An immobilization-based, loop-mediated isothermal amplification device for nucleic acid detection of SARS-CoV-2 N gene DOI Creative Commons
Tianyu Song, Chang Chen,

Shaoheng Bao

и другие.

Biotechnology & Biotechnological Equipment, Год журнала: 2022, Номер 36(1), С. 838 - 847

Опубликована: Дек. 31, 2022

Confronting the global spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), simple, fast and specific non-laboratory SARS-CoV-2 diagnostic tests are urgently required. However, current nucleic acid assays generally rely on laboratory, trained staff specialized equipment for execution analysis, presenting clear limitations in field detection. Here, we describe a portable reliable immobilization-based loop-mediated isothermal amplification (LAMP) device which is mobile, without requirement any complicated instrument appropriate high-throughput testing. This was constructed by utilizing interaction between carboxyl-tagged primer an amino-tagged substrate, capable catching target sequence produced via LAMP. In this study, immobilization conditions immobilized structure were explored optimized. With proposed device, analysis result can be obtained rapidly 30 min with excellent specificity, even if template extracted from complex sample containing pharyngeal swab or human blood. addition, applied to detect various other pathogens, showing attractive potential rapid detection at airports, railway stations, cold-chain transportations, community hospitals so on. Therefore, believe that LAMP advanced approach developing portable, specific, low-cost platform.

Язык: Английский

Advancements in visualizing loop-mediated isothermal amplification (LAMP) reactions: A comprehensive review of colorimetric and fluorometric detection strategies for precise diagnosis of infectious diseases DOI
Arumugam Selva Sharma, Nae Yoon Lee

Coordination Chemistry Reviews, Год журнала: 2024, Номер 509, С. 215769 - 215769

Опубликована: Март 21, 2024

Язык: Английский

Процитировано

21

Highly Uniform Self-Assembly of Gold Nanoparticles by Butanol-Induced Dehydration and Its SERS Applications in SARS-CoV-2 Detection DOI
Yixuan Wu, Qian Yu,

Younju Joung

и другие.

Analytical Chemistry, Год журнала: 2023, Номер 95(34), С. 12710 - 12718

Опубликована: Авг. 18, 2023

We report the development of a reproducible and highly sensitive surface-enhanced Raman scattering (SERS) substrate using butanol-induced self-assembly gold nanoparticles (AuNPs) its application as rapid diagnostic platform for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The process was used to generate uniform assembly AuNPs, with multiple hotspots, achieve high reproducibility. When an aqueous droplet containing AuNPs target DNAs dropped onto butanol droplet, dehydration occurred, enriching around increasing loading density on AuNP surface. SERS evaluated by spectroscopy, which showed strong electromagnetic enhancement signals. then tested detection SARS-CoV-2 SERS, very low limit (LoD) 3.1 × 10-15 M obtained. This provides sufficient sensitivity screening assay, time is significantly reduced no thermocycling steps are required. study demonstrates method SARS-CoV-2. results suggest potential this approach developing platforms other biomolecules infectious diseases.

Язык: Английский

Процитировано

16

A review of current effective COVID-19 testing methods and quality control DOI Creative Commons

Lijia Cheng,

Liang Lan,

Murugan Ramalingam

и другие.

Archives of Microbiology, Год журнала: 2023, Номер 205(6)

Опубликована: Май 17, 2023

Abstract COVID-19 is a highly infectious disease caused by the SARS-CoV-2 virus, which primarily affects respiratory system and can lead to severe illness. The virus extremely contagious, early accurate diagnosis of crucial contain its spread, provide prompt treatment, prevent complications. Currently, reverse transcriptase polymerase chain reaction (RT-PCR) considered be gold standard for detecting in stages. In addition, loop-mediated isothermal amplification (LMAP), clustering rule interval short palindromic repeats (CRISPR), colloidal immunochromatographic assay (GICA), computed tomography (CT), electrochemical sensors are also common tests. However, these different methods vary greatly terms their detection efficiency, specificity, accuracy, sensitivity, cost, throughput. Besides, most current conducted central hospitals laboratories, great challenge remote underdeveloped areas. Therefore, it essential review advantages disadvantages methods, as well technology that enhance efficiency improve quality greater details.

Язык: Английский

Процитировано

15

Cascaded signal amplification strategy for ultra-specific, ultra-sensitive, and visual detection of Shigella flexneri DOI
Yaoqiang Shi, Qi Tan, Tao Gong

и другие.

