Intermittent fasting attenuates CNS inflammaging - rebalancing the transposonome DOI Creative Commons
Mitchell J Cummins, Ethan T Cresswell, Doug W. Smith

и другие.

Research Square (Research Square), Год журнала: 2025, Номер unknown

Опубликована: Март 12, 2025

Abstract A hallmark of CNS aging is sterile, chronic, low-grade neuroinflammation. Understanding how the develops chronic inflammation necessary to achieve extended healthspan. Characterisation neuroinflammatory molecular triggers remains limited. Interventions that reduce neuroinflammation and extend health lifespan could be useful in this regard. One such intervention intermittent fasting (IF), but IF impacts insufficiently understood. To address this, we performed deep RNA-sequencing on young, middle-aged, old, mouse regions. Additionally, sequenced spinal cord animals subject adult lifelong IF. We found most differentially expressed genes (DEGs) at middle age were region specific (~ 50–84%), whilst effect weakened 18–72%) old age, suggesting emergence a more general global profile. DEGs from all regions enriched for inflammatory immune ontologies. Surprisingly, SC was aging- neuroinflammation-impacted both ages, with by far highest number DEGs, largest net increase expression transposable elements (TEs), greatest enrichment immune-related ontologies, generally larger increases gene expression. Overall, normal upregulation sensors non-self, DNA/RNA, activation inflammasomes, cGAS-STING1 interferon response genes, across CNS. Whilst still developed an profile SC, average lower ~ 50% compared age-matched controls. IF-specific apparent, also acts separate, potentially targetable, pathways those impacted aging. Expression disease associated microglia, phagocytic exhaustion, STING1, inflammasome decreased Significantly, TE reversed decrease. In summary, find hotspot, attenuates neuroinflammaging rebalancing transposonome.

Язык: Английский

Genetics of human telomere biology disorders DOI
Patrick Revy, Caroline Kannengiesser, Alison A. Bertuch

и другие.

Nature Reviews Genetics, Год журнала: 2022, Номер 24(2), С. 86 - 108

Опубликована: Сен. 23, 2022

Язык: Английский

Процитировано

131

Activation of human endogenous retroviruses and its physiological consequences DOI
Nicholas Dopkins, Douglas F. Nixon

Nature Reviews Molecular Cell Biology, Год журнала: 2023, Номер 25(3), С. 212 - 222

Опубликована: Окт. 23, 2023

Язык: Английский

Процитировано

57

Transposon–host arms race: a saga of genome evolution DOI
Yuka W. Iwasaki, Keisuke Shoji,

Shinichi Nakagwa

и другие.

Trends in Genetics, Год журнала: 2025, Номер unknown

Опубликована: Фев. 1, 2025

Язык: Английский

Процитировано

2

The sound of silence: mechanisms and implications of HUSH complex function DOI Creative Commons
Marta Seczyńska, Paul J. Lehner

Trends in Genetics, Год журнала: 2023, Номер 39(4), С. 251 - 267

Опубликована: Фев. 6, 2023

The vertebrate genome is under constant threat of invasion by genetic parasites. Whether the host can immediately recognize and respond to invading elements has been unclear. discovery human silencing hub (HUSH) complex, finding that it provides immediate protection from products reverse transcription, have important implications for mammalian evolution. In this review, we summarize recent insights into HUSH function describe how cellular introns provide a novel means self–nonself discrimination, allowing transcriptionally repress broad range intronless elements. We discuss contributes evolution, highlight studies reporting critical role in development implicating control immune signaling cancer progression.

Язык: Английский

Процитировано

39

ARS2 instructs early transcription termination-coupled RNA decay by recruiting ZC3H4 to nascent transcripts DOI Creative Commons
Jérôme O. Rouvière, Anna Salerno-Kochan, Søren Lykke‐Andersen

и другие.

Molecular Cell, Год журнала: 2023, Номер 83(13), С. 2240 - 2257.e6

Опубликована: Июнь 16, 2023

Язык: Английский

Процитировано

32

Co-transcriptional genome surveillance by HUSH is coupled to termination machinery DOI Creative Commons
Andrew Spencley,

Shiran Bar,

Tomek Swigut

и другие.

Molecular Cell, Год журнала: 2023, Номер 83(10), С. 1623 - 1639.e8

Опубликована: Май 1, 2023

The HUSH complex recognizes and silences foreign DNA such as viruses, transposons, transgenes without prior exposure to its targets. Here, we show that endogenous targets of the fall into two distinct classes based on presence or absence H3K9me3. These are further distinguished by their transposon content differential response loss HUSH. A de novo genomic rearrangement at Sox2 locus induces a switch from H3K9me3-independent H3K9me3-associated targeting, resulting in silencing. We demonstrate interacts with termination factor WDR82 and—via component MPP8—with nascent RNA. accumulates sites high RNAPII occupancy including long exons transcription manner dependent CPSF. Together, our results uncover functional diversity this vertebrate-specific exploits evolutionarily ancient machinery for co-transcriptional chromatin targeting genome surveillance.

Язык: Английский

Процитировано

30

Diverse heterochromatin states restricting cell identity and reprogramming DOI Creative Commons
Ryan L. McCarthy, Jingchao Zhang, Kenneth S. Zaret

и другие.

Trends in Biochemical Sciences, Год журнала: 2023, Номер 48(6), С. 513 - 526

Опубликована: Март 27, 2023

Язык: Английский

Процитировано

24

The homeobox transcription factor DUXBL controls exit from totipotency DOI
María Vega-Sendino, Felipe F. Lüttmann,

Teresa Olbrich

и другие.

Nature Genetics, Год журнала: 2024, Номер 56(4), С. 697 - 709

Опубликована: Март 20, 2024

Язык: Английский

Процитировано

15

Nuclear mRNA decay: regulatory networks that control gene expression DOI
Xavier Rambout, Lynne E. Maquat

Nature Reviews Genetics, Год журнала: 2024, Номер unknown

Опубликована: Апрель 18, 2024

Язык: Английский

Процитировано

13

Keep quiet: the HUSH complex in transcriptional silencing and disease DOI
Iris Müller, Kristian Helin

Nature Structural & Molecular Biology, Год журнала: 2024, Номер 31(1), С. 11 - 22

Опубликована: Янв. 1, 2024

Язык: Английский

Процитировано

11