Horticultural Plant Journal,
Год журнала:
2023,
Номер
10(6), С. 1371 - 1382
Опубликована: Июль 22, 2023
Tomato
(Solanum
lycopersicum),
an
economically
important
vegetable
crop
cultivated
worldwide,
often
suffers
massive
financial
losses
due
to
Phytophthora
infestans
(P.
infestans)
spread
and
breakouts.
Arbuscular
mycorrhiza
(AM)
fungi
mediated
biocontrol
has
demonstrated
great
potential
in
plant
resistance.
However,
little
information
is
available
on
the
regulation
of
mycorrhizal
tomato
resistance
against
P.
infestans.
Therefore,
microRNAs
(miRNAs)
sequencing
technology
was
used
analyse
miRNA
their
targets
after
infection.
Our
study
showed
a
lower
severity
necrotic
lesions
than
nonmycorrhizal
controls.
We
investigated
35
miRNAs
that
opposite
expression
tendency
infection
when
compared
with
uninfected
Among
them,
miR319c
upregulated
leaves
pathogen
Overexpression
or
silencing
its
target
gene
(TCP1)
increased
infestans,
implying
acts
as
positive
regulator
Additionally,
we
examined
induced
patterns
TCP1
plants
exposed
salicylic
acid
(SA)
treatment,
SA
content
levels
SA-related
genes
were
also
measured
overexpressing
transgenic
plants.
The
result
revealed
can
not
only
participates
by
regulating
content,
but
indirectly
regulates
key
pathway
TCP1.In
this
study,
propose
novel
mechanism
which
increases
International Journal of Molecular Sciences,
Год журнала:
2022,
Номер
23(8), С. 4124 - 4124
Опубликована: Апрель 8, 2022
Plant
growth
and
development
are
greatly
affected
by
the
environment.
Many
genes
have
been
identified
to
be
involved
in
regulating
plant
adaption
of
abiotic
stress.
Apart
from
protein-coding
genes,
more
evidence
indicates
that
non-coding
RNAs
(ncRNAs),
including
small
long
ncRNAs
(lncRNAs),
can
target
developmental
stress-responsive
mRNAs,
regulatory
DNA
regions,
proteins
regulate
transcription
various
at
transcriptional,
posttranscriptional,
epigenetic
level.
Currently,
molecular
mechanisms
sRNAs
lncRNAs
controlling
response
being
deeply
explored.
In
this
review,
we
summarize
recent
research
progress
plants,
focusing
on
signal
factors,
expression
characters,
targets
functions,
interplay
network
their
stress
responses.
The
complex
pathways
among
RNAs,
lncRNAs,
plants
also
discussed.
Understanding
functional
implications
responses
will
benefit
us
regard
use
as
potential
character-determining
factors
breeding.
Frontiers in Plant Science,
Год журнала:
2023,
Номер
13
Опубликована: Янв. 11, 2023
Plants
are
continuously
exposed
to
various
biotic
and
abiotic
stresses
in
the
natural
environment.
To
cope
with
these
stresses,
they
have
evolved
a
multitude
of
defenses
mechanisms.
With
rapid
development
genome
sequencing
technologies,
large
number
non-coding
RNA
(ncRNAs)
been
identified
tomato,
like
microRNAs
(miRNAs)
long
RNAs
(lncRNAs).
Recently,
more
evidence
indicates
that
many
ncRNAs
involved
plant
response
tomato.
In
this
review,
we
summarize
recent
updates
on
regulatory
roles
tomato
abiotic/biotic
responses,
including
(high
temperature,
drought,
cold,
salinization,
etc.)
(bacteria,
fungi,
viruses,
insects,
stresses.
Understanding
molecular
mechanisms
mediated
by
will
help
us
clarify
future
directions
for
ncRNA
research
resistance
breeding
PLoS Pathogens,
Год журнала:
2023,
Номер
19(5), С. e1011340 - e1011340
Опубликована: Май 11, 2023
Robust
plant
immune
systems
are
fine-tuned
by
both
protein-coding
genes
and
non-coding
RNAs.
Long
RNAs
(lncRNAs)
refer
to
with
a
length
of
more
than
200
nt
usually
do
not
have
function
belong
any
other
well-known
RNA
types.
The
non-protein-coding,
low
expression,
non-conservative
characteristics
lncRNAs
restrict
their
recognition.
Although
studies
in
plants
the
early
stage,
emerging
shown
that
employ
regulate
immunity.
Moreover,
response
stresses,
numerous
differentially
expressed,
which
manifests
actions
low-expressed
makes
plant–microbe/insect
interactions
convenient
system
study
functions
lncRNAs.
Here,
we
summarize
current
advances
lncRNAs,
discuss
regulatory
effects
different
stages
immunity,
highlight
roles
diverse
interactions.
These
insights
will
only
strengthen
our
understanding
but
also
provide
novel
insight
into
responses
basis
for
further
research
this
field.
New Crops,
Год журнала:
2024,
Номер
2, С. 100044 - 100044
Опубликована: Авг. 28, 2024
Climate
change
poses
a
major
challenge
to
agriculture,
affecting
crop
production
through
shifting
weather
patterns
and
an
increase
in
extreme
conditions
such
as
heat
waves,
droughts,
floods,
all
of
which
are
further
compounded
by
biotic
stress
factors.Tomatoes,
vital
dietary
staple
significant
agricultural
product
worldwide,
particularly
susceptible
these
changes.The
need
for
developing
climate-resilient
tomato
varieties
is
more
urgent
than
ever
ensure
food
security.Epigenetic
modifications,
DNA
methylation
histone
play
essential
roles
gene
expression
regulation.These
modifications
can
affect
plant
traits
responses
environmental
stresses,
enabling
tomatoes
maintain
productivity
despite
variable
climates
or
disease
pressures.Tomato,
model
plant,
offers
valuable
insights
into
the
epigenetic
mechanisms
underlying
fruit
development
stress.This
review
provides
overview
key
discoveries
regarding
response
resilience
related
epigenetics,
highlighting
their
potential
breeding
strategies
enhance
against
both
abiotic
challenges,
thereby
promoting
sustainable
practices
context
global
climate
change.
