Shared enhancer gene regulatory networks between wound and oncogenic programs DOI Creative Commons
Swann Floc’hlay,

Ramya Balaji,

Dimitrije Stanković

и другие.

eLife, Год журнала: 2023, Номер 12

Опубликована: Май 3, 2023

Wound response programs are often activated during neoplastic growth in tumors. In both wound repair and tumor growth, cells respond to acute stress balance the activation of multiple programs, including apoptosis, proliferation, cell migration. Central those responses JNK/MAPK JAK/STAT signaling pathways. Yet, what extent these cascades interact at cis-regulatory level how they orchestrate different regulatory phenotypic is still unclear. Here, we aim characterize states that emerge cooperate response, using Drosophila melanogaster wing disc as a model system, compare with cancer induced by rasV12scrib-/- eye disc. We used single-cell multiome profiling derive enhancer gene networks (eGRNs) integrating chromatin accessibility expression signals. identify 'proliferative' eGRN, active majority wounded controlled AP-1 STAT. smaller, but distinct population cells, 'senescent' eGRN driven C/EBP-like transcription factors (Irbp18, Xrp1, Slow border, Vrille) Scalloped. These two signatures found be levels. Our eGRNs resource offers an in-depth characterization senescence markers, together new perspective on shared acting oncogenesis.

Язык: Английский

Emerging mechanisms of cell competition DOI
Nicholas E. Baker

Nature Reviews Genetics, Год журнала: 2020, Номер 21(11), С. 683 - 697

Опубликована: Авг. 10, 2020

Язык: Английский

Процитировано

199

Protein translation: biological processes and therapeutic strategies for human diseases DOI Creative Commons

Xuechao Jia,

Xinyu He,

Chuntian Huang

и другие.

Signal Transduction and Targeted Therapy, Год журнала: 2024, Номер 9(1)

Опубликована: Фев. 23, 2024

Abstract Protein translation is a tightly regulated cellular process that essential for gene expression and protein synthesis. The deregulation of this increasingly recognized as critical factor in the pathogenesis various human diseases. In review, we discuss how deregulated can lead to aberrant synthesis, altered functions, disease progression. We explore key mechanisms contributing translation, including functional alterations factors, tRNA, mRNA, ribosome function. Deregulated leads abnormal expression, disrupted signaling, perturbed functions- all which contribute pathogenesis. development profiling techniques along with mass spectrometry-based proteomics, mRNA sequencing single-cell approaches have opened new avenues detecting diseases related errors. Importantly, highlight recent advances therapies targeting translation-related disorders their potential applications neurodegenerative diseases, cancer, infectious cardiovascular Moreover, growing interest lies targeted aimed at restoring precise control over diseased cells discussed. conclusion, comprehensive review underscores role its therapeutic target. Advancements understanding molecular deregulation, coupled therapies, offer promising improving outcomes Additionally, it will unlock doors possibility precision medicine by offering personalized deeper underpinnings future.

Язык: Английский

Процитировано

26

Distinct modes of cell competition shape mammalian tissue morphogenesis DOI
Stephanie J. Ellis,

Nicholas C. Gomez,

John M. Levorse

и другие.

Nature, Год журнала: 2019, Номер 569(7757), С. 497 - 502

Опубликована: Май 1, 2019

Язык: Английский

Процитировано

142

Proteotoxic stress is a driver of the loser status and cell competition DOI
M. Baumgartner, Michael Dinan, Paul F. Langton

и другие.

Nature Cell Biology, Год журнала: 2021, Номер 23(2), С. 136 - 146

Опубликована: Янв. 25, 2021

Язык: Английский

Процитировано

83

Ribosomopathy-associated mutations cause proteotoxic stress that is alleviated by TOR inhibition DOI
Carles Recasens-Alvarez,

Cyrille Alexandre,

Joanna Kirkpatrick

и другие.

