Frontiers in Plant Science,
Год журнала:
2023,
Номер
14
Опубликована: Апрель 6, 2023
Plants
release
a
large
variety
of
metabolites
via
their
roots
to
shape
physico-chemical
soil
properties
and
biological
processes
in
the
rhizosphere.
While
hydroponic
growth
conditions
facilitate
accessibility
root
system
recovery
exudates,
natural
environment
can
alter
metabolism
exudate
secretion,
raising
question
what
extent
quantity
composition
exudates
released
systems
reflect
those
recovered
from
soil-grown
roots.Using
washing
method,
we
sampled
four
field-grown
cover
crop
species
with
wide
taxonomic
distance,
namely
white
mustard,
lacy
phacelia,
bristle
oat,
Egyptian
clover.
A
set
primary
secondary
were
analysed
targeted
untargeted
LC-MS-based
approach,
respectively,
for
comparison
obtained
hydroponically
cultured
plants.We
found
that
cultivated
plants
larger
amount
total
carbon,
but
carbon
was
not
indicative
diversity
exudates.
In
field,
phacelia
clover
contained
2.4
3.8
times
more
metabolites,
whereas
exudation
hydroponics
5-
4-fold
higher.
The
identified
using
approach
much
distinct
among
all
than
quantified
metabolites.
Among
metabolite
classes,
presence
lipids
lipid-like
molecules
highly
field
samples,
while
phenylpropanoids,
organoheterocyclic
compounds
or
benzenoids
characteristic
clover,
mustard
irrespective
cultivation
condition.
However,
at
compound
level
bulk
specific
every
species,
which
implies
poorly
metabolic
complexity
plants.
The Plant Cell,
Год журнала:
2023,
Номер
36(2), С. 298 - 323
Опубликована: Окт. 17, 2023
Abstract
The
high-yielding
Green
Revolution
varieties
of
cereal
crops
are
characterized
by
a
semidwarf
architecture
and
lodging
resistance.
Plant
height
is
tightly
regulated
the
availability
phosphate
(Pi),
yet
underlying
mechanism
remains
obscure.
Here,
we
report
that
rice
(Oryza
sativa)
R2R3-type
Myeloblastosis
(MYB)
transcription
factor
MYB110
Pi-dependent
negative
regulator
plant
height.
direct
target
PHOSPHATE
STARVATION
RESPONSE
2
(OsPHR2)
regulates
OsPHR2-mediated
inhibition
Inactivation
increased
culm
diameter
bending
resistance,
leading
to
enhanced
resistance
despite
Strikingly,
grain
yield
myb110
mutants
was
elevated
under
both
high-
low-Pi
regimes.
Two
divergent
haplotypes
based
on
single
nucleotide
polymorphisms
in
putative
promoter
corresponded
with
its
transcript
levels
response
Pi
availability.
Thus,
fine-tuning
expression
may
be
potent
strategy
for
further
increasing
crop
varieties.
The Plant Journal,
Год журнала:
2023,
Номер
114(2), С. 355 - 370
Опубликована: Фев. 13, 2023
SUMMARY
Phosphorus
(P)
is
a
major
element
required
for
plant
growth
and
development.
To
cope
with
P
shortage,
plants
activate
local
long‐distance
signaling
pathways,
such
as
an
increase
in
the
production
exudation
of
strigolactones
(SLs).
The
role
latter
mitigating
deficiency
is,
however,
still
largely
unknown.
shed
light
on
this,
we
studied
transcriptional
response
to
starvation
replenishment
wild‐type
rice
SL
mutant,
dwarf10
(
d10
),
upon
exogenous
application
synthetic
GR24.
resulted
alterations,
upregulation
TRANSPORTER
,
SYG1/PHO81/XPR1
SPX
)
VACUOLAR
PHOSPHATE
EFFLUX
.
Gene
Ontology
(GO)
analysis
genes
induced
by
showed
enrichment
phospholipid
catabolic
process
phosphatase
activity.
In
enriched
sesquiterpenoid
production,
secondary
shoot
formation
metabolic
processes,
including
lactone
biosynthesis.
