Exploring the Evolutionary History and Phylogenetic Relationships of Giant Reed (Arundo donax) through Comprehensive Analysis of Its Chloroplast Genome DOI Open Access
Lin Luo,

Qi Qu,

Hui Lin

и другие.

International Journal of Molecular Sciences, Год журнала: 2024, Номер 25(14), С. 7936 - 7936

Опубликована: Июль 20, 2024

Giant reed (

Язык: Английский

MaGA20ox2f, an OsSD1 homolog, regulates flowering time and fruit yield in banana DOI
Wei Zhao, Xiaoxuan Sun,

Shaoping Wu

и другие.

Molecular Breeding, Год журнала: 2025, Номер 45(1)

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

2

The current view on heavy metal remediation: The relevance of the plant interaction with arbuscular mycorrhizal fungi DOI Creative Commons
Ioana Crișan, Raffaella Balestrini, Chiara Pagliarani

и другие.

Plant Stress, Год журнала: 2024, Номер 12, С. 100439 - 100439

Опубликована: Март 14, 2024

In the last years, heavy metal (HM) pollution has spread across natural and anthropic ecosystems posing inevitable, serious health risks. Commitments to resolve this issue resulted in tightening regulations calls action. The use of plants their symbionts for remediation enjoys support. Nonetheless, keystones between mycorrhizal research application have still be identified. aim work was provide an updated outlook on current HM contexts, with particular focus relevance arbuscular (AM) symbiosis as part plant-soil system. AM potential implication enhancing plant survival performance presence stress could translate into efficient mitigation environmental risks associated increasing contamination human-managed ecosystems. Dust lift-up leaching HMs are main routes exposure pollution. system can reduce these Moreover, growing HM-contaminated lands display chlorosis common toxicity symptom. Therefore, changes occurring chlorophyll content and/or chlorophyll-associated parameters used indicators revealing physiological phytoremediation contexts. Available scientific information suggests that inoculation fungi (AMF) increases levels most cases. Such response likely occurs burden is sustained by symbiotic partners together, so each partner a role mitigating negative effects. Contaminated agricultural land urban come challenges. Feasibility decontaminating them strictly relies achievement long-term desired outcomes. Hence, perennial energy crops establish successful represent best candidate species further approaches.

Язык: Английский

Процитировано

8

Regulation of chloroplast biogenesis, development, and signaling by endogenous and exogenous cues DOI
Kalyan Mahapatra, Arpan Mukherjee,

Shikha Suyal

и другие.

Physiology and Molecular Biology of Plants, Год журнала: 2024, Номер 30(2), С. 167 - 183

Опубликована: Фев. 1, 2024

Язык: Английский

Процитировано

5

Initiation of Translation in Bacteria and Chloroplasts DOI Creative Commons
Michael Webster

Journal of Molecular Biology, Год журнала: 2025, Номер unknown, С. 169137 - 169137

Опубликована: Апрель 1, 2025

Relative rates of protein synthesis in bacteria generally depend on the number copies a messenger RNA (mRNA) and efficiency their loading with ribosomes. Translation initiation involves multi-stage assembly ribosome mRNA to begin synthesis. In bacteria, small ribosomal subunit (30S) form complex that can be supported by RNA-protein RNA-RNA interactions is extensively modulated folding. The initiator transfer (tRNA) large (50S) are recruited aid three factors (IFs). Equivalent translation processes occur chloroplasts due endosymbiotic origin from photosynthetic bacteria. This review first summarizes molecular basis highlighting recent insight into initial, intermediate late stages pathway obtained structural analyses. chloroplast then reviewed, integrating our mechanistic understanding bacterial gene expression detailed vitro experiments data derived primarily genetic studies.

Язык: Английский

Процитировано

0

Characterization of the chloroplast genome of Gleditsia species and comparative analysis DOI Creative Commons
Feng Xiao, Yang Zhao, Xiurong Wang

и другие.