Nature Cell Biology, Год журнала: 2021, Номер 23(2), С. 127 - 135

Опубликована: Янв. 25, 2021

Язык: Английский

Процитировано

63

Ribosome biogenesis and function in development and disease DOI Open Access
Chunyang Ni, Michael Buszczak

Development, Год журнала: 2023, Номер 150(5)

Опубликована: Март 1, 2023

ABSTRACT Although differential transcription drives the development of multicellular organisms, ultimate readout a protein-coding gene is ribosome-dependent mRNA translation. Ribosomes were once thought as uniform molecular machines, but emerging evidence indicates that complexity and diversity ribosome biogenesis function should be given fresh look in context development. This Review begins with discussion different developmental disorders have been linked perturbations production function. We then highlight recent studies reveal how cells tissues exhibit variable levels protein synthesis, changes synthesis capacity can influence specific cell fate decisions. finish by touching upon heterogeneity stress responses These discussions importance considering both functional specialization disease.

Язык: Английский

Процитировано

29

Xrp1 is a transcription factor required for cell competition-driven elimination of loser cells DOI Creative Commons

Ludovic Baillon,

Federico Germani,

Claudia Rockel

и другие.

Scientific Reports, Год журнала: 2018, Номер 8(1)

Опубликована: Дек. 3, 2018

The elimination of unfit cells from a tissue is process known in Drosophila and mammals as cell competition. In well-studied paradigm "loser" that are heterozygous mutant for haploinsufficient ribosomal protein gene eliminated developing tissues via apoptosis when surrounded by fitter wild-type cells, referred to "winner" cells. However, the mechanisms underlying induction this phenomenon not fully understood. Here we report CCAAT-Enhancer-Binding Protein (C/EBP), Xrp1, which help maintaining genomic stability after genotoxic stress, necessary loser clones Xrp1 transcriptionally upregulated an autoregulatory loop able trigger - driving elimination. We further show acts nucleus regulate transcription several genes have been previously involved therefore speculate might play fundamental role molecular caretaker integrity tissues.

Язык: Английский

Процитировано

74

Inter-Organ Growth Coordination Is Mediated by the Xrp1-Dilp8 Axis in Drosophila DOI Creative Commons
Laura Boulan, Ditte S. Andersen, Julien Colombani

и другие.

Developmental Cell, Год журнала: 2019, Номер 49(5), С. 811 - 818.e4

Опубликована: Апрель 18, 2019

Язык: Английский

Процитировано

66

Cell Competition Is Driven by Autophagy DOI Creative Commons
Rina Nagata, Mai Nakamura, Yuya Sanaki

и другие.

Developmental Cell, Год журнала: 2019, Номер 51(1), С. 99 - 112.e4

Опубликована: Сен. 19, 2019

Язык: Английский

Процитировано

65

Cell competition: Emerging mechanisms to eliminate neighbors DOI Open Access
Rina Nagata, Tatsushi Igaki

Development Growth & Differentiation, Год журнала: 2018, Номер 60(9), С. 522 - 530

Опубликована: Ноя. 15, 2018

Cell competition is a context-dependent cell elimination through short-range cell-cell interaction, in which cells with higher fitness eliminate neighboring less-fit or oncogenic within the growing tissue. can be triggered by many different factors such as heterozygous mutations ribosomal protein genes (which are called "Minute" mutations), elevated Myc, Yorkie/YAP, Wg/Wnt, JAK-STAT, Ras, Src activity, and loss of Mahjong/VprBP, endocytic pathway components, apicobasal polarity. Studies on mechanisms roles have suggested that divided into two types: selection fitter cells. The former type includes Minute Myc-induced considered to dependent relative level synthesis. later tumor-suppressive polarity scribble (scrib) discs large (dlg). Genetic studies Drosophila during past decade provided significant progress understanding these phenomena. At same time, now raised new questions; how do contribute cooperate drive competition, common exist types what physiological phenomena?

Язык: Английский

Процитировано

63