bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2021,
Номер
unknown
Опубликована: Окт. 3, 2021
ABSTRACT
Divergence
along
the
benthic-pelagic
axis
is
one
of
most
widespread
and
repeated
patterns
morphological
variation
in
fishes,
producing
body
shape
diversity
associated
with
ecology
swimming
mechanics.
This
ecological
shift
also
first
stage
explosive
adaptive
radiation
cichlid
fishes
East
African
Rift
Lakes.
We
use
two
hybrid
crosses
cichlids
(
Metriaclima
sp.
x
Aulonocara
Labidochromis
Labeotropheus
sp.,
>975
animals
total)
ecomorphological
to
determine
genetic
basis
diversification.
Using
a
series
both
linear
geometric
measurements,
we
identify
55
quantitative
trait
loci
(QTL)
that
underlie
various
aspects
divergence.
These
QTL
are
spread
throughout
genome,
each
explain
3.0-7.2%
phenotypic
variation,
largely
modular.
Further,
distinct
between
these
Lake
Malawi
compared
previously
identified
for
such
as
sticklebacks.
find
controlled
by
many
genes
small
effects.
In
all,
convergent
benthic
pelagic
phenotypes
commonly
observed
across
fish
clades
likely
due
molecular
mechanisms.
Molecular Ecology,
Год журнала:
2023,
Номер
32(14), С. 3975 - 3988
Опубликована: Май 10, 2023
Abstract
Divergence
in
body
shape
is
one
of
the
most
widespread
and
repeated
patterns
morphological
variation
fishes
associated
with
habitat
specification
swimming
mechanics.
Such
ecological
diversification
first
stage
explosive
adaptive
radiation
cichlid
East
African
Rift
Lakes.
We
use
two
hybrid
crosses
cichlids
(
Metriaclima
sp
.
×
Aulonocara
sp.
Labidochromis
Labeotropheus
sp.,
>975
animals
total)
to
determine
genetic
basis
that
similar
benthic‐pelagic
divergence
across
fishes.
Using
a
series
both
linear
geometric
measurements,
we
identified
34
quantitative
trait
loci
(QTL)
underlie
various
aspects
variation.
These
QTL
are
spread
throughout
genome,
each
explaining
3.2–8.6%
phenotypic
variation,
largely
modular.
Further,
distinct
between
these
Lake
Malawi
compared
previously
for
such
as
sticklebacks.
find
controlled
by
many
genes
small
effect.
In
all,
convergent
phenotypes
commonly
observed
fish
clades
likely
due
molecular
mechanisms.
Ecology and Evolution,
Год журнала:
2021,
Номер
11(12), С. 7315 - 7334
Опубликована: Май 2, 2021
Conceptual
models
of
adaptive
divergence
and
ecological
speciation
in
sympatry
predict
differential
resource
use,
phenotype-environment
correlations,
reduced
gene
flow
among
diverging
phenotypes.
While
these
predictions
have
been
assessed
past
studies,
connections
them
rarely
collectively.
We
examined
relationships
phenotypic,
ecological,
genetic
variation
Arctic
charr
(Salvelinus
alpinus)
from
six
Icelandic
localities
that
undergone
varying
degrees
into
sympatric
benthic
pelagic
morphs.
characterized
morphological
with
geometric
morphometrics,
tested
for
use
between
morphs
using
stable
isotopes,
inferred
the
amount
single
nucleotide
polymorphisms.
Analysis
isotopic
signatures
indicated
showed
similar
difference
across
populations,
likely
arising
common
utilization
niche
space
within
each
population.
Carbon
signature
was
also
a
significant
predictor
individual
body
shape
size,
suggesting
is
associated
phenotypic
variation.
The
estimated
percentage
hybrids
varied
populations
(from
0%
to
15.6%)
but
majority
fish
had
genotypes
(ancestry
coefficients)
characteristic
pure
Despite
evidence
morphs,
we
did
not
detect
expected
negative
relationship
flow.
