British Journal of Pharmacology,
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 3, 2024
Conventional
cell
culture
techniques
generally
fail
to
recapitulate
the
expression
profiles
or
functional
phenotypes
of
in
vivo
equivalents
they
are
meant
model.
These
models
indispensable
for
preclinical
drug
discovery
and
mechanistic
studies.
However,
if
our
goal
is
develop
effective
therapies
that
work
as
intended
human
body,
we
must
revise
normal
disease
physiology
ensure
identify
compounds
useful
beyond
vitro
models.
Frontiers in Bioengineering and Biotechnology,
Год журнала:
2025,
Номер
13
Опубликована: Апрель 30, 2025
The
safe-by-design
of
engineered
nanoparticles
(NPs)
for
any
application
requires
a
detailed
understanding
how
the
particles
interact
with
single
cells.
Most
studies
are
based
on
two-dimensional,
uniformly
dense
cell
cultures,
which
do
not
represent
diverse
and
inhomogeneous
environments
found
in
situ.
In-vitro
models
that
accurately
tissue
complexity,
including
realistic
densities,
essential
to
increase
predictive
accuracy
cell-NP
interactions.
This
study
uses
bioprinted
gradient
model
examine
relation
between
density
NP
uptake
one
dish.
A549
lung
epithelial
gradients
within
inserts
were
produced
bioprinter
by
modulating
inter-droplet
distances.
After
two
days
culture,
cells
exposed
Cy5-labeled
silica
NPs
(SiO2
NPs,
∼112
nm,
20
μg/mL)
up
48
h.
Confocal
fluorescence
microscopy
3D
image
analysis
used
quantify
uptake,
surface
area,
volume.
relationship
other
parameters
was
then
investigated
statistically.
Bioprinting
enabled
creation
reproducible
linear
gradients,
allowing
controlled
modeling
variations
while
preserving
viability
throughout
experiment.
Increasing
distances,
from
0.1
mm
0.6
mm,
achieve
decreasing
densities.
SiO2
per
around
50%
higher
low-density
regions
compared
high-density
areas
across
all
time
points,
i.e.,
6,
24,
h
post-exposure.
inverse
correlated
greater
average
area
lower-density
regions,
differences
proliferation
rates
at
varying
densities
did
significantly
impact
uptake.
is
enhanced
lower
mainly
due
increased
available
revealing
potential
interaction
tissues
present
variability.
Our
drop-on-demand
bioprinting
successfully
supports
implementation
in-vitro
their
relevance
as
new
approach
methodologies
(NAMs)
next-generation
risk
assessment
strategies.
Cell Systems,
Год журнала:
2025,
Номер
unknown, С. 101265 - 101265
Опубликована: Май 1, 2025
To
investigate
how
cellular
variations
arise
across
spatiotemporal
scales
in
a
population
of
identical
healthy
cells,
we
performed
data-driven
analysis
nuclear
growth
hiPS
cell
colonies
as
model
system.
We
generated
3D
timelapse
dataset
thousands
nuclei
over
multiple
days
and
developed
open-source
tools
for
image
data
feature-based
exploration.
Together,
these
data,
tools,
workflows
comprise
framework
systematic
quantitative
dynamics
at
individual
levels,
the
further
highlights
important
aspects
to
consider
when
interpreting
data.
found
that
volume
trajectories
from
short-timescale
attributable
their
context
within
colony.
identified
time-invariant
compensation
relationship
between
duration
starting
population.
Notably,
discovered
inheritance
plays
crucial
role
determining
two
key
features
while
other
are
determined
by
not
inherited.
Molecular Biology of the Cell,
Год журнала:
2023,
Номер
34(4)
Опубликована: Янв. 25, 2023
The
function
of
an
epithelial
tissue
is
intertwined
with
its
architecture.
Epithelial
tissues
are
often
described
as
pseudo-two-dimensional,
but
this
view
may
be
partly
attributed
to
experimental
bias:
many
model
epithelia,
including
cultured
cell
lines,
easiest
image
from
the
"top-down."
We
measured
three-dimensional
architecture
cells
in
culture
and
found
that
it
varies
dramatically
across
regions,
presenting
a
challenge
for
reproducibility
cross-study
comparisons.
therefore
developed
novel
tool
(Automated
Layer
Analysis,
"ALAn")
characterize
unbiased
manner.
Using
ALAn,
we
find
can
organize
into
four
distinct
architectures
correlates
density.
Cells
exhibit
biological
properties
each
Organization
apical-basal
axis
determined
early
monolayer
development
by
substrate
availability,
while
disorganization
arises
inability
form
connections.
Our
work
highlights
need
carefully
control
when
using
system
biology
introduces
tool,
built
on
set
rules
widely
applied
culture.
Annual Review of Biophysics,
Год журнала:
2024,
Номер
53(1), С. 299 - 317
Опубликована: Март 1, 2024
The
volumes
of
living
cells
undergo
dynamic
changes
to
maintain
the
cells'
structural
and
functional
integrity
in
many
physiological
processes.
Minor
fluctuations
cell
volume
can
serve
as
intrinsic
signals
that
play
a
crucial
role
fate
determination
during
mechanotransduction.
In
this
review,
we
discuss
variability
its
vivo,
along
with
an
overview
mechanisms
governing
regulation.
Additionally,
provide
insights
into
current
approaches
used
control
vitro.
Furthermore,
summarize
biological
implications
regulation
recent
advances
understanding
fundamental
relationship
between
Finally,
delve
potential
underlying
mechanisms,
including
intracellular
macromolecular
crowding
cellular
mechanics,
govern
global
response
volume.
