Scientific Reports,
Год журнала:
2024,
Номер
14(1)
Опубликована: Март 24, 2024
Abstract
It
is
metabolic
and
signaling
crosstalk
between
stromal
cells
tumors
in
the
tumor
microenvironment,
which
influences
several
aspects
of
formation
drug
resistance,
including
reprogramming.
Despite
considerable
findings
linking
lncRNAs
HIF-1-related
regulatory
networks
to
cancer
cell,
little
emphasis
has
been
given
role
communication
cancer-associated
fibroblasts
(CAFs)
cells.
Previously,
we
observed
that
NNT-AS1
was
substantially
expressed
CAFs
exosomes,
subsequently
investigated
influence
exosomal
on
glucose
metabolism,
proliferation,
metastasis
pancreatic
ductal
adenocarcinoma
(PDAC)
Transmission
electron
microscopy
used
examine
exosomes
secreted
by
PDAC
patient-derived
CAFs.
qRT-PCR
evaluate
expression
NNT-AS1,
miR-889-3p,
HIF-1.
The
CAFs-derived
cell
progression
metabolism
have
identified.
Dual
luciferase
reporter
assays
examined
binding
After
co-culture
CAFs,
found
they
alter
metastasis.
In
cells,
CAF-derived
lncRNA
acted
as
a
molecular
sponge
for
miR-889-3p.
Furthermore,
HIF-1
could
be
targeted
miR-889-3p
controlled
NNT-AS1.
This
study
explores
mechanism
interaction
glycolytic
remodeling,
through
regulating
miR-889-3p/HIF-1α,
also
helps
discover
new
clinical
treatment
targets
PDAC.
Signal Transduction and Targeted Therapy,
Год журнала:
2022,
Номер
7(1)
Опубликована: Фев. 28, 2022
Metabolic
enzymes
have
an
indispensable
role
in
metabolic
reprogramming,
and
their
aberrant
expression
or
activity
has
been
associated
with
chemosensitivity.
Hence,
targeting
remains
attractive
approach
for
treating
tumors.
However,
the
influence
regulation
of
cysteine
desulfurase
(NFS1),
a
rate-limiting
enzyme
iron-sulfur
(Fe-S)
cluster
biogenesis,
colorectal
cancer
(CRC)
remain
elusive.
Here,
using
vivo
gene-based
clustered
regularly
interspaced
short
palindromic
repeats
(CRISPR)-Cas9
library
screen,
we
revealed
that
loss
NFS1
significantly
enhanced
sensitivity
CRC
cells
to
oxaliplatin.
In
vitro
results
showed
deficiency
synergizing
oxaliplatin
triggered
PANoptosis
(apoptosis,
necroptosis,
pyroptosis,
ferroptosis)
by
increasing
intracellular
levels
reactive
oxygen
species
(ROS).
Furthermore,
oxaliplatin-based
oxidative
stress
phosphorylation
level
serine
residues
NFS1,
which
prevented
S293
phosphorylation-dependent
manner
during
treatment.
addition,
high
transcriptionally
regulated
MYC,
was
found
tumor
tissues
poor
survival
hyposensitivity
chemotherapy
patients
CRC.
Overall,
findings
this
study
provided
insights
into
underlying
mechanisms
identified
inhibition
as
promising
strategy
improving
outcome
platinum-based
treatment
Cancer Communications,
Год журнала:
2022,
Номер
42(2), С. 117 - 140
Опубликована: Янв. 12, 2022
Abstract
With
the
development
of
proteomics
and
epigenetics,
a
large
number
RNA‐binding
proteins
(RBPs)
have
been
discovered
in
recent
years,
interaction
between
long
non‐coding
RNAs
(lncRNAs)
RBPs
has
also
received
increasing
attention.
It
is
extremely
important
to
conduct
in‐depth
research
on
lncRNA‐RBP
network,
especially
context
its
role
occurrence
cancer.
Increasing
evidence
demonstrated
that
interactions
play
vital
cancer
progression;
therefore,
targeting
these
could
provide
new
insights
for
drug
discovery.
In
this
review,
we
discussed
how
lncRNAs
can
interact
with
regulate
their
localization,
modification,
stability,
activity
effects
transport,
transcription,
localization
lncRNAs.
Moreover,
explored
regulation
influence
lncRNAs,
RBPs,
downstream
pathways
are
related
development,
such
as
N6‐methyladenosine
(m6A)
modification
addition,
network
regulates
cell
phenotypes,
proliferation,
apoptosis,
metastasis,
resistance,
immunity,
tumor
environment,
metabolism.
