Editorial: Five grand challenges in toxicology DOI Creative Commons
Bengt Fadeel,

Jan Alexander,

Sara C. Antunes

и другие.

Frontiers in Toxicology, Год журнала: 2025, Номер 6

Опубликована: Янв. 21, 2025

IntroductionThe well-known dictum "the dose makes the poison" is familiar to every student of toxicology, though it important add that there no risk adverse effects without exposure. This essential point sometimes overlooked when new and emerging risks such as engineered nanomaterials are being discussed (1). The question a poisonous substance or toxicant relates toxicology scientific discipline – science poisons, has evolved into "science safety"? (2). Furthermore, we ready shed predominantly observational past usher in predictive toxicological future? Fifteen years ago, Thomas Hartung lamented studies search for rare events using imperfect models usually addressing one at time (3). He then listed strategic developments required implement regulatory including need standardization validation approaches, well systematic integration these approaches testing strategies is, what should serve benchmark given conventional processes often rely on animal tests may lack adequate themselves (4). Notwithstanding, evident from discussions both basic an applied science. objectives thus two-fold: uncover mechanisms substances biological systems while also leveraging this knowledge protect human health environment. To facilitate translation practice, flow information be bidirectional. Indeed, promote field, dialogue between researchers regulators identify kind needed.Grand challengesThe authors editorial editors different sections Frontiers Toxicology, journal was launched 5 ago (in 2019). Toxicology multidisciplinary committed presenting latest research substances, particles, mixtures living organisms ecosystems, molecular population effects. received its first impact factor 2024. However, believe true lies providing forum exchange community. Here, address five grand challenges, with aim stimulating further discussion.Challenge 1: investigation towards mechanistic toxicologyToxicology viewed descriptive tasked cataloguing drug candidates. devoted understanding toxicity covers spectrum chemicals, which turn unearth fundamental mechanisms. Thus, not afterthought. For instance, have delivered critical insights biology improved role gut microbiome xenobiotic metabolism (5), receptors environmental sensors aryl hydrocarbon receptor (AhR) disease (6). so-called investigative (or mechanistic) gaining momentum pharmaceutical sciences (7). Some "game-changing" technologies according recent survey conducted among medium-sized large companies, organ-on-a-chip microphysiological systems, genomic profiling, high-content imaging-based assays perception other use stem cells had barely changed compared previous It emphasized, however, ultimate goal investigations differs public disciplines. In case, minimize so balance beneficial favor (which implies some degree considered acceptable), whereas second obvious society does tolerate any toxicity. challenge occupational medicine highest level exposure effect elicited. Nevertheless, lessons can learned sciences. Computational leveraged discovery (8), physics-driven (quantum mechanics) data-driven (artificial intelligence) based been footing too (9).Challenge 2: problem multiscale comparisonsBiological pathways defined series interactions molecules lead certain product change cell (though noted extracellular pathways). Pathway "thinking", i.e., view best understood terms their disruption molecular) pathways, come fore contemporary explicit development outcome (discussed below). suggested perspective tenet recontextualized disrupts pathway" order better guide understand results (10). design experiments allow opposed reductionist gene protein making sure model relevant our humans. addition, simultaneous several chemicals common, currently clear if overall affected situation (for remains whether mixture individual components present concentration below no-effect-level induce toxic result "dose addition" wherein each component acts same target). Considerable advances made respect living, breathing lung mimic (11). Using bio-inspired device, demonstrated cyclic mechanical strain accentuated inflammatory responses silica nanoparticles. promising adenocarcinoma line, NCl-H441, used impersonate real epithelial cells. (see below) instead lines could potentially bridge gap vitro situation. Moreover, amenable high-throughput screening (11), additional cost complexity hamper use.This brings us major challenges testing, namely, how divide vivo say models; instead, they outcomes humans after all, main goal). impacts play out across multiple spatial temporal scales, yet tend test static replicate organism. (12). integrate approach occur levels organization input toxicokinetic toxicodynamic modeling happens introduced body.The devil details. culture techniques adopted variety purposes, reduction replacement experiments. animal-derived products meaning methods completely animal-free. fetal bovine serum (FBS), supplement medium, only gives rise welfare concerns, but raises questions related batch-to-batch variation ill-defined nature FBS, mention species differences call relevance obtained standard medium. push fully humanized protocols chemically media (13).Challenge 3: computation beware drowning sea dataThe term "omics" genomics, transcriptomics, proteomics, metabolomics, epigenomics coupled investigate underlying action toxicants. Sydney Brenner famously complained become, his words, "low input, high throughput, output science", omics-based equated hypothesis-free research, misguided suggestion lists genes proteins metabolites light methodologies above merely tools, albeit very sophisticated ones, computational deconvolution needed make sense data. Hence, will necessarily reveal (novel) mechanism anchored firm question. On hand, yield global perturbations triggered by overcome tendencies