Furthermore,
several
GR24
treatment
shared
same
GO
terms
starvation‐induced
genes,
oxidation
reduction,
heme
binding
oxidoreductase
activity,
hinting
at
that
SLs
play
reprogramming
starvation.
co‐expression
network
uncovered
METHYL
TRANSFERASE
displayed
co‐regulation
known
biosynthetic
genes.
Functional
characterization
this
gene
encodes
enzyme
catalyzing
conversion
carlactonoic
acid
methyl
carlactonoate.
Our
work
provides
valuable
resource
further
studies
crops
reveals
tool
discovery
Current Biology,
Год журнала:
2023,
Номер
33(18), С. 3926 - 3941.e5
Опубликована: Сен. 1, 2023
As
a
major
determinant
of
the
nutrient-acquiring
root
surface,
hairs
(RHs)
provide
low-input
strategy
to
enhance
nutrient
uptake.
Although
primary
and
lateral
roots
exhibit
elongation
responses
under
mild
nitrogen
(N)
deficiency,
foraging
response
RHs
underlying
regulatory
mechanisms
remain
elusive.
Employing
transcriptomics
functional
studies
revealed
framework
molecular
components
composing
cascade
auxin
synthesis,
transport,
signaling
that
triggers
RH
for
N
acquisition.
Through
upregulation
Tryptophan
Aminotransferase
Arabidopsis
1
(TAA1)
YUCCA8,
low
increases
accumulation
in
apex.
Auxin
is
then
directed
differentiation
zone
via
transport
machinery,
AUXIN
TRANSPORTER
PROTEIN
(AUX1)
PIN-FORMED
2
(PIN2).
Upon
arrival
zone,
activates
transcription
factors
RESPONSE
FACTOR
6
8
(ARF6/8)
promote
epidermal
auxin-inducible
transcriptional
module
ROOT
HAIR
DEFECTIVE
(RHD6)-LOTUS
JAPONICA
HAIRLESS-LIKE
3
(LRL3)
steer
N.
Our
study
uncovers
spatially
defined
by
RHs,
expanding
mechanistic
hormone-regulated
sensing
plant
roots.
Nature Communications,
Год журнала:
2024,
Номер
15(1)
Опубликована: Янв. 11, 2024
Arabidopsis
primary
root
growth
response
to
phosphate
(Pi)
deficiency
is
mainly
controlled
by
changes
in
apoplastic
iron
(Fe).
Upon
Pi
deficiency,
Fe
deposition
the
apical
meristem
activates
pathways
leading
arrest
of
maintenance
and
inhibition
cell
elongation.
Here,
we
report
that
a
member
uncharacterized
cytochrome
b561
DOMON
domain
(CYBDOM)
protein
family,
named
CRR,
promotes
reduction
an
ascorbate-dependent
manner
controls
deposition.
Under
low
Pi,
crr
mutant
shows
enhanced
associated
with
increased
meristematic
division.
Conversely,
CRR
overexpression
abolishes
rendering
insensitive
Pi.
The
single
hyp1
double
mutant,
harboring
null
allele
another
CYDOM
tolerance
high-Fe
stress
upon
germination
seedling
growth.
uptake
translocation
shoot
results
plants
highly
sensitive
excess.
Our
identify
ferric
reductase
implicated
homeostasis
developmental
responses
abiotic
stress,
reveal
biological
role
for
CYBDOM
proteins
plants.
Journal of Experimental Botany,
Год журнала:
2024,
Номер
75(15), С. 4494 - 4511
Опубликована: Фев. 6, 2024
During
land
plant
evolution,
the
number
of
genes
encoding
for
components
thiol
redox
regulatory
network
and
generator
systems
reactive
oxygen
species
(ROS)
expanded,
tentatively
indicating
that
they
have
a
role
in
tailored
environmental
acclimatization.
This
hypothesis
has
been
validated
both
experimentally
theoretically
during
last
few
decades.
