Distinct metabolite classes in root exudates are indicative for field- or hydroponically-grown cover crops DOI Creative Commons
Diana Heuermann, Stefanie Döll,

Dörte Schweneker

и другие.

Frontiers in Plant Science, Год журнала: 2023, Номер 14

Опубликована: Апрель 6, 2023

Plants release a large variety of metabolites via their roots to shape physico-chemical soil properties and biological processes in the rhizosphere. While hydroponic growth conditions facilitate accessibility root system recovery exudates, natural environment can alter metabolism exudate secretion, raising question what extent quantity composition exudates released systems reflect those recovered from soil-grown roots.Using washing method, we sampled four field-grown cover crop species with wide taxonomic distance, namely white mustard, lacy phacelia, bristle oat, Egyptian clover. A set primary secondary were analysed targeted untargeted LC-MS-based approach, respectively, for comparison obtained hydroponically cultured plants.We found that cultivated plants larger amount total carbon, but carbon was not indicative diversity exudates. In field, phacelia clover contained 2.4 3.8 times more metabolites, whereas exudation hydroponics 5- 4-fold higher. The identified using approach much distinct among all than quantified metabolites. Among metabolite classes, presence lipids lipid-like molecules highly field samples, while phenylpropanoids, organoheterocyclic compounds or benzenoids characteristic clover, mustard irrespective cultivation condition. However, at compound level bulk specific every species, which implies poorly metabolic complexity plants.

Язык: Английский

The molecular mechanism of plasma membrane H+-ATPases in plant responses to abiotic stress DOI
Jing Li, Yan Guo, Yongqing Yang

и другие.

Journal of genetics and genomics/Journal of Genetics and Genomics, Год журнала: 2022, Номер 49(8), С. 715 - 725

Опубликована: Май 30, 2022

Язык: Английский

Процитировано

51

The transcription factor MYB110 regulates plant height, lodging resistance, and grain yield in rice DOI
Tingting Wang, Yi Jin, Lixiao Deng

и другие.

The Plant Cell, Год журнала: 2023, Номер 36(2), С. 298 - 323

Опубликована: Окт. 17, 2023

Abstract The high-yielding Green Revolution varieties of cereal crops are characterized by a semidwarf architecture and lodging resistance. Plant height is tightly regulated the availability phosphate (Pi), yet underlying mechanism remains obscure. Here, we report that rice (Oryza sativa) R2R3-type Myeloblastosis (MYB) transcription factor MYB110 Pi-dependent negative regulator plant height. direct target PHOSPHATE STARVATION RESPONSE 2 (OsPHR2) regulates OsPHR2-mediated inhibition Inactivation increased culm diameter bending resistance, leading to enhanced resistance despite Strikingly, grain yield myb110 mutants was elevated under both high- low-Pi regimes. Two divergent haplotypes based on single nucleotide polymorphisms in putative promoter corresponded with its transcript levels response Pi availability. Thus, fine-tuning expression may be potent strategy for further increasing crop varieties.

Язык: Английский

Процитировано

32

Transcriptome analysis of the phosphate starvation response sheds light on strigolactone biosynthesis in rice DOI Creative Commons
Imran Haider, Yunmeng Zhang, Fred White

и другие.

The Plant Journal, Год журнала: 2023, Номер 114(2), С. 355 - 370

Опубликована: Фев. 13, 2023

SUMMARY Phosphorus (P) is a major element required for plant growth and development. To cope with P shortage, plants activate local long‐distance signaling pathways, such as an increase in the production exudation of strigolactones (SLs). The role latter mitigating deficiency is, however, still largely unknown. shed light on this, we studied transcriptional response to starvation replenishment wild‐type rice SL mutant, dwarf10 ( d10 ), upon exogenous application synthetic GR24. resulted alterations, upregulation TRANSPORTER , SYG1/PHO81/XPR1 SPX ) VACUOLAR PHOSPHATE EFFLUX . Gene Ontology (GO) analysis genes induced by showed enrichment phospholipid catabolic process phosphatase activity. In enriched sesquiterpenoid production, secondary shoot formation metabolic processes, including lactone biosynthesis. Furthermore, several GR24 treatment shared same GO terms starvation‐induced genes, oxidation reduction, heme binding oxidoreductase activity, hinting at that SLs play reprogramming starvation. co‐expression network uncovered METHYL TRANSFERASE displayed co‐regulation known biosynthetic genes. Functional characterization this gene encodes enzyme catalyzing conversion carlactonoic acid methyl carlactonoate. Our work provides valuable resource further studies crops reveals tool discovery

