EVATOM: an optical, label-free, machine learning assisted embryo health assessment tool DOI Creative Commons
Neha Goswami,

Nicola Winston,

Won‐Ho Choi

и другие.

Communications Biology, Год журнала: 2024, Номер 7(1)

Опубликована: Март 5, 2024

Abstract The combination of a good quality embryo and proper maternal health factors promise higher chances successful in vitro fertilization (IVF) procedure leading to clinical pregnancy live birth. Of these two factors, selection is controllable aspect. current gold standard practice visual assessment an based on its morphological appearance by trained embryologists. More recently, machine learning has been incorporated into “packages”. Here, we report EVATOM: machine-learning assisted tool utilizing optical quantitative phase imaging technique called artificial confocal microscopy (ACM). We present label-free nucleus detection method with, the best our knowledge, novel biomarkers. Two viability models are presented for grading embryos classes: healthy/intermediate (H/I) or sick (S) class. achieve weighted F1 score 1.0 0.99 respectively in-distribution test set 72 fixed 0.9 0.95 out-of-distribution dataset 19 time-instances from 8 embryos.

Язык: Английский

Drug screening at single-organoid resolution via bioprinting and interferometry DOI Creative Commons
Peyton Tebon, Bowen Wang, Alexander L. Markowitz

и другие.

Nature Communications, Год журнала: 2023, Номер 14(1)

Опубликована: Июнь 6, 2023

Abstract High throughput drug screening is an established approach to investigate tumor biology and identify therapeutic leads. Traditional platforms use two-dimensional cultures which do not accurately reflect the of human tumors. More clinically relevant model systems such as three-dimensional organoids can be difficult scale screen. Manually seeded coupled destructive endpoint assays allow for characterization treatment response, but capture transitory changes intra-sample heterogeneity underlying observed resistance therapy. We present a pipeline generate bioprinted linked label-free, time-resolved imaging via high-speed live cell interferometry (HSLCI) machine learning-based quantitation individual organoids. Bioprinting cells gives rise 3D structures with unaltered histology gene expression profiles. HSLCI in tandem segmentation classification tools enables accurate, label-free parallel mass measurements thousands demonstrate that this strategy identifies transiently or persistently sensitive resistant specific therapies, information could used guide rapid therapy selection.

Язык: Английский

Процитировано

68

Quantitative phase imaging based on holography: trends and new perspectives DOI Creative Commons

Zhengzhong Huang,

Liangcai Cao

Light Science & Applications, Год журнала: 2024, Номер 13(1)

Опубликована: Июнь 27, 2024

Abstract In 1948, Dennis Gabor proposed the concept of holography, providing a pioneering solution to quantitative description optical wavefront. After 75 years development, holographic imaging has become powerful tool for wavefront measurement and phase imaging. The emergence this technology given fresh energy physics, biology, materials science. Digital holography (DH) possesses advantages wide-field, non-contact, precise, dynamic capability complex-waves. DH unique capabilities propagation fields by measuring light scattering with information. It offers visualization refractive index thickness distribution weak absorption samples, which plays vital role in pathophysiology various diseases characterization materials. provides possibility bridge gap between disciplines. is described complex amplitude. complex-value complex-domain reconstructed from intensity-value camera real-domain. Here, we regard process recording reconstruction as transformation real-domain, discuss mathematics physical principles reconstruction. We review underlying principles, technical approaches, breadth applications. conclude emerging challenges opportunities based on combining other methodologies that expand scope utility even further. multidisciplinary nature brings application experts together label-free cell analytical chemistry, clinical sciences, sensing, semiconductor production.

Язык: Английский

Процитировано

38

Imagining the future of optical microscopy: everything, everywhere, all at once DOI Creative Commons
Harikrushnan Balasubramanian, Chad M. Hobson, Teng‐Leong Chew

и другие.

Communications Biology, Год журнала: 2023, Номер 6(1)

Опубликована: Окт. 28, 2023

The optical microscope has revolutionized biology since at least the 17

Язык: Английский

Процитировано

37

Digital in-line holographic microscopy for label-free identification and tracking of biological cells DOI Creative Commons
Jihwan Kim, Sang Joon Lee

Military Medical Research, Год журнала: 2024, Номер 11(1)

Опубликована: Июнь 13, 2024

Abstract Digital in-line holographic microscopy (DIHM) is a non-invasive, real-time, label-free technique that captures three-dimensional (3D) positional, orientational, and morphological information from digital images of living biological cells. Unlike conventional microscopies, the DIHM enables precise measurements dynamic behaviors exhibited by cells within 3D volume. This review outlines fundamental principles comprehensive image processing procedures employed in DIHM-based cell tracking methods. In addition, recent applications for identification various motile cells, including human blood spermatozoa, diseased unicellular microorganisms, are thoroughly examined. Leveraging artificial intelligence has significantly enhanced both speed accuracy identification. The quantitative data on morphology dynamics captured can effectively elucidate underlying mechanisms governing microbial contribute to accumulation diagnostic databases development clinical treatments.

