Characterization of surface microbial communities on four seaweed species from the East China Sea

Marine Environmental Research, Год журнала: 2025, Номер 205, С. 106994 - 106994

Опубликована: Фев. 3, 2025

Язык: Английский

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Differences in microbial communities and phosphorus cycles between rural and urban lakes: Based on glyphosate and AMPA effects

Journal of Environmental Management, Год журнала: 2025, Номер 376, С. 124577 - 124577

Опубликована: Фев. 18, 2025

Язык: Английский

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Exploring bioactive compound origins: Profiling gene cluster signatures related to biosynthesis in microbiomes of Sof Umer Cave, Ethiopia

PLoS ONE, Год журнала: 2025, Номер 20(3), С. e0315536 - e0315536

Опубликована: Март 6, 2025

Sof Umer Cave is an unexplored extreme environment that hosts novel microbes and potential genetic resources. Microbiomes from caves have been genetically adapted to produce various bioactive metabolites, allowing them survive tolerate harsh conditions. However, the biosynthesis-related gene cluster signatures in microbiomes of not explored. Therefore, high-throughput shotgun sequencing was used explore clusters (BGCs) Cave. The GeneAll DNA Soil Mini Kit extract high-molecular-weight homogenized samples, purified sequenced using a NovaSeq PE150. According Micro-RN database, most common microbial genera are Protobacteria, Actinobacteria, Verrucomicrobiota, Cyanobacteria. were annotated classified, BGCs predicted antiSMASH NAPDOS1. A total 460 putative regions encoding wide range secondary metabolites identified, including RiPP (47.82%), terpene (19.57%), NRPS (13.04%), hybrid (2.18%), other newly (10.87%) compounds. Additionally, NAPDOS pipeline identified calcium-dependent antibiotic Streptomyces coelicolor, actinomycin chrysomallus, bleomycin verticillus. These findings highlight untapped biosynthetic microbiome, as well its for discovery natural products.

Язык: Английский

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Non-synergistic effects of microplastics and submerged macrophytes on sediment microorganisms involved in carbon and nitrogen cycling

Environmental Pollution, Год журнала: 2025, Номер unknown, С. 126213 - 126213

Опубликована: Апрель 1, 2025

Язык: Английский

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Metagenomics and plant-microbe symbioses: Microbial community dynamics, functional roles in carbon sequestration, nitrogen transformation, sulfur and phosphorus mobilization for sustainable soil health

Biotechnology Advances, Год журнала: 2025, Номер 82, С. 108580 - 108580

Опубликована: Апрель 15, 2025

Язык: Английский

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Seasonal dynamics and driving mechanisms of microbial biogenic elements cycling function, assembly process, and co-occurrence network in plateau lake sediments

The Science of The Total Environment, Год журнала: 2024, Номер 951, С. 175510 - 175510

Опубликована: Авг. 13, 2024

Язык: Английский

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Impact of weight variation on the microbiome of yak dams and calves

Frontiers in Microbiology, Год журнала: 2024, Номер 15

Опубликована: Сен. 18, 2024

Introduction Limited information exists regarding the microbiome composition of yak calves varying weights. Therefore, this study aimed to investigate microbiomes mother-calf pairs with different weight profiles. Methods Fecal and blood samples were collected from both lower-weight (CB) higher-weight (HB) calves, along their corresponding female yaks (CA, HA). Results The results revealed significantly higher levels T-AOC (total antioxidant capacity) GSH-Px (glutathione peroxidase) in HB animals ( p < 0.001). Sequencing yielded 652,181 643,369 filtered reads calf yaks, respectively. Alpha diversity analysis indicated that Chao1, Faith_pd, Observed species CA compared HA 0.01). Furthermore, nine genera notably between including Avispirillum, Fimenecus, CAG-1031, Odoribacter 865974, Jeotgalicoccus A 310962. Compared CB exhibited significant differences one phylum six genera, CAG-485 0.05), CAG-83 0.01), Copromorpha Phocaeicola 858004 UBA2253 0.05). Conclusion In summary, demonstrated increased oxidative resistance, profiles linked calves. These findings offer valuable insights for optimizing breeding practices high-altitude regions.

Язык: Английский

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Participation of Oxalates in Physiological Processes in Plants: Potential Role of Endophytic Bacteria–Oxalotrophs

Russian Journal of Plant Physiology, Год журнала: 2024, Номер 71(6)

Опубликована: Ноя. 22, 2024

Язык: Английский

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Участие оксалатов в физиологических процессах у растений: потенциальная роль эндофитных бактерий – оксалотрофов

Физиология растений, Год журнала: 2024, Номер 71(6), С. 649 - 665

Опубликована: Дек. 4, 2024

Язык: Русский

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