Persoonia - Molecular Phylogeny and Evolution of Fungi,
Год журнала:
2024,
Номер
52(1), С. 44 - 93
Опубликована: Май 11, 2024
Oceanic
islands
have
been
recognized
as
natural
laboratories
in
which
to
study
a
great
variety
of
evolutionary
processes.
One
such
process
is
radiations,
the
diversification
single
ancestor
into
number
species
that
inhabit
different
environments
and
differ
traits
allow
them
exploit
those
environments.
The
factors
drive
radiations
studied
for
decades
charismatic
organisms
birds
or
lizards,
but
are
lacking
lichen-forming
fungi,
despite
recent
reports
some
lineages
showing
patterns
congruent
with
radiation.
Here
we
propose
Fungal Diversity,
Год журнала:
2024,
Номер
125(1), С. 1 - 71
Опубликована: Март 20, 2024
Abstract
The
field
of
mycology
has
grown
from
an
underappreciated
subset
botany,
to
a
valuable,
modern
scientific
discipline.
As
this
study
grown,
there
have
been
significant
contributions
science,
technology,
and
industry,
highlighting
the
value
fungi
in
era.
This
paper
looks
at
current
research,
along
with
existing
limitations,
suggests
future
areas
where
scientists
can
focus
their
efforts,
mycology.
We
show
how
become
important
emerging
diseases
medical
discuss
trends
potential
drug
novel
compound
discovery.
explore
phylogenomics,
its
potential,
outcomes
address
question
phylogenomics
be
applied
fungal
ecology.
In
addition,
functional
genomics
studies
are
discussed
importance
unravelling
intricate
mechanisms
underlying
behaviour,
interactions,
adaptations,
paving
way
for
comprehensive
understanding
biology.
look
research
building
materials,
they
used
as
carbon
sinks,
biocircular
economies.
numbers
always
great
interest
often
written
about
estimates
varied
greatly.
Thus,
we
needs
order
obtain
more
reliable
estimates.
aspects
machine
learning
(AI)
it
mycological
research.
Plant
pathogens
affecting
food
production
systems
on
global
scale,
such,
needed
area,
particularly
disease
detection.
latest
data
High
Throughput
Sequencing
if
still
gaining
new
knowledge
same
rate
before.
A
review
nanotechnology
is
provided
addressed.
Arbuscular
Mycorrhizal
Fungi
addressed
acknowledged.
Fungal
databases
becoming
important,
therefore
provide
major
databases.
Edible
medicinal
huge
medicines,
especially
Asia
prospects
discussed.
Lifestyle
changes
(e.g.,
endophytes,
pathogens,
and/or
saprobes)
also
extremely
trend
special
issue
Diversity.
Fungal Diversity,
Год журнала:
2022,
Номер
116(1), С. 547 - 614
Опубликована: Сен. 1, 2022
Fungi
are
an
understudied
resource
possessing
huge
potential
for
developing
products
that
can
greatly
improve
human
well-being.
In
the
current
paper,
we
highlight
some
important
discoveries
and
developments
in
applied
mycology
interdisciplinary
Life
Science
research.
These
examples
concern
recently
introduced
drugs
treatment
of
infections
neurological
diseases;
application
-OMICS
techniques
genetic
tools
medical
regulation
mycotoxin
production;
as
well
highlights
mushroom
cultivaton
Asia.
Examples
new
diagnostic
exploitation
candidates
therapeutic
drugs,
also
given.
addition,
two
entries
illustrating
latest
use
fungi
biodegradation
fungal
biomaterial
production
provided.
Some
other
areas
where
there
have
been
and/or
will
be
significant
included.
It
is
our
hope
this
paper
help
realise
importance
a
industrial
see
next
decades
bring
forward
many
fungus-derived
products.
Frontiers in Microbiology,
Год журнала:
2022,
Номер
13
Опубликована: Ноя. 29, 2022
As
a
result
of
phylogenomic,
phylogenetic,
and
morphological
analyses
members
the
genus
Claroideoglomus
,
four
potential
new
glomoid
spore-producing
species
Entrophospora
infrequens
order,
Entrophosporales,
with
one
family,
Entrophosporaceae
(=Claroideoglomeraceae),
was
erected
in
phylum
Glomeromycota.
The
phylogenomic
recovered
Entrophosporales
as
sister
to
clade
formed
by
Diversisporales
Glomeraceae.
strongly
conserved
entrophosporoid
morph
E.
provided
newly
designated
epitype,
shown
represent
group
cryptic
produce
different
morphs.