Microchimica Acta, Год журнала: 2024, Номер 191(5)

Опубликована: Апрель 17, 2024

Язык: Английский

Процитировано

6

Point-of-care COVID-19 testing: colorimetric diagnosis using rapid and ultra-sensitive ramified rolling circle amplification DOI Open Access
Moon Hyeok Choi, Guralamatta Siddappa Ravi Kumara, Jaehyeon Lee

и другие.

Analytical and Bioanalytical Chemistry, Год журнала: 2022, Номер 414(19), С. 5907 - 5915

Опубликована: Июнь 17, 2022

Язык: Английский

Процитировано

21

Multiple ligation–Assisted recombinase polymerase amplification for highly sensitive and selective colorimetric detection of SARS-CoV-2 DOI Open Access
Tasnima Alam, Pradeep Kumar, Jaehyeon Lee

и другие.

Talanta, Год журнала: 2022, Номер 252, С. 123835 - 123835

Опубликована: Авг. 14, 2022

Язык: Английский

Процитировано

7

Multiple gene detection using a selective fluorophore probe–RNA hybridization/graphene oxide quenching system DOI
Tasnima Alam, Young Jun Seo

The Analyst, Год журнала: 2023, Номер 148(15), С. 3622 - 3631

Опубликована: Янв. 1, 2023

Herein, we introduce a novel assay for multiple-gene recognition by ligation-double transcription mediated fluorometric profiling. We demonstrated the capability of system to identify potential multi-gene classifiers diagnostic use employing combination approach with selective fluorophore probe-RNA hybridization/graphene oxide quenching system. The is efficient and requires only 45 minutes total experimentation offers high sensitivity (369.6, 408, 407.8 copies per mL O, E, N genes SARS-CoV-2, respectively) specificity (selective until two mismatches). Our expected expedite precise diagnosis RNA-virus-related diseases multiple gene classifiers. By focusing on distinct viral genes, our method allowed detection various RNA viruses in variety sample pools.

Язык: Английский

Процитировано

4

Light-Driven Photocatalytic–Photothermal Synergetic System for Portable and Sensitive Nucleic Acid Quantification DOI
Shan He,

Huiting Lian,

Xuegong Cao

и другие.

Analytical Chemistry, Год журнала: 2023, Номер 95(48), С. 17613 - 17621

Опубликована: Ноя. 18, 2023

Photosensitizers and photothermal agents have attracted increasing attention for in vitro diagnosis, but the combination remains challenging. Herein, a light-driven photocatalytic–photothermal synergetic system integrated microfluidic distance-based analytical device (PCPT-μDAD) visual, portable, sensitive, quantitative detection of targets was developed. Target DNA recognized initiated hybridization chain reaction to form double-stranded DNA/SYBR Green I (dsDNA/SG-I) complex. By applying photosensitization dsDNA/SG-I complex effect oxidized 3,3′,5,5′-tetramethylbenzidine, target concentration can effectively translate into visual distance signal readout. Importantly, PCPT-μDAD greatly improves controllability catalytic reactions amplification efficiency. The shows low limit (fM level), good stability, high reproducibility nucleic acid detection.

Язык: Английский

Процитировано

4

I-motif sensor for the fluorometric detection of Monkeypox DOI
Tasnima Alam, Young Jun Seo

The Analyst, Год журнала: 2024, Номер 149(17), С. 4514 - 4524

Опубликована: Янв. 1, 2024

In this study, we developed an isothermal fluorometric diagnostic method for DNA virus-generating disorders such as Mpox. Our results showed that the release of a large number protons during multiplex-LAMP markedly lowered pH level, which transformed retinoblastoma (Rb) linear ssDNA into i-motifs. Consequently, thiazole orange (TO; probe sensitive to i-motif) boosted signal-on fluorescence because its ability bind selectively This multiplex-LAMP/i-motif-TO system enabled simultaneous detection aimed at numerous potential targets with remarkable sensitivity (1.47 pg per mL) and efficiency (30 minutes). is expected enable DNA-virus-related diseases be efficiently accurately assessed.

Язык: Английский

Процитировано

1

Advances in ligase-based nucleic acid amplification technology for detecting gene mutations: a review DOI Open Access
Ying Li,

Xiangjun Wang,

Minghui Wang

и другие.

Molecular and Cellular Biochemistry, Год журнала: 2022, Номер 478(7), С. 1621 - 1631

Опубликована: Ноя. 28, 2022

Язык: Английский

Процитировано

6