Язык: Английский

Процитировано

31

A spatially concerted epidermal auxin signaling framework steers the root hair foraging response under low nitrogen DOI Creative Commons
Zhongtao Jia, Ricardo Fabiano Hettwer Giehl, Anja Hartmann

и другие.

Current Biology, Год журнала: 2023, Номер 33(18), С. 3926 - 3941.e5

Опубликована: Сен. 1, 2023

As a major determinant of the nutrient-acquiring root surface, hairs (RHs) provide low-input strategy to enhance nutrient uptake. Although primary and lateral roots exhibit elongation responses under mild nitrogen (N) deficiency, foraging response RHs underlying regulatory mechanisms remain elusive. Employing transcriptomics functional studies revealed framework molecular components composing cascade auxin synthesis, transport, signaling that triggers RH for N acquisition. Through upregulation Tryptophan Aminotransferase Arabidopsis 1 (TAA1) YUCCA8, low increases accumulation in apex. Auxin is then directed differentiation zone via transport machinery, AUXIN TRANSPORTER PROTEIN (AUX1) PIN-FORMED 2 (PIN2). Upon arrival zone, activates transcription factors RESPONSE FACTOR 6 8 (ARF6/8) promote epidermal auxin-inducible transcriptional module ROOT HAIR DEFECTIVE (RHD6)-LOTUS JAPONICA HAIRLESS-LIKE 3 (LRL3) steer N. Our study uncovers spatially defined by RHs, expanding mechanistic hormone-regulated sensing plant roots.

Язык: Английский

Процитировано

31

A CYBDOM protein impacts iron homeostasis and primary root growth under phosphate deficiency in Arabidopsis DOI Creative Commons
Joaquín Clúa, Jonatan Montpetit, Pedro Jiménez‐Sandoval

и другие.

Nature Communications, Год журнала: 2024, Номер 15(1)

Опубликована: Янв. 11, 2024

Arabidopsis primary root growth response to phosphate (Pi) deficiency is mainly controlled by changes in apoplastic iron (Fe). Upon Pi deficiency, Fe deposition the apical meristem activates pathways leading arrest of maintenance and inhibition cell elongation. Here, we report that a member uncharacterized cytochrome b561 DOMON domain (CYBDOM) protein family, named CRR, promotes reduction an ascorbate-dependent manner controls deposition. Under low Pi, crr mutant shows enhanced associated with increased meristematic division. Conversely, CRR overexpression abolishes rendering insensitive Pi. The single hyp1 double mutant, harboring null allele another CYDOM tolerance high-Fe stress upon germination seedling growth. uptake translocation shoot results plants highly sensitive excess. Our identify ferric reductase implicated homeostasis developmental responses abiotic stress, reveal biological role for CYBDOM proteins plants.

Язык: Английский

Процитировано

14

The centrality of redox regulation and sensing of reactive oxygen species in abiotic and biotic stress acclimatization DOI
Ibadete Denjalli, Madita Knieper, Jana Uthoff

и другие.

