conn2res: A toolbox for connectome-based reservoir computing DOI Creative Commons
Laura E. Suárez, Ágoston Mihalik, Filip Milisav

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2023, Номер unknown

Опубликована: Июнь 4, 2023

The connection patterns of neural circuits form a complex network. How signaling in these manifests as cognition and adaptive behaviour remains the central question neuroscience. Concomitant advances connectomics artificial intelligence open fundamentally new opportunities to understand how shape computational capacity biological brain networks. Reservoir computing is versatile paradigm that uses nonlinear dynamics high-dimensional dynamical systems perform computations approximate cognitive functions. Here we present conn2res : an open-source Python toolbox for implementing networks modular, allowing arbitrary architectures be imposed. allows researchers input connectomes reconstructed using multiple techniques, from tract tracing noninvasive diffusion imaging, impose systems, simple spiking neurons memristive dynamics. versatility us ask questions at confluence neuroscience intelligence. By reconceptualizing function computation, sets stage more mechanistic understanding structure-function relationships

Язык: Английский

Competitive interactions shape brain dynamics and computation across species DOI Creative Commons
Andrea I. Luppi, Yonatan Sanz Perl, Jakub Vohryzek

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Окт. 22, 2024

Adaptive cognition relies on cooperation across anatomically distributed brain circuits. However, specialised neural systems are also in constant competition for limited processing resources. How does the brain's network architecture enable it to balance these cooperative and competitive tendencies? Here we use computational whole-brain modelling examine dynamical relevance of interactions mammalian connectome. Across human, macaque, mouse show that models most faithfully reproduce activity, consistently combines modular with diffuse, long-range interactions. The model outperforms cooperative-only model, excellent fit both spatial properties living brain, which were not explicitly optimised but rather emerge spontaneously. Competitive effective connectivity produce greater levels synergistic information local-global hierarchy, lead superior capacity when used neuromorphic computing. Altogether, this work provides a mechanistic link between architecture, properties, computation brain.

Язык: Английский

Процитировано

1

Emergent behavior and neural dynamics in artificial agents tracking turbulent plumes DOI Open Access
Satpreet H. Singh,

Floris van Breuge,

Rajesh P. N. Rao

и другие.

Опубликована: Март 14, 2022

Tracking a turbulent plume to locate its source under variable wind and statistics is complex task; flying insects routinely accomplish such tracking, often over long distances, in pursuit of food or mates. Several aspects this remarkable behavior underlying neural circuitry have been studied experimentally. Here, we take complementary silico approach develop an integrated understanding computations. Specifically, train artificial recurrent network (RNN) agents using deep reinforcement learning (DRL) the simulated plumes. Interestingly, agents' emergent behaviors resemble those insects, RNNs learn compute task-relevant variables with distinct dynamic structures population activity. Our analyses put forward testable behavioral hypothesis for tracking plumes changing direction, provide key intuitions memory requirements dynamics tracking.

Язык: Английский

Процитировано

5

Neural Networks special issue on Artificial Intelligence and Brain Science DOI Creative Commons
Kenji Doya, Karl Friston, Masashi Sugiyama

и другие.

Neural Networks, Год журнала: 2022, Номер 155, С. 328 - 329

Опубликована: Авг. 27, 2022

Язык: Английский

Процитировано

5

DNA Reaction Network Mimicking the Basic Steps of Synaptic Communication DOI
Minghao Hu, Yuqiang Hu,

Wenqian Yuan

и другие.

Chinese Journal of Chemistry, Год журнала: 2023, Номер 41(11), С. 1313 - 1318

Опубликована: Фев. 16, 2023

Comprehensive Summary Biological systems use intricate networks of chemical reactions to exchange information. How simulate complex with simple strand‐displacement is crucial broaden the application scenario DNA reaction network. Here, we report artificial network mimic operation and function biological information transfer via reaction. used as analogs schematize structures transmit Using synapses in neural an example, show that proposed enables core functions systems, such long‐term potential synapses, which underpin learning memory. Also, performed “silicon mimetic” link electronic circuits network‐based structures. As such, synaptic communication simulated by provides a complete demonstration for designing based on essence interaction.

Язык: Английский

Процитировано

2

conn2res: A toolbox for connectome-based reservoir computing DOI Creative Commons
Laura E. Suárez, Ágoston Mihalik, Filip Milisav

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2023, Номер unknown

Опубликована: Июнь 4, 2023

The connection patterns of neural circuits form a complex network. How signaling in these manifests as cognition and adaptive behaviour remains the central question neuroscience. Concomitant advances connectomics artificial intelligence open fundamentally new opportunities to understand how shape computational capacity biological brain networks. Reservoir computing is versatile paradigm that uses nonlinear dynamics high-dimensional dynamical systems perform computations approximate cognitive functions. Here we present conn2res : an open-source Python toolbox for implementing networks modular, allowing arbitrary architectures be imposed. allows researchers input connectomes reconstructed using multiple techniques, from tract tracing noninvasive diffusion imaging, impose systems, simple spiking neurons memristive dynamics. versatility us ask questions at confluence neuroscience intelligence. By reconceptualizing function computation, sets stage more mechanistic understanding structure-function relationships

Язык: Английский

Процитировано

2