Horticulturae,
Год журнала:
2025,
Номер
11(1), С. 31 - 31
Опубликована: Янв. 2, 2025
Gummy
stem
blight
(GSB),
caused
by
Stagonosporopsis
cucurbitacearum
(Didymella
bryoniae),
poses
a
growing
threat
to
greenhouse
melon
production.
Despite
this,
the
defense
mechanism
of
against
S.
remains
poorly
understood.
In
this
study,
employing
electron
microscopy
and
transcriptome
sequencing,
we
investigated
cellular
ultrastructure
differences
gene
expression
dynamics
two
accessions,
PI
420145
(resistant
GSB)
‘Baipicui’
(susceptible),
pre-
post-
inoculation.
Our
results
revealed
that
exhibits
thicker
waxy
layer
on
leaf
surface
limited
conidial
germination
without
obvious
signs
cell
damage
compared
‘Baipicui’.
The
transcriptomic
analysis
identified
total
23,078
differentially
expressed
genes
(DEGs)
974
long
noncoding
RNAs
(DELs).
Specifically,
phenylpropanoid
biosynthesis,
cyanoamino
acid
metabolism,
MAPK
signaling–plant
plant–pathogen
interactions
were
enriched
in
420145,
while
displayed
enrichment
metabolism
autophagy.
Additionally,
through
lncRNA–mRNA
network
construction,
38
targeted
regulatory
relationships
four
most
significant
KEGG
pathways
for
disease
resistance.
Journal of Experimental Botany,
Год журнала:
2022,
Номер
74(7), С. 2364 - 2373
Опубликована: Дек. 23, 2022
Abstract
Long
non-coding
RNAs
(lncRNAs)
are
a
group
of
greater
than
200
nucleotides
in
length
exhibiting
low
or
no
coding
potential
that
involved
diverse
biological
functions
through
their
molecular
interaction
with
proteins,
DNA,
other
RNAs.
With
the
emergence
advanced
high-throughput
RNA
sequencing
technologies,
tens
thousands
novel
long
have
been
identified
plant
transcriptomes
last
decade.
More
importantly,
functional
studies
revealed
several
lncRNAs
play
key
regulatory
roles
development
and
stress
responses.
In
this
review,
we
focus
on
summarizing
recent
progress
uncovering
mechanisms
during
life
cycle,
briefly
discuss
possible
biotechnological
applications
for
breeding.
Plant Communications,
Год журнала:
2024,
Номер
5(7), С. 100927 - 100927
Опубликована: Апрель 27, 2024
Long
non-coding
RNAs
(lncRNAs)
have
emerged
as
integral
gene-expression
regulators
underlying
plant
growth,
development,
and
adaptation.
To
adapt
to
the
heterogeneous
dynamic
rhizosphere,
plants
use
interconnected
regulatory
mechanisms
optimally
fine-tune
gene-expression-governing
interactions
with
soil
biota,
well
nutrient
acquisition
heavy
metal
tolerance.
Recently,
high-throughput
sequencing
has
enabled
identification
of
lncRNAs
responsive
rhizosphere
biotic
abiotic
cues.
Here,
we
examine
lncRNA
biogenesis,
classification,
mode
action,
highlighting
functions
in
mediating
adaptation
diverse
factors.
We
then
discuss
studies
that
reveal
significance
target
genes
during
developmental
plasticity
stress
responses
at
rhizobium
interface.
A
comprehensive
understanding
specific
lncRNAs,
their
targets,
intricacies
functional
interaction
networks
will
provide
crucial
insights
into
how
these
transcriptomic
switches
shifting
signals.
Looking
ahead,
foresee
single-cell
dissection
cell-type-specific
dynamics
enhance
our
precise
modulation
enable
Overcoming
future
challenges
through
multi-omics
genetic
approaches
more
fully
roles
governing
belowground
environment.
Plants,
Год журнала:
2023,
Номер
12(3), С. 669 - 669
Опубликована: Фев. 3, 2023
The
application
of
miRNA
mimic
technology
for
silencing
mature
began
in
2007.
This
technique
originated
from
the
discovery
INDUCED
BY
PHOSPHATE
STARVATION
1
(IPS1)
gene,
which
was
found
to
be
a
competitive
that
prevents
cleavage
targeted
mRNA
by
inhibition
at
post-transcriptional
level.
To
date,
various
studies
have
been
conducted
understand
molecular
mechanism
and
improve
efficiency
this
technology.
As
result,
several
tools
developed:
target
mimicry
(TM),
short
tandem
(STTM),
sponges
(SPs).
STTM
is
most-developed
tool
due
its
stability
effectiveness
decoying
miRNA.
review
discusses
on
loss-of-function
members
diverse
plant
species.
A
modified
approach
studying
function
with
spatial–temporal
expression
under
control
specific
promoters
further
explored.
will
enhance
our
understanding
activity
plant-tissue-specific
development
stress
responses
applications
improving
traits
via
regulation.