Furthermore,
summarized
therapeutic
strategies
target
network.
Although
treatments
still
experimental
stage
various
theories
processes
being
studied,
believe
may
ideas
treatment.
Cancer Communications,
Год журнала:
2022,
Номер
42(3), С. 223 - 244
Опубликована: Фев. 18, 2022
Cancer
cells
selectively
promote
the
translation
of
oncogenic
transcripts
to
stimulate
cancer
progression.
Although
growing
evidence
has
revealed
that
tRNA
modifications
and
related
genes
participate
in
this
process,
their
roles
head
neck
squamous
cell
carcinoma
(HNSCC)
remain
largely
uncharacterized.
Here,
we
sought
investigate
function
mechanisms
transfer
RNA
(tRNA)
N7-methylguanosine
(m7
G)
modification
regulating
occurrence
development
HNSCC.Cell
lost-of-function
gain-of-function
assays,
xenograft
models,
conditional
knockout
knockin
mouse
models
were
used
study
physiological
functions
m7
G
HNSCC
tumorigenesis.
expression
profiling,
mRNA
profiling
rescue
assays
performed
uncover
underlying
molecular
mechanisms.
Single-cell
sequencing
(scRNA-seq)
was
conducted
explore
tumor
microenvironment
changes.The
methyltransferase
complex
components
Methyltransferase-like
1
(METTL1)/WD
repeat
domain
4
(WDR4)
upregulated
associated
with
a
poor
prognosis.
Functionally,
METTL1/WDR4
promoted
progression
metastasis
cell-based
transgenic
models.
Mechanistically,
ablation
METTL1
reduced
levels
16
tRNAs,
inhibiting
subset
transcripts,
including
phosphatidylinositol-3-kinase/protein
kinase
B/mammalian
target
rapamycin
(PI3K/AKT/mTOR)
signaling
pathway.
In
addition,
chemical
modulators
PI3K/Akt/mTOR
pathway
reversed
effects
Mettl1
HNSCC.
Furthermore,
scRNA-seq
results
altered
immune
landscape
cell-cell
interaction
between
stromal
compartment.The
found
malignancy
through
global
translation,
PI3K/AKT/mTOR
pathway,
alter
landscape.
could
be
promising
treatment
for
patients.
Drug
resistance
in
cancer
cells
significantly
diminishes
treatment
efficacy,
leading
to
recurrence
and
metastasis.
A
critical
factor
contributing
this
is
the
epigenetic
alteration
of
gene
expression
via
RNA
modifications,
such
as
N6-methyladenosine
(m6A),
N1-methyladenosine
(m1A),
5-methylcytosine
(m5C),
7-methylguanosine
(m7G),
pseudouridine
(Ψ),
adenosine-to-inosine
(A-to-I)
editing.
These
modifications
are
pivotal
regulating
splicing,
translation,
transport,
degradation,
stability.
Governed
by
"writers,"
"readers,"
"erasers,"
impact
numerous
biological
processes
progression,
including
cell
proliferation,
stemness,
autophagy,
invasion,
apoptosis.
Aberrant
can
lead
drug
adverse
outcomes
various
cancers.
Thus,
targeting
modification
regulators
offers
a
promising
strategy
for
overcoming
enhancing
efficacy.
This
review
consolidates
recent
research
on
role
prevalent
resistance,
with
focus
m6A,
m1A,
m5C,
m7G,
Ψ,
A-to-I
Additionally,
it
examines
regulatory
mechanisms
linked
underscores
existing
limitations
field.
Cellular & Molecular Biology Letters,
Год журнала:
2024,
Номер
29(1)
Опубликована: Янв. 3, 2024
Abstract
Signal
transducer
and
activator
of
transcription
3
(STAT3),
as
a
key
node
in
numerous
carcinogenic
signaling
pathways,
is
activated
various
tumor
tissues
plays
important
roles
formation,
metastasis,
drug
resistance.
STAT3
considered
potential
subtarget
for
therapy.
Noncoding
RNA
(ncRNA)
special
type
transcript.
Transforming
from
“junk”
transcripts
into
molecules
involved
cell
apoptosis,
growth,
functional
regulation,
ncRNA
has
been
proven
to
be
closely
related
epithelial–mesenchymal
transition
resistance
processes
cells
over
the
past
few
decades.
Research
on
relationship
between
factor
ncRNAs
attracted
increased
attention.
To
date,
existing
reviews
have
mainly
focused
regulation
by
STAT3;
there
no
review
ncRNAs.
However,
understanding
its
mechanism
comprehensively
understand
mutual
regulatory
Therefore,
this
review,
we
summarize
long
noncoding
RNA,
microRNA,
circular
possible
mechanisms.