toxicology. note portfolio omics rapidly expanding, single-cell transcriptomics proteomics greatly increased granularity introduction spatially resolved heralds era analysis expression tissue (14). torrential increase amount data generated requires (15), breed toxicologists versed methods.Predictive viewed, fundamentally, prediction activity chemical structure; known structure-activity relationship (16). end, useful, good quality, usable (meaning investigators must able access data). refer complex (living) observations simple ones (17). ensure outcomes, (toxicants) quantitatively qualitatively. If met, significantly overhaul assessment advent artificial intelligence (AI) expanded toolbox toxicologists. machine learning perhaps support decision (18). Machine computers ability learn explicitly programmed. "learning" anthropomorphic; AI algorithms enable pattern recognition (human) assessors. Understanding reliability AI-based tools indeed, challenge. paves way deterministic probabilistic Probabilistic Bayesian (named English statistician Bayes whose posthumous paper "An Essay Towards Solving Problem Doctrine Chances" forms basis now called Bayes' theorem) incorporating uncertainties variability provide estimates range likelihood hazard (19).Challenge 4: regulation methodologiesHistorically, mainly data, observed considerable attempts transit (animal) mechanism-based, human-relevant US Environmental Protection Agency (EPA) initiated ToxCast, "toxicity forecaster", program develop aid prioritization (20). cultures useful tool. organism, multicellular organotypic developed (21). biology, especially induced pluripotent (iPSC) technology, provided significant boost. Developmental neurotoxicology battery primary NAMs pilot assessing endpoints setting. Making predictions regarding non-trivial. (AOPs) conceptual framework knowledge, molecular-level system (22). Toxicogenomics enrich AOPs (23). important, distinguish response adaptive distinction two (24).Overall, reliable needed, (NAMs) mind. addressed, Partnership Assessment Risks Chemicals (PARC), multinational project aligned European Union's Strategy Sustainability Green Deal (www.eu-parc.eu). Similarly, NIH Common Fund's Complement Animal Research Experimentation (Complement-ARIE) aimed speeding up development, standardization, validation, (www.commonfund.nih.gov). technology methodology animals. newly methods; implementation (25). acceptance key, agencies needed. Ultimately, practices depend demonstrating merits, perspectives assessors assess associated (26).The complicated factors, systematically studies, strongly affect final effect. pre-existing diseases cause susceptibility chemicals. Co- cumulative exposures considered, sex life stage (age) exposed (27). minority groups display unpredictable sex-divergent immune were disclosed study individuals undergoing gender affirming hormone treatment (28). Traditional default uncertainty factors inter-individual inter-species differences, promise all populations (29).Ecological stepwise evaluation parameters stages sensitive assays. identification biomarkers capable reporting issues before manifest level, allowing makers act measures safeguard ecosystems. context, concerted efforts gaps current mammalian-centric assay landscape ecologically (30). Human assessments performed isolation, key therefore integrated aspects consolidated "one health" paradigm emphasized safe-and-sustainable-by-design (SSbD) circular economy vision guides innovation process creating materials more sustainable safer environment (31).Challenge 5: education fostering future toxicologistsParacelsus, Father physicians recognize chemistry medicine, believed those who practiced art knew it: patients your textbook". sought cannot achieved solely through scholastic disputations, embarked extensive travels around Europe spending year physician university professor Basel where he gave lectures own observations, ancient tracts written centuries ago. episode reminds thrives illustrates observation (data collection) enables prevailing dogma. practice thinking instilled, foremost, students future. equally convey young scientists interested full-fledged uniquely interdisciplinary nature. integrates wide fields, chemistry, pharmacology, epidemiology, statistics, mathematics, computer science, on. Due interdisciplinarity, taught various departments, broad versatile education. ample synthesis reflection. relies advanced instruments, appreciation analytical (including mass spectrometry), statistics (i.e., big analysis, cohort studies) next generation tackle many exemplified here. Closing remarksMinority Report (2002) fiction movie Tom Cruise portrays chief officer "precrime" unit stops crimes take place. clairvoyants foresee prevent impending disaster. Instead, refers methods) complementary classical toxicology; shift away "one-substance-at-a-time" holistic addresses real-life throughout lifespan (aka exposome) (32). "exposome" regarded experts nebulous concept. exposome epidemiological studies. stronger focus totality galvanize exposure-effect relationships level.Another branch involves xenobiotics ecosystems biota (the plant life) contain. Predictive early warning problems. conjunction rising contaminant climate anticipate difficult resolve require time-consuming costly restoration (33).Thus, overarching themes during 15 transformation (empirical) would account (34). integral prudent consider look (35).In article, presented attempt frame hope brief overview stimulate discussion. provides worldwide community (Figure 1). article (editorial) published focused (1), most cited date innovative detection micro- nanoplastics (36), topic great concern. third articles meet requirements (25) reproductive PFAS (per- polyfluorinated alkyl "forever chemicals") (37), respectively. close 700 board members than 50 countries, located Europe, North America, Asia-Pacific (APAC). welcome regions. Together, advance field bridging discoveries practical applications health.