Recent
developments
dynamic
redox-sensitive
GFP
(roGFP)-based
vivo
sensors
H2O2
potential
glutathione
pool
paved
way
dissecting
kinetics
changes
occur
these
crucial
parameters
response
to
stressors.
The
versatile
cellular
sensory
system
monitors
alterations
metabolism
controls
activity
target
proteins,
thereby
affects
most,
if
not
all,
processes
ranging
from
transcription
translation
metabolism.
review
uses
examples
describe
redox-
ROS-dependent
realising
appropriate
responses
diverse
stresses.
selected
case
studies
concern
different
challenges,
namely
excess
excitation
energy,
heavy
metal
cadmium
metalloid
arsenic,
nitrogen
or
phosphate
shortages
as
nutrient
deficiency,
wounding,
nematode
infestation.
Each
challenge
redox-regulatory
ROS
network,
but
our
present
state
knowledge
also
points
toward
pressing
questions
remain
open
relation
regulation
Genes,
Год журнала:
2019,
Номер
10(12), С. 1018 - 1018
Опубликована: Дек. 6, 2019
The
phosphate
starvation
response
(PHR)
protein
family
exhibits
the
MYB
and
coiled-coil
domains.
In
plants,
within
either
5′
untranslated
regions
(UTRs)
or
promoter
of
starvation-induced
(PSI)
genes
are
characteristic
cis-regulatory
elements,
namely
PHR1
binding
sequence
(P1BS).
most
widely
studied
PHR
members,
such
as
AtPHR1
in
Arabidopsis
thaliana
(L.)
OsPHR2
Oryza
sativa
(L.),
may
activate
gene
expression
a
broad
range
PSI
by
to
elements
(Pi)
dependent
manner.
Pi
signaling,
transcription
factors
(TFs)
can
be
selectively
activated
deactivated
other
proteins
execute
final
step
signal
transduction.
Several
new
have
been
associated
with
AtPHR1/OsPHR2
signaling
cascade
last
few
years.
While
TF
transcriptional
role
has
intensively,
here
we
highlight
recent
findings
upstream
molecular
components
pathways
that
interfere
mode
action
plants.
Detailed
information
about
regulation
itself
its
events
reviewed.
ABSTRACT
Plants
explore
the
soil
by
continuously
expanding
their
root
system,
a
process
that
depends
on
production
of
lateral
roots
(LRs).
Sites
where
LRs
can
be
produced
are
specified
in
primary
axis
through
pre-patterning
mechanism,
determined
biological
clock
is
coordinated
temporal
signals
and
positional
cues.
This
‘root
clock’
generates
an
oscillatory
signal
translated
into
developmental
cue
to
specify
set
founder
cells
for
LR
formation.
In
this
Review,
we
summarize
recent
findings
shed
light
mechanisms
underlying
discuss
how
periodic
contributes
conversion
primordia.
We
also
provide
overview
phases
may
influenced
endogenous
factors,
such
as
plant
hormone
auxin,
exogenous
environmental
Finally,
additional
aspects
root-branching
act
independently
clock.
PLANT PHYSIOLOGY,
Год журнала:
2021,
Номер
187(3), С. 1104 - 1116
Опубликована: Март 23, 2021
Lateral
roots
are
important
to
forage
for
nutrients
due
their
ability
increase
the
uptake
area
of
a
root
system.
Hence,
it
comes
as
no
surprise
that
lateral
formation
is
affected
by
or
nutrient
starvation,
and
such
contributes
system
plasticity.
Understanding
molecular
mechanisms
regulating
adaptation
dynamics
toward
availability
useful
optimize
plant
use
efficiency.
There
at
present
profound,
though
still
evolving,
knowledge
on
pathways.
Here,
we
aimed
review
intersection
with
signaling
pathways
give
an
update
regulation
development
nutrients,
particular
focus
nitrogen.
Remarkably,
most
not
clear
how
controlled.
Only
nitrogen,
one
dominant
in
control
formation,
crosstalk
multiple
key
signals
determining
clearly
shown.
In
this
update,
first
general
overview
current
affect
followed
deeper
discussion
nitrogen
act
different
root-mediating
which
recent
studies
yield
insights.