Roles of the CCR4‐Not complex in translation and dynamics of co‐translation events
Wiley Interdisciplinary Reviews - RNA,
Год журнала:
2023,
Номер
15(1)
Опубликована: Ноя. 27, 2023
Abstract
The
Ccr4‐Not
complex
is
a
global
regulator
of
mRNA
metabolism
in
eukaryotic
cells
that
most
well‐known
to
repress
gene
expression.
Delivery
the
mRNAs
through
multitude
distinct
mechanisms
accelerates
their
decay,
yet
also
plays
an
important
role
co‐translational
processes,
such
as
association
proteins
and
delivery
translating
organelles.
recent
structure
Not5
interacting
with
translated
ribosome
has
brought
light
embedded
information
within
codon
sequence
can
be
monitored
by
recruitment
elongating
ribosomes.
Thereby,
empowered
regulatory
decisions
determining
fate
being
synthesized
encoding
mRNAs.
This
review
will
focus
on
roles
translation
dynamics
co‐translation
events.
article
categorized
under:
Translation
>
Mechanisms
Regulation
Язык: Английский
Puzzling out nuclear pore complex assembly
FEBS Letters,
Год журнала:
2023,
Номер
597(22), С. 2705 - 2727
Опубликована: Авг. 7, 2023
Nuclear
pore
complexes
(NPCs)
are
sophisticated
multiprotein
assemblies
embedded
within
the
nuclear
envelope
and
controlling
exchanges
of
molecules
between
cytoplasm
nucleus.
In
this
review,
we
summarize
mechanisms
by
which
these
elaborate
built
from
their
subunits,
nucleoporins,
based
on
our
ever-growing
knowledge
NPC
structural
organization
recent
identification
additional
features
process.
We
present
constraints
faced
during
production
gathering
into
oligomeric
complexes,
formation
NPCs
envelopes,
review
cellular
strategies
at
play,
co-translational
assembly
to
enrolment
a
panel
cofactors.
Remarkably,
study
can
inform
perception
biogenesis
in
general
-
vice
versa.
Язык: Английский
Orchestrated centers for the production of proteins or “translation factories”
Wiley Interdisciplinary Reviews - RNA,
Год журнала:
2024,
Номер
15(4)
Опубликована: Июль 1, 2024
The
mechanics
of
how
proteins
are
generated
from
mRNA
is
increasingly
well
understood.
However,
much
less
known
about
protein
production
coordinated
and
orchestrated
within
the
crowded
intracellular
environment,
especially
in
eukaryotic
cells.
Recent
studies
suggest
that
localized
sites
exist
for
specific
proteins.
These
have
been
termed
"translation
factories"
roles
complex
formation,
localization,
inheritance,
translation
regulation
postulated.
In
this
article,
we
review
evidence
supporting
at
these
sites,
details
their
mechanism
likely
functional
significance.
Finally,
consider
key
uncertainties
regarding
elusive
structures
This
article
categorized
under:
Translation
>
Mechanisms
RNA
Export
Localization
Regulation.
Язык: Английский
Hallmarks and evolutionary drivers of cotranslational protein complex assembly
FEBS Journal,
Год журнала:
2023,
Номер
291(16), С. 3557 - 3567
Опубликована: Май 19, 2023
Recent
discoveries
have
highlighted
the
prevalence
of
cotranslational
assembly
in
proteomes,
revealing
a
range
mechanisms
that
enables
protein
complex
subunits
on
ribosome.
Structural
analyses
uncovered
emergent
properties
may
inherently
control
whether
subunit
undergoes
assembly.
However,
evolutionary
paths
yielded
such
complexes
over
an
extended
timescale
remain
largely
unclear.
In
this
review,
we
reflect
historical
experiments
contributed
to
field,
including
breakthroughs
made
possible
proteome-wide
detection
assembly,
and
technical
challenges
yet
be
overcome.
We
introduce
simple
framework
encapsulates
hallmarks
discuss
how
results
from
new
are
shaping
our
view
mechanistic,
structural
factors
driving
phenomenon.
Язык: Английский
Co-translational Assembly Pathways of Nuclear Multiprotein Complexes Involved in the Regulation of Gene Transcription
Journal of Molecular Biology,
Год журнала:
2023,
Номер
436(4), С. 168382 - 168382
Опубликована: Дек. 5, 2023
Most
factors
that
regulate
gene
transcription
in
eukaryotic
cells
are
multimeric,
often
large,
protein
complexes.
The
understanding
of
the
biogenesis
pathways
such
large
and
heterogeneous
assemblies,
as
well
dimerization
partner
choice
among
factors,
is
crucial
to
interpret
control
expression
programs
consequent
cell
fate
decisions.
Co-translational
assembly
(Co-TA)
thought
play
key
roles
complexes
by
directing
complex
formation
during
synthesis.
In
this
review
we
discuss
principles
Co-TA
with
a
special
focus
for
regulatory
We
outline
expected
molecular
advantages
establishing
co-translational
interactions,
pointing
at
available,
or
missing,
evidence
each
them.
hypothesize
different
mechanisms
based
on
explain
allocation
"dilemma"
paralog
proteins
subunits
shared
By
taking
paradigm
employed
three
related
(TFIID,
SAGA
ATAC),
alternative
strategies
nuclear
multiprotein
widespread
–
yet
specific
use
involved
transcription.
Ultimately,
outlined
series
open
questions
which
demand
well-defined
lines
research
investigate
regulation
rely
coordinated
Язык: Английский
Cotranslational molecular condensation of cochaperones and assembly factors facilitates axonemal dynein biogenesis
Proceedings of the National Academy of Sciences,
Год журнала:
2024,
Номер
121(47)
Опубликована: Ноя. 14, 2024
Axonemal
dynein,
the
macromolecular
machine
that
powers
ciliary
motility,
assembles
in
cytosol
with
help
of
dynein
axonemal
assembly
factors
(DNAAFs).
These
DNAAFs
localize
cytosolic
foci
thought
to
form
via
liquid-liquid
phase
separation.
However,
functional
significance
DNAAF
formation
and
how
production
multiple
components
are
so
efficiently
coordinated,
at
such
enormous
scale,
remain
unclear.
Here,
we
unveil
an
hub
enriched
translating
heavy
chains
(HCs)
DNAAFs.
We
show
mRNAs
encoding
interacting
HCs
outer
arms
colocalize
foci,
along
nascent
HCs.
The
these
mRNA
their
colocalization
relies
on
HC
translation.
observe
a
previously
identified
assembly,
containing
Lrrc6
cochaperones
Ruvbl1
Ruvbl2,
colocalizes
is
also
dependent
additionally
required
for
recruitment
into
both
proteins
function
cotranslationally.
propose
anchored
by
stable
interactions
between
HCs,
ribosomes,
mRNAs,
followed
cotranslational
molecular
condensation
factors,
providing
potential
mechanism
coordinates
translation,
folding,
scale.
Язык: Английский