Язык: Английский

Tracking complex mixtures of chemicals in our changing environment DOI
Beate I. Escher, Heather M. Stapleton, Emma Schymanski

и другие.

Science, Год журнала: 2020, Номер 367(6476), С. 388 - 392

Опубликована: Янв. 24, 2020

Chemicals have improved our quality of life, but the resulting environmental pollution has potential to cause detrimental effects on humans and environment. People biota are chronically exposed thousands chemicals from various sources through multiple pathways. Environmental chemists toxicologists moved beyond detecting quantifying single characterizing complex mixtures in indoor outdoor environments biological matrices. We highlight analytical bioanalytical approaches isolating, characterizing, tracking groups concern Techniques that combine chemical analysis bioassays facilitate identification pose a combined risk.

Язык: Английский

Процитировано

580

Assessing the Ecological Risks of Per‐ and Polyfluoroalkyl Substances: Current State‐of‐the Science and a Proposed Path Forward DOI Creative Commons
Gerald T. Ankley,

P.M. Cureton,

Robert A. Hoke

и другие.

Environmental Toxicology and Chemistry, Год журнала: 2020, Номер 40(3), С. 564 - 605

Опубликована: Сен. 17, 2020

Per- and poly-fluoroalkyl substances (PFAS) encompass a large, heterogenous group of chemicals potential concern to human health the environment. Based on information for few relatively well-understood PFAS such as perfluorooctane sulfonate perfluorooctanoate, there is ample basis suspect that at least subset can be considered persistent, bioaccumulative, and/or toxic. However, data suitable determining risks in either prospective or retrospective assessments are lacking majority PFAS. In August 2019, Society Environmental Toxicology Chemistry sponsored workshop focused state-of-the-science supporting risk assessment The present review summarizes discussions concerning ecotoxicology ecological First, we summarize currently available relevant problem formulation/prioritization, exposure, hazard/effects context regulatory activities from around world. We then describe critical gaps uncertainties relative propose approaches address these needs. Recommendations include development more comprehensive monitoring programs support exposure assessment, an emphasis research formulation predictive models bioaccumulation, silico, vitro, vivo methods efficiently assess biological effects potentially sensitive species/endpoints. Addressing needs associated with assessing will require cross-disciplinary employ both conventional new integrated, resource-effective manner. Environ Toxicol Chem 2021;40:564-605. © 2020 Authors. published by Wiley Periodicals LLC behalf SETAC. This article has been contributed US Government employees their work public domain USA.