Of
species,
three
enriched
argentinensis,
glacialis
furrazolae
which
originated
from
Argentina,
Sweden,
Oman,
Poland.
fourth
fungus
appeared
be
epitype.
physical
association
morphs
reported
illustrated
here
for
first
time.
phylogenetic
analyses,
using
nuc
rDNA
rpb1
concatenated
sequences,
confirmed
previous
conclusion
that
Albahypha
family
sensu
Oehl
et
al.
is
an
unsupported
taxon.
Finally,
descriptions
Glomerales,
Entrophosporaceae,
were
emended
nomenclatural
combinations
introduced.
Journal of Fungi,
Год журнала:
2023,
Номер
9(1), С. 116 - 116
Опубликована: Янв. 14, 2023
Depsides
and
tridepsides
are
secondary
metabolites
found
in
lichens.
In
the
last
10
years,
there
has
been
a
growing
interest
pharmacological
activity
of
these
compounds.
This
review
aims
to
discuss
research
findings
related
biological
effects
mechanisms
action
lichen
depsides
tridepsides.
The
most
studied
compound
is
atranorin,
followed
by
gyrophoric
acid,
diffractaic
lecanoric
acid.
Antioxidant,
cytotoxic,
antimicrobial
activities
among
investigated
activities,
mainly
vitro
studies,
with
occasional
silico
vivo
studies.
Clinical
trials
have
not
conducted
using
Therefore,
future
should
focus
on
conducting
more
work
clinical
trials,
as
well
evaluating
other
activities.
Moreover,
despite
significant
increase
pharmacology
tridepsides,
many
compounds
which
yet
be
(e.g.,
hiascic
lassalic
ovoic
crustinic
hypothamnolic
acid).
New Phytologist,
Год журнала:
2023,
Номер
241(3), С. 969 - 971
Опубликована: Ноя. 29, 2023
Lichen-forming
fungi
and
their
algal
symbionts
together
produce
composite
thalli
that
often
have
the
appearance
properties
of
unitary
organisms.
Although
exact
contours
concept
may
vary
according
to
viewpoint,
lichens
been
commonly
distinguished
from
other
fungal–algal
symbioses
by
a
useful
widely
cited
definition
(Hawksworth,
1988;
Hawksworth
&
Honegger,
1994),
wherein
mycobiont
comprises
external
component
(exhabitant)
houses
interior
but
extracellular
symbiont(s).
More
recently,
increased
attention
has
focused
on
additional
microorganisms,
particularly
bacteria,
form
part
lichen
thallus
microbiome
(Grube
et
al.,
2015;
Spribille
2016;
Cernava
2017;
Smith
2020;
Tzovaras
Cometto
2022).
This
revealed
new
dimension
biology,
similar
recognizable
in
plants
animals
as
diverse
microbial
inhabitants
internal
surfaces
are
explored
(Porras-Alfaro
Bayman,
2011;
Ezenwa
2012;
Gilbert
2018).
Such
research
highlights
degree
which
biological
communities
coexist
at
very
different
scales.
A
plant,
an
animal,
all
components
broader
community
interacting
macro-organisms,
while
finer
level
organization,
each
individually
harbor
its
own
or
communities.
changed
how
we
think
about
animals,
it
not
resulted
any
effort
redefine
them.
By
contrast,
number
biologists
recently
proposed
expanding
include
microorganisms
colonize
thallus.
These
proposals,
indeed
question
whether
is
warranted
desirable,
ought
be
considered
critically.
Grube
(2020)
ecosystem
formed
interaction
exhabitant
fungus,
photosynthetic
partners,
indeterminate
microorganisms.
interpretation
elevates
defining
status
equivalent
photobiont(s),
even
though
roles
significance
still
poorly
understood
critical
importance
symbiosis
far
proven.
It
merges
into
one
same
concept,
treatment
suffered
plant
animal.
Of
course,
Lücking
al.
(2021)
point
out,
lichen's
relationship
might
viewed
differently,
since,
unlike
already
defined
partnership
But
consider
mycorrhiza,
frequently
compared.
The
rhizosphere/hyphosphere
likewise
harbors
can
make
significant
contributions
(e.g.
Wang
2023)
yet
do
figure
mycorrhiza.
omission
these
associates
does
imply
they
unimportant.
merely
indicates
core
between
fungus
photoautotroph
remains
meaningful
itself,
prefer
lose.
Structurally
physiologically,
quite
intimately
associated;
photobionts
induced
release
massive
amounts
carbohydrate
(Richardson
1968;
Smith,
1980),
channeled
apoplastically
pathways
sealed
with
fungus-derived
hydrophobic
materials
(Honegger,
1991;
Trembley
2002).