By
exploring
intricate
interplay
mechanotransduction,
underscore
importance
considering
signaling
cue
unravel
basic
principles
propose
future
research
directions
extend
our
Overall,
review
highlights
significance
signal
mechanotransduction
points
out
possibility
controlling
fate,
mitigate
disease-related
damage,
facilitate
healing
damaged
tissues.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Сен. 6, 2024
Morphogenesis
of
developing
tissues
results
from
anisotropic
growth,
typically
driven
by
polarized
patterns
gene
expression.
Here
we
propose
an
alternative
model
growth
self-organized
feedback
between
cell
polarity,
mechanical
pressure,
and
division
rates.
Specifically,
polarity
alignment
can
induce
spontaneous
symmetry
breaking
in
proliferation,
resulting
the
distribution
pressure
tissue.
We
show
that
proliferation
anisotropy
be
controlled
cellular
elasticity,
motility
contact
inhibition,
thereby
elucidating
design
principles
for
morphogenesis.
Multicellular
systems,
such
as
epithelial
cell
collectives,
undergo
transitions
similar
to
those
in
inert
physical
systems
like
sand
piles
and
foams.
To
remodel
or
maintain
tissue
organization
during
development
disease,
these
collectives
transition
between
fluid-like
solid-like
states,
undergoing
jamming
unjamming
transitions.
While
share
principles
with
understanding
their
regulation
implications
biology
is
challenging.
Although
follow
physics
described
by
the
diagram,
they
are
fundamentally
biological
processes.
In
this
review,
we
explore
how
cellular
processes
interactions
regulate
We
begin
an
overview
of
control
remodeling
model
describe
recent
findings
governing
solidification
fluidization.
then
mechanistic
pathways
that
modulate
phase
diagram
axes,
focusing
on
fluctuations
geometric
compatibility.
Drawing
upon
seminal
works
biology,
discuss
roles
cytoskeleton
cell-cell
adhesion
controlling
motility
geometry.
This
comprehensive
view
illustrates
molecular
unjamming,
crucial
for
various
contexts.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Ноя. 3, 2023
Mechanical
forces
have
been
shown
to
influence
cellular
decisions
grow,
die,
or
differentiate,
through
largely
mysterious
mechanisms.
Separately,
changes
in
resting
membrane
potential
observed
development,
differentiation,
regeneration,
and
cancer.
We
now
demonstrate
that
is
the
central
mediator
of
response
mechanical
pressure.
show
acting
on
cell
change
biomass
density,
which
turn
alters
potential.
Membrane
then
regulates
number
density
epithelia
by
controlling
growth,
proliferation,
elimination.
Mechanistically,
we
control
signaling
Hippo
MAPK
pathways,
potentially
other
pathways
originate
at
membrane.
While
many
molecular
interactions
are
known
affect
signaling,
upstream
signal
activates
canonical
pathway
has
previously
elusive.
Our
results
establish
as
a
regulator
growth
tissue
homeostasis.
Contact
inhibition
(CI)
represents
a
crucial
tumor-suppressive
mechanism
responsible
for
controlling
the
unbridled
growth
of
cells,
thus
preventing
formation
cancerous
tissues.
CI
can
be
further
categorized
into
two
distinct
yet
interrelated
components:
locomotion
(CIL)
and
proliferation
(CIP).
These
components
have
historically
been
viewed
as
separate
processes,
but
emerging
research
indicates
that
they
share
both
distinctive
common
pathways.
Moreover,
exhibit
intriguing
intersections
with
mechanotransduction,
process
involves
cells
sensing
responding
to
mechanical
forces.
This
review
article
describes
intricate
interplay
between
forces
CI,
shedding
light
on
how
these
regulate
CIL
CIP.
Emphasis
is
placed
filamin
A
(FLNA)-mediated
elucidating
FLNA
senses
translates
them
biochemical
signals
cell
proliferation.
In
addition
FLNA,
trans-acting
factors
(TAFs)
emerge
sensitive
players
in
mechanotransduction
process.
presents
methods
identifying
TAFs
profiling
associated
changes
chromatin
structure,
offering
valuable
insights
regulation.
Finally,
it
addresses
unanswered
questions
fields
delineates
their
possible
future
directions.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Апрель 15, 2024
Abstract
Accurate
positioning
of
the
mitotic
spindle
within
rounded
cell
body
is
critical
to
physiological
maintenance.
Adherent
cells
encounter
confinement
from
neighboring
or
extracellular
matrix
(ECM),
which
can
cause
rotation
spindles
and,
consequently,
titling
metaphase
plate
(MP).
To
understand
and
orientation
under
by
fibers
(ECM-confinement),
we
use
flexible
ECM-mimicking
nanofibers
that
allow
natural
rounding
while
confining
it
differing
levels.
Rounded
bodies
are
anchored
in
place
actin
retraction
(RFs)
originating
adhesion
clusters
on
fibers.
We
discover
extent
ECM-confinement
patterns
RFs
3D:
triangular
band-like
at
low
high
confinement,
respectively.
A
stochastic
Monte-Carlo
simulation
centrosome
(CS),
chromosome
(CH),
membrane
interactions,
3D
arrangement
recovers
MP
tilting
trends
observed
experimentally.
Our
mechanistic
analysis
reveals
shape
primary
driver
rotation.
Under
ECM-confinement,
mechanically
pinch
cortex,
causing
have
localized
deformations
contact
sites
with
Interestingly,
leads
tilts,
mechanistically
depend
upon
cortical
deformation,
RF
patterning,
position.
identify
deformation
work
tandem
limit
tilt,
asymmetric
tilts.
Overall,
provide
fundamental
insights
into
how
mitosis
may
proceed
fibrous
ECM-confining
microenvironments
vivo.