Язык: Английский

Процитировано

276

The ECOTOXicology Knowledgebase: A Curated Database of Ecologically Relevant Toxicity Tests to Support Environmental Research and Risk Assessment DOI
Jennifer H. Olker,

Colleen M. Elonen,

Anne Pilli

и другие.

Environmental Toxicology and Chemistry, Год журнала: 2022, Номер 41(6), С. 1520 - 1539

Опубликована: Март 9, 2022

The need for assembled existing and new toxicity data has accelerated as the amount of chemicals introduced into commerce continues to grow regulatory mandates require safety assessments a greater number chemicals. To address this evolving need, ECOTOXicology Knowledgebase (ECOTOX) was developed starting in 1980s is currently world's largest compilation curated ecotoxicity data, providing support chemical ecological research through systematic transparent literature review procedures. recently released version ECOTOX (Ver 5, www.epa.gov/ecotox) provides single-chemical over 12,000 species with one million test results from 50,000 references. Presented an overview ECOTOX, detailing curation processes within context current practices discussing how recent updates improve accessibility reusability assessment, management, environmental Relevant acceptable are identified studies scientific literature, pertinent methodological details extracted following well-established controlled vocabularies newly added quarterly public website. Release Ver included entirely redesigned user interface enhanced queries retrieval options, visualizations aid exploration, customizable outputs export use external applications, interoperability databases tools. This reliable source evolve accessible state-of-the-art increased other relevant resources. Environ Toxicol Chem 2022;41:1520-1539. © 2022 SETAC. article been contributed by US Government employees their work domain USA.

Язык: Английский

Процитировано

173

(Eco)toxicological tests for assessing impacts of chemical stress to aquatic ecosystems: Facts, challenges, and future DOI Creative Commons
Lara M. Schuijt, Feng‐Jiao Peng, Sanne van den Berg

и другие.

The Science of The Total Environment, Год журнала: 2021, Номер 795, С. 148776 - 148776

Опубликована: Июль 1, 2021

Monitoring of chemicals in the aquatic environment by chemical analysis alone cannot completely assess and predict effects on species ecosystems. This is primarily because increasing number (unknown) stressors mixture present environment. In addition, ability ecological indices to identify underlying causing negative limited. Therefore, additional complementary methods are needed that can address biological a direct manner provide link exposure, i.e. (eco)toxicological tests. (Eco)toxicological tests defined as test systems expose components (cells, individuals, populations, communities) (environmental mixtures of) register effects. These measure responses at sub-organismal (biomarkers vitro bioassays), whole-organismal, population, or community level. We performed literature search obtain state-of-the-art overview ecotoxicological available for assessing impacts biota reveal datagaps. total, we included 509 biomarkers, 207 bioassays, 422 measuring whole-organismal level, 78 population- community- ecosystem-level. Tests level biomarkers were most abundant invertebrates fish, whilst bioassays mostly based mammalian cell lines. ecosystem-level almost missing organisms other than microorganisms algae. an various extrapolation challenges faced using data from these suggest some forward looking perspectives. Although extrapolating measured relevant protection goals remains challenging, combination experiments models key more comprehensive assessment

Язык: Английский

Процитировано

121

Identification and Prioritization of Environmental Organic Pollutants: From an Analytical and Toxicological Perspective DOI
Ting Ruan, Pengyang Li, Haotian Wang

и другие.

Chemical Reviews, Год журнала: 2023, Номер 123(17), С. 10584 - 10640

Опубликована: Авг. 2, 2023

Exposure to environmental organic pollutants has triggered significant ecological impacts and adverse health outcomes, which have been received substantial increasing attention. The contribution of unidentified chemical components is considered as the most knowledge gap in understanding combined effects pollutant mixtures. To address this issue, remarkable analytical breakthroughs recently made. In review, basic principles on recognition are overviewed. Complementary methodologies (i.e., quantitative structure–activity relationship prediction, mass spectrometric nontarget screening, effect-directed analysis) experimental platforms briefly described. stages technique development and/or essential parts workflow for each then reviewed. Finally, plausible paths applications future screening methods, interdisciplinary techniques achieving toxicant identification, burgeoning strategies risk assessment cocktails discussed.