Scientific Reports, Год журнала: 2024, Номер 14(1)

Опубликована: Фев. 21, 2024

The genus Gleditsia has significant medicinal and economic value, but information about the chloroplast genomic characteristics of species been limited. Using Illumina sequencing, we assembled annotated whole genomes seven (Gleditsia sinensis, japonica var. delavayi (G. delavayi), G. fera, japonica, microphylla, Fructus Gleditsiae Abnormalis (Zhū Yá Zào), microphylla mutant). revealed that have a typical circular tetrad structure, with genome sizes ranging from 162,746 to 170,907 bp. Comparative analysis showed most (65.8-75.8%) abundant simple sequence repeats in Gymnocladus were located large single copy region. prefer T/A-ending codons avoid C/G-ending codons, positive selection was acting on rpoA, rpl20, atpB, ndhA ycf4 genes, genes underwent purifying selection. Expansion contraction inverted repeat (IR)/single (SC) region similar patterns within genus. Polymorphism coding regions more conserved than non-coding regions, IR SC Mutational hotspots mostly found intergenic such as "rps16-trnQ", "trnT-trnL", "ndhG-ndhI", "rpl32-trnL" Gleditsia. Phylogenetic fera is closely related sinensis,G. are relatively related. Zhū Zào can be considered bud mutation sinensis. albino phenotype mutant not caused by variations genome, occurrence may due mutations chloroplast-related involved splicing or localization functions. This study will help us enhance our exploration genetic evolution geographical origins

Язык: Английский

Процитировано

4

Chloroplast ATP synthase: From structure to engineering DOI
Thilo Rühle, Dario Leister, Viviana Pasch

и другие.

The Plant Cell, Год журнала: 2024, Номер 36(10), С. 3974 - 3996

Опубликована: Март 14, 2024

F-type ATP synthases are extensively researched protein complexes because of their widespread and central role in energy metabolism. Progress structural biology, proteomics, molecular biology has also greatly advanced our understanding the catalytic mechanism, post-translational modifications, biogenesis chloroplast synthases. Given critical light-driven generation, tailoring activity modeling approaches can be applied to modulate photosynthesis. In future, advances genetic manipulation design tools will significantly expand scope for testing new strategies engineering nanomotors.

Язык: Английский

Процитировано

4

Molecular marker development and phylogenetic analysis of Aconitum species based on chloroplast genomes DOI
Gang Wang, Ying Ren, Yuying Su

и другие.

Industrial Crops and Products, Год журнала: 2024, Номер 221, С. 119386 - 119386

Опубликована: Авг. 7, 2024

Язык: Английский

Процитировано

4

RAS, a Pentatricopeptide Repeat Protein, Interacts with OsTRX z to Regulate Chloroplast Gene Transcription and RNA Processing DOI Creative Commons
Zhennan Qiu,

Shiyong Wen,

Peinan Sun

и другие.

Plants, Год журнала: 2025, Номер 14(2), С. 247 - 247

Опубликована: Янв. 16, 2025

Thioredoxin z (TRX z) plays a significant role in chloroplast development by regulating the transcription of genes. In this study, we identified pentatricopeptide repeat (PPR) protein, rice albino seedling-lethal (RAS), that interacts with OsTRX z. This interaction was initially discovered using yeast two-hybrid (Y2H) screening technique and further validated through Y2H bimolecular fluorescence complementation (BiFC) experiments. RAS contains 16 PPR motifs features small MutS-related (SMR) domain at its C-terminus. CRISPR/Cas9-generated ras mutants exhibited an phenotype characterized abnormal structures significantly reduced chlorophyll content. localizes to is predominantly expressed young leaves. Mutations affect RNA editing rpl2, rps14, ndhA sites, as well splicing atpF, transcripts within chloroplast. Furthermore, expression levels genes associated formation are altered mutant. Both were found interact signal recognition particle (cpSRP) proteins, indicating their proper localization may be dependent on SRP pathway. Collectively, our findings highlight critical development, it involved processing regulation gene expression.

Язык: Английский

Процитировано

0

Exploring the Complete Chloroplast Genomes of Key Lamiaceae Species Uncovers the Secrets of Evolutionary Dynamics and Phylogenetic Relationships DOI Creative Commons
Mehmet Alp Furan, Faruk Yıldız, Özkan Kaya

и другие.

Journal of Plant Growth Regulation, Год журнала: 2025, Номер unknown

Опубликована: Фев. 20, 2025

Язык: Английский

Процитировано

0

Practical Applications of Minichromosomes in Modern Agriculture for Better Crops DOI
Muhammad Naeem Sattar,

Sallah A. Al Hashedi,

Muhammad Munir

и другие.

Опубликована: Янв. 1, 2025

Язык: Английский

Процитировано

0