In
addition,
provide
an
update
research
progress
This
will
new
perspective
ncRNAs,
well
targeting
or
treat
diseases
such
tumors.
Cells,
Год журнала:
2021,
Номер
10(9), С. 2340 - 2340
Опубликована: Сен. 7, 2021
Hypoxia
and
inflammation
are
frequently
co-incidental
features
of
the
tissue
microenvironment
in
a
wide
range
inflammatory
diseases.
While
impact
hypoxia
on
pathways
immune
cells
has
been
well
characterized,
less
is
known
about
how
stimuli
such
as
cytokines
upon
canonical
hypoxia-inducible
factor
(HIF)
pathway,
master
regulator
cellular
response
to
hypoxia.
In
this
review,
we
discuss
what
two
major
pro-inflammatory
cytokines,
tumor
necrosis
factor-α
(TNF-α)
interleukin-1β
(IL-1β),
regulation
HIF-dependent
signaling
at
sites
inflammation.
We
report
extensive
evidence
for
these
directly
impacting
HIF
through
transcriptional
post-translational
levels.
conclude
that
multi-level
crosstalk
between
hypoxic
plays
an
important
role
shaping
nature
degree
occurring
sites.
Frontiers in Genetics,
Год журнала:
2022,
Номер
13
Опубликована: Июль 22, 2022
Background:
Cuproptosis
is
a
new
type
of
cell
death
that
induces
protein
toxic
stress
and
eventually
leads
to
death.
Hence,
regulating
cuproptosis
in
tumor
cells
therapeutic
approach.
However,
studies
on
cuproptosis-related
long
noncoding
RNA
(lncRNA)
head
neck
squamous
carcinoma
(HNSC)
have
not
been
found.
This
study
aimed
explore
the
lncRNAs
prognostic
marker
their
relationship
immune
microenvironment
HNSC
by
using
bioinformatics
methods.
Methods:
sequencing,
genomic
mutations,
clinical
data
TCGA_HNSC
were
downloaded
from
The
Cancer
Genome
Atlas.
patients
randomly
assigned
either
training
group
or
validation
cohort.
least
absolute
shrinkage
selection
operator
Cox
regression
multivariate
models
used
determine
model
cohort,
its
independent
effect
was
further
confirmed
entire
cohorts.
Results:
Based
previous
literature,
we
collected
19
genes
associated
with
cuproptosis.
Afterward,
783
obtained
through
coexpression.
revealed
constructed
eight
(AL132800.1,
AC090587.1,
AC079160.1,
AC011462.4,
AL157888.1,
GRHL3-AS1,
SNHG16,
AC021148.2).
Patients
divided
into
high-
low-risk
groups
based
median
risk
score.
Kaplan-Meier
survival
curve
overall
between
statistically
significant.
receiver
operating
characteristic
principal
component
analysis
demonstrated
accurate
ability
model.
Univariate
showed
score
an
factor.
In
addition,
establish
nomogram
predictive
power
markers.
mutation
burden
significant
differences
groups.
high-risk
responded
better
immunotherapy
than
those
group.
We
also
found
scores
significantly
drug
sensitivity
HNSC.
Conclusion:
summary,
our
identified
cuprotosis-related
signature
as
predictor,
which
may
be
promising
biomarkers
for
predicting
benefit
well
sensitivity.
Frontiers in Cell and Developmental Biology,
Год журнала:
2021,
Номер
9
Опубликована: Дек. 24, 2021
Epigenetic
modifications
and
metabolism
are
two
fundamental
biological
processes.
During
tumorigenesis
cancer
development
both
epigenetic
metabolic
alterations
occur
often
intertwined
together.
contribute
to
reprogramming
by
modifying
the
transcriptional
regulation
of
enzymes,
which
is
crucial
for
glucose
metabolism,
lipid
amino
acid
metabolism.
Metabolites
provide
substrates
modifications,
including
histone
modification
(methylation,
acetylation,
phosphorylation),
DNA
RNA
methylation
non-coding
RNAs.
Simultaneously,
some
metabolites
can
also
serve
as
nonhistone
post-translational
that
have
an
impact
on
tumors.
And
enzymes
regulate
independent
their
metabolites.
In
addition,
produced
gut
microbiota
influence
host
Understanding
crosstalk
among
gene
expression
in
may
help
researchers
explore
mechanisms
carcinogenesis
progression
metastasis,
thereby
strategies
prevention
therapy
cancer.
this
review,
we
summarize
progress
understanding
interactions
between
epigenetics.