Three
lakes
pattern,
fourth
no
detectable
hybridization
relatively
low
differences
them.
This
coupled
finding
differentiation
effects
on
suggests
reproductive
isolation
maintains
when
are
low.
Our
ability
assess
phenotype,
ecology,
genetics
deepens
our
understanding
processes
underlying
sympatry.
Aquatic Conservation Marine and Freshwater Ecosystems,
Год журнала:
2024,
Номер
34(2)
Опубликована: Фев. 1, 2024
Abstract
Patterns
in
phenotypic
and
genotypic
diversity
within
many
species
are
becoming
increasingly
apparent,
although
there
remain
for
which
such
patterns
have
yet
to
be
described
adequately.
Fishes
from
recently
glaciated
ecosystems
likely
particularly
rich
intraspecific
diversity,
current
conservation
management
strategies
are,
parts
of
the
world,
Europe,
conventionally
overwhelmingly
focused
on
species,
regardless
competing
concepts,
appropriate
policies
managing
at
a
sub‐specific
level
still
developed.
Occasional
attempts
protect
certain
vulnerable
ecotypes
proposed
alternative
units
(e.g.
‘Pragmatic
Species’
or
‘Evolutionarily
Significant
Units’)
reinforce
conventional
primacy
contemporary
expressed
variation.
Intraspecific
ultimately
result
complex
processes
divergence;
approaches
that
focus
products
evolution
largely
ignore
generate
maintain
those
patterns.
Policies
acknowledge
continuation
evolution,
derivation
novel
over
often
very
short
time
spans
role
environment
initiating
perpetuating
these
poorly
integrated
into
strategy.
To
address
possible
deficits,
where
is
not
addressed
practice,
we
believe
it
important
first
characterize
hidden
genetic
may
intimate
eco‐evolutionary
processes,
initially
among
high
status.
A
second
step
should
use
an
approach
illuminates
ultimate
mechanisms
bring
about
also
concedes
central
affords
adequate
protection
drive
as
United
Nations
Convention
Biological
Diversity
(CBD)
Ecosystems
approach.
Ecology and Evolution,
Год журнала:
2024,
Номер
14(5)
Опубликована: Май 1, 2024
Understanding
the
adaptability
of
small
populations
in
face
environmental
change
is
a
central
problem
evolutionary
biology.
Solving
this
challenging
because
neutral
processes
that
operate
on
historical
and
contemporary
timescales
can
override
effects
selection
populations.
We
assessed
isolation
by
colonization
(IBC),
dispersal
limitation
(IBDL)
as
reflected
pattern
distance
(IBD),
adaptation
(IBA)
roles
genetic
drift
gene
flow
patterns
differentiation
among
19
cave-dwelling
Icelandic
Arctic
charr
(
Ecology and Evolution,
Год журнала:
2022,
Номер
12(10)
Опубликована: Окт. 1, 2022
Maternal
effects
have
the
potential
to
alter
early
developmental
processes
of
offspring
and
contribute
adaptive
diversification.
Egg
size
is
a
major
contributor
phenotype,
which
can
influence
trajectories
resource
use.
However,
what
extent
intraspecific
variation
in
egg
facilitates
evolution
polymorphism
poorly
understood.
We
studied
multiple
morphs
Icelandic
Arctic
charr,
ranging
from
an
anadromous
morph-with
phenotype
similar
proposed
ancestral
phenotype-to
sympatric
that
vary
their
degree
phenotypic
divergence
morph.
characterized
tested
whether
influenced
at
life
stages
(i.e.,
timing
of-
at-
hatching
first
feeding
[FF]).
predicted
would
differ
among
be
less
variable
as
diverge
away
phenotype.
also
correlate
with
timing.
found
had
different
size,
timing,
FF.
increased
proximity
decreased,
larger
eggs
generally
giving
rise
offspring,
especially
FF,
but
no
effect
on
rate.