Journal of Experimental Botany, Год журнала: 2024, Номер 75(15), С. 4494 - 4511

Опубликована: Фев. 6, 2024

During land plant evolution, the number of genes encoding for components thiol redox regulatory network and generator systems reactive oxygen species (ROS) expanded, tentatively indicating that they have a role in tailored environmental acclimatization. This hypothesis has been validated both experimentally theoretically during last few decades. Recent developments dynamic redox-sensitive GFP (roGFP)-based vivo sensors H2O2 potential glutathione pool paved way dissecting kinetics changes occur these crucial parameters response to stressors. The versatile cellular sensory system monitors alterations metabolism controls activity target proteins, thereby affects most, if not all, processes ranging from transcription translation metabolism. review uses examples describe redox- ROS-dependent realising appropriate responses diverse stresses. selected case studies concern different challenges, namely excess excitation energy, heavy metal cadmium metalloid arsenic, nitrogen or phosphate shortages as nutrient deficiency, wounding, nematode infestation. Each challenge redox-regulatory ROS network, but our present state knowledge also points toward pressing questions remain open relation regulation

Язык: Английский

Процитировано

11

Plant PHR Transcription Factors: Put on A Map DOI Open Access
Paweł Sega, Andrzej Pacak

Genes, Год журнала: 2019, Номер 10(12), С. 1018 - 1018

Опубликована: Дек. 6, 2019

The phosphate starvation response (PHR) protein family exhibits the MYB and coiled-coil domains. In plants, within either 5′ untranslated regions (UTRs) or promoter of starvation-induced (PSI) genes are characteristic cis-regulatory elements, namely PHR1 binding sequence (P1BS). most widely studied PHR members, such as AtPHR1 in Arabidopsis thaliana (L.) OsPHR2 Oryza sativa (L.), may activate gene expression a broad range PSI by to elements (Pi) dependent manner. Pi signaling, transcription factors (TFs) can be selectively activated deactivated other proteins execute final step signal transduction. Several new have been associated with AtPHR1/OsPHR2 signaling cascade last few years. While TF transcriptional role has intensively, here we highlight recent findings upstream molecular components pathways that interfere mode action plants. Detailed information about regulation itself its events reviewed.

Язык: Английский

Процитировано

63

The dynamic nature and regulation of the root clock DOI Open Access
Wei Xuan, Hugues De Gernier, Tom Beeckman

и другие.

Development, Год журнала: 2020, Номер 147(3)

Опубликована: Фев. 1, 2020

ABSTRACT Plants explore the soil by continuously expanding their root system, a process that depends on production of lateral roots (LRs). Sites where LRs can be produced are specified in primary axis through pre-patterning mechanism, determined biological clock is coordinated temporal signals and positional cues. This ‘root clock’ generates an oscillatory signal translated into developmental cue to specify set founder cells for LR formation. In this Review, we summarize recent findings shed light mechanisms underlying discuss how periodic contributes conversion primordia. We also provide overview phases may influenced endogenous factors, such as plant hormone auxin, exogenous environmental Finally, additional aspects root-branching act independently clock.

Язык: Английский

Процитировано

60

Lateral root formation and nutrients: nitrogen in the spotlight DOI Open Access

Pierre‐Mathieu Pélissier,

Hans Motte, Tom Beeckman

и другие.

PLANT PHYSIOLOGY, Год журнала: 2021, Номер 187(3), С. 1104 - 1116

Опубликована: Март 23, 2021

Lateral roots are important to forage for nutrients due their ability increase the uptake area of a root system. Hence, it comes as no surprise that lateral formation is affected by or nutrient starvation, and such contributes system plasticity. Understanding molecular mechanisms regulating adaptation dynamics toward availability useful optimize plant use efficiency. There at present profound, though still evolving, knowledge on pathways. Here, we aimed review intersection with signaling pathways give an update regulation development nutrients, particular focus nitrogen. Remarkably, most not clear how controlled. Only nitrogen, one dominant in control formation, crosstalk multiple key signals determining clearly shown. In this update, first general overview current affect followed deeper discussion nitrogen act different root-mediating which recent studies yield insights.

Язык: Английский

Процитировано

52

The phosphate language of fungi DOI Creative Commons

Kabir Bhalla,

Xianya Qu,

Matthias Kretschmer

и другие.

Trends in Microbiology, Год журнала: 2021, Номер 30(4), С. 338 - 349

Опубликована: Авг. 31, 2021

Язык: Английский

Процитировано

43