Язык: Английский

Процитировано

88

The periodic table of the elements of green and sustainable chemistry DOI
Paul T. Anastas, Julie B. Zimmerman

Green Chemistry, Год журнала: 2019, Номер 21(24), С. 6545 - 6566

Опубликована: Янв. 1, 2019

Achieving a sustainable future will only be possible through the intersection of best science and technology in combination with societal, economic, policy, cultural, moral, ethical ecosystem.

Язык: Английский

Процитировано

111

Assessing the Mixture Effects in In Vitro Bioassays of Chemicals Occurring in Small Agricultural Streams during Rain Events DOI
Peta A. Neale, Georg Braun, Werner Brack

и другие.

Environmental Science & Technology, Год журнала: 2020, Номер 54(13), С. 8280 - 8290

Опубликована: Июнь 5, 2020

Rain events may impact the chemical pollution burden in rivers. Forty-four small streams Germany were profiled during several rain for presence of 395 chemicals and five types mixture effects vitro bioassays (cytotoxicity; activation estrogen, aryl hydrocarbon, peroxisome proliferator-activated receptors; oxidative stress response). While these selected to cover a wide range agricultural impacts, addition expected pesticides, wastewater-derived typical street runoff detected. The unexpectedly high estrogenic many samples indicated by wastewater or overflow combined sewer systems. 128 water exhibited diversity effect patterns, even different at same site. detected 290 explained only fraction (<8%) measured effects. experimental designed mixtures that dominate consistent with predictions concentration within factor two 94% mixtures. Overall, was much higher than previously surface dry weather, often exceeding proposed effect-based trigger values.

Язык: Английский

Процитировано

89

Toxicity identification evaluation for hydraulic fracturing flowback and produced water during shale gas exploitation in China: Evidence from tissue residues and gene expression DOI
Fan Wu, Zhimin Zhou, Shaoqiong Zhang

и другие.

Water Research, Год журнала: 2023, Номер 241, С. 120170 - 120170

Опубликована: Июнь 3, 2023

Язык: Английский

Процитировано

26

Building the Environmental Chemical-Protein Interaction Network (eCPIN): An Exposome-Wide Strategy for Bioactive Chemical Contaminant Identification DOI
Yufeng Gong, Diwen Yang, Holly Barrett

и другие.

Environmental Science & Technology, Год журнала: 2023, Номер 57(9), С. 3486 - 3495

Опубликована: Фев. 24, 2023

Although advancements in nontargeted analysis have made it possible to detect hundreds of chemical contaminants a single run, the current environmental toxicology approaches lag behind, precluding transition from analytical chemistry efforts health risk assessment. We herein highlighted recently developed "top-down" bioanalytical method, protein Affinity Purification with Nontargeted Analysis (APNA), screen for bioactive at "exposome-wide" level. To achieve this, tagged functional is employed as "bait" directly isolate mixtures, which are further identified by analysis. Advantages this protein-guided approach, including discovery new ligands well targets known contaminants, were several case studies. Encouraged these successful applications, we proposed framework, i.e., Chemical-Protein Interaction Network (eCPIN), construct complete map 7 billion binary interactions between all (>350,000) and human proteins (∼20,000) via APNA. The eCPIN could be established three stages through strategically prioritizing ∼20,000 proteins, such focusing on 48 nuclear receptors (e.g., thyroid hormone receptors) first stage. will provide an unprecedented throughput screening exposome-wide level facilitate identification molecular initiating events proteome-wide

Язык: Английский

Процитировано

25

Advancing toxicity studies of per- and poly-fluoroalkyl substances (pfass) through machine learning: Models, mechanisms, and future directions DOI

Lingxuan Meng,

Beihai Zhou,

Haijun Liu

и другие.

The Science of The Total Environment, Год журнала: 2024, Номер 946, С. 174201 - 174201

Опубликована: Июнь 25, 2024

Язык: Английский

Процитировано

11