The
interaction
between
environment
may
profound
impact
fitness,
where
resulting
differences
life-history
traits
act
initiate
and/or
maintain
Communications Biology,
Год журнала:
2023,
Номер
6(1)
Опубликована: Авг. 31, 2023
Adaptive
evolution
may
be
influenced
by
canalization,
the
buffering
of
developmental
processes
from
environmental
and
genetic
perturbations,
but
how
this
occurs
is
poorly
understood.
Here,
we
explore
gene
expression
variability
evolves
in
diverging
hybridizing
populations,
focusing
on
Arctic
charr
(Salvelinus
alpinus)
Thingvallavatn,
a
classic
case
divergence
between
feeding
habitats.
We
report
distinct
profiles
variance
for
both
coding
RNAs
microRNAs
offspring
two
contrasting
morphs
(benthic/limnetic)
their
hybrids
reared
common
conditions
sampled
at
key
points
cranial
development.
Gene
substantially
affected
maternal
effects,
many
genes
show
biased
toward
limnetic
morph.
This
suggests
that
as
inferred
variance,
can
rapidly
diverge
sympatry
through
multiple
pathways,
which
are
associated
with
dominance
patterns
possibly
biasing
evolutionary
trajectories
mitigating
effects
hybridization
adaptive
evolution.
Proceedings of the Royal Society B Biological Sciences,
Год журнала:
2023,
Номер
290(2013)
Опубликована: Дек. 13, 2023
Animal
personality
has
been
shown
to
be
influenced
by
both
genetic
and
environmental
factors
shaped
natural
selection.
Currently,
little
is
known
about
mechanisms
influencing
the
development
of
traits.
This
study
examines
extent
which
genetically
and/or
environmentally
responsive
(plastic).
We
also
investigated
role
evolutionary
history,
assessing
whether
traits
could
canalized
along
a
ecological
divergence
gradient.
tested
plastic
potential
boldness
in
juveniles
five
Icelandic
Arctic
charr
morphs
(Salvelinus
alpinus),
including
two
pairs
sympatric
morphs,
displaying
various
degrees
from
ancestral
anadromous
charr,
split
between
treatments
mimicking
benthic
versus
pelagic
feeding
modalities.
show
that
differences
mean
are
mostly
affected
genetics.
While
treatment
led
bolder
individuals
overall,
effect
was
rather
weak,
suggesting
lies
under
strong
influence
with
reduced
potential.
Finally,
we
found
hints
canalization
through
variance
plasticity,
higher
consistency
within
morphs.
These
findings
provide
new
insights
on
how
behavioural
may
impact
adaptive
diversification.
Molecular Ecology,
Год журнала:
2022,
Номер
31(18), С. 4688 - 4706
Опубликована: Июль 21, 2022
Abstract
Sympatric
adaptive
phenotypic
divergence
should
be
underlain
by
genomic
differentiation
between
subpopulations.
When
drives
similar
patterns
of
and
ecological
variation
within
species
we
expect
evolution
to
draw
on
common
allelic
variation.
We
investigated
histories
signatures
benthic
pelagic
morphs
Icelandic
Arctic
charr.
Divergence
for
each
four
populations
were
reconstructed
using
coalescent
modelling
14,187
single
nucleotide
polymorphisms.
with
continuous
gene
flow
was
supported
in
two
while
allopatric
secondary
contact
one
population;
could
not
differentiate
demographic
models
the
fourth
population.
detected
parallel
along
benthic‐pelagic
evolutionary
trajectories
among
populations.
Patterns
characterized
outlier
loci
many
narrow
peaks
throughout
genome,
which
may
reflect
eroding
effects
nearby
neutral
loci.
then
used
genome‐wide
association
analyses
relate
both
(body
shape
size)
(carbon
nitrogen
stable
isotopes)
differentiation.
Many
associated
three
highly
divergent
populations,
suggesting
a
basis
divergence.
little
evidence
as
most
regions
shared
Our
results
show
that
can
have
varied
consequences
relatively
recent
origins,
histories,