At
present,
there
no
reason
believe
inhabitant
comparable
integration,
if
some
provide
important
services.
structure
photobiont
create
physical
habitat
within
associated
dwell.
If
demonstrated
essential
transformative
development
thallus,
then
inclusion
justified.
argument
was
for
cyphobasidialean
yeasts
associate
certain
macrolichens
(Spribille
2016),
follow-up
studies
found
low
co-occurrence
(Lendemer
2019;
2020)
lower
specificity
proper
than
shown
(Mark
2020).
appropriately
cautious
claims
members
co-equal
partners
symbiosis.
therefore
comes
surprise
feel
needs
amended.
In
redefining
ecosystem,
implicitly
expand
further.
proposal
ecosystems
appears
originated
Farrar
(1976),
although
author
did
evidence
organisms
were
besides
principal
fungal
symbionts.
recent
years,
application
term
individual
become
more
common
diversity
increasingly
appreciated
2009;
Cardinale
Pankratov
Škvorová
this
usage
seem
take
account
refers
organization
above
community.
coined
(by
founder
New
Phytologist)
explicitly
key
chemical
environment
biotic
sustain
(Tansley,
1935).
Contemporary
ecology
textbooks
maintain
Ricklefs,
2008).
To
define
–
micro-ecosystem
would
require
mineral,
soil
substratum
upon
grows,
least.
While
such
elements
clearly
relevant
utility
making
them
features
questionable.
For
most
biologists,
removed
lichen.
Other
modifications
(2021),
who
summary
previously
published
definitions
extensive
discussion
criteria.
Their
makes
reference
ecosystems,
add
limited
those
bacteria
regarded
‘obligately
associated’.
obligate
whom:
organism
symbiosis?
Most,
all,
themselves
obligately
lichen-forming
fungi,
improves
odds
survival
many
microhabitats.
Without
them,
however,
you
On
hand,
mycobiont–photobiont
unresolved
present.
also
primary
fungus-like
organism,
apparently
deference
theoretical
possibility
oomycete–algal
exist
existed
could
conceivably
fit
criteria
lichenhood.
extensions
plausible
entirely
hypothetical
cases
integrate
With
risk
circular
reasoning.
intend
critically
examine
involve
indispensable
participants,
mycobionts
true
counterproductive
work
recognized
hypotheticals
features.
further
‘reconceptualize
symbioses’
(Allen
Lendemer,
2022),
authors
suggest
changes
Because
myriad
variations
every
theme
natural
world
rarely
neatly
human
conceptual
schemes,
imperfect,
arbitrary,
and/or
amended
exceptions.
what
matters.
so
proven
distinguish
macrostructure
creates
redefined
broadly
encompass
microbiome,
mention
factors
support
community,
refer
specifically
symbiotic
photobiont.
Before
dissolve
fundamental
nebulous
boundaries,
should
first
convincing
indications
obsolete.
new,
always
accommodated
holobiome);
need
replace
current
one.
fact
lichens,
like
mycorrhizas,
whose
symbiosis,
itself
mean
All
minuscule
fraction
healthy
biomass
(excepting
embedded
substratum)
consists
produce.
Just
sorts
comprise
remainder,
play,
currently
subjects
much
interesting
research.
present
element
components.
Subtract
photobiont,
identity
lost.
They
elements,
least
now.
thanks
Drs
Sergio
Pérez
Ortega
Raquel
Pino
Bodas
helpful
topic.
manuscript
benefited
review
two
anonymous
referees.
None
declared.
MycoKeys,
Год журнала:
2025,
Номер
114, С. 259 - 276
Опубликована: Март 4, 2025
Two
additional
species
of
Sticta
are
described
as
new
to
science
based
on
material
from
Bolivia
and
Peru
supported
by
phylogenetic
analysis
the
fungal
ITS
barcoding
marker.
The
two
represent
lineages
within
clade
I
global
phylogeny.
Stictaflakusiorum
Ossowska,
B.
Moncada
&
Lücking
is
a
in
S.humboldtii
morphodeme
characterized
lobes
partly
entirely
covered
with
white
hairs,
also
covering
margins
submarginal
laminal
apothecia,
scabrid
basal
membrane
cyphellae,
which
yellow,
or
brown,
when
yellow
K+
purple.
taxon
was
discovered
at
single
locality
Bolivia,
but
it
closely
related
potentially
Peru,
here
left
undescribed.
other
species,
S.kukwae
Magain
Sérus.,
belongs
S.weigelii
morphodeme.
It
has
sinuous
dark,
palmate
corymbose
phyllidia.
collected
several
locations
Bolivia.