whereas
percentages
decreased
35.8%
26.8%,
respectively.
that
area
volume
2.2%
2%
male
sample.
Our
results
support
neurodevelopmental
marker
reveal
sex-specific
pathophysiological
mechanisms
modulating
interplay
face.