Язык: Английский

Процитировано

11

Quantitative phase microscopies: accuracy comparison DOI Creative Commons
Patrick C. Chaumet, Pierre Bon,

Guillaume Maire

и другие.

Light Science & Applications, Год журнала: 2024, Номер 13(1)

Опубликована: Окт. 11, 2024

Abstract Quantitative phase microscopies (QPMs) play a pivotal role in bio-imaging, offering unique insights that complement fluorescence imaging. They provide essential data on mass distribution and transport, inaccessible to techniques. Additionally, QPMs are label-free, eliminating concerns of photobleaching phototoxicity. However, navigating through the array available QPM techniques can be complex, making it challenging select most suitable one for particular application. This tutorial review presents thorough comparison main techniques, focusing their accuracy terms measurement precision trueness. We focus 8 namely digital holographic microscopy (DHM), cross-grating wavefront (CGM), which is based QLSI (quadriwave lateral shearing interferometry), diffraction (DPM), differential phase-contrast (DPC) microscopy, phase-shifting interferometry (PSI) imaging, Fourier (FPM), spatial light interference (SLIM), transport-of-intensity equation (TIE) For this purpose, we used home-made numerical toolbox discrete dipole approximation (IF-DDA). designed compute electromagnetic field at sample plane microscope, irrespective object’s complexity or illumination conditions. upgraded enable model any type QPM, take into account shot noise. In nutshell, results show DHM PSI inherently free from artefacts rather suffer coherent noise; CGM, DPC, DPM TIE, there trade-off between trueness, balanced by varying experimental parameter; FPM SLIM inherent cannot discarded experimentally cases, not quantitative especially large objects covering part view, such as eukaryotic cells.

Язык: Английский

Процитировано

11

Single-protein optical holography DOI Creative Commons
Jan Christoph Thiele, Emanuel Pfitzner, Philipp Kukura

и другие.

Nature Photonics, Год журнала: 2024, Номер 18(4), С. 388 - 395

Опубликована: Март 13, 2024

Abstract Light scattering by nanoscale objects is a fundamental physical property defined their cross-section and thus polarizability. Over the past decade, number of studies have demonstrated single-molecule sensitivity imaging interference between from object interest reference field. This approach has enabled mass measurement single biomolecules in solution owing to linear scaling image contrast with molecular Nevertheless, all implementations so far are based on common-path interferometer cannot separate independently tune scattered light fields, thereby prohibiting access rich toolbox available holographic imaging. Here we demonstrate comparable using non-common-path geometry dark-field microscope, similar Mach–Zehnder interferometer. We into four parallel, inherently phase-stable detection channels, delivering five orders magnitude boost terms over state-of-the-art methods. detection, resolution proteins below 100 kDa. Separate amplitude phase measurements also yield direct information sample identity experimental determination polarizability biomolecules.

Язык: Английский

Процитировано

10

Polyelectrolyte-multivalent molecule complexes: physicochemical properties and applications DOI
Santiago E. Herrera, Maximiliano L. Agazzi,

Eugenia Apuzzo

и другие.

Soft Matter, Год журнала: 2023, Номер 19(11), С. 2013 - 2041

Опубликована: Янв. 1, 2023

The complexation of polyelectrolytes with other oppositely charged structures gives rise to a great variety functional materials potential applications in wide spectrum technological fields. Depending on the assembly conditions, polyelectrolyte complexes can acquire different macroscopic configurations such as dense precipitates, nanosized colloids and liquid coacervates. In past 50 years, much progress has been achieved understand principles behind phase separation induced by interaction two aqueous solutions, especially for symmetric systems (systems which both polyions have similar molecular weight concentration). However, recent alternative building blocks small molecules (multivalent inorganic species, oligopeptides, oligoamines, among others) gained attention areas. this review, we discuss physicochemical characteristics formed multivalent molecules, putting special emphasis their similarities well-known polycation-polyanion complexes. addition, analyze these act versatile platforms various fields, biomedicine advanced engineering.

Язык: Английский

Процитировано

22

Motion-resolved, reference-free holographic imaging via spatiotemporally regularized inversion DOI Creative Commons
Yunhui Gao, Liangcai Cao

Optica, Год журнала: 2023, Номер 11(1), С. 32 - 32

Опубликована: Ноя. 29, 2023

Holography is a powerful technique that records the amplitude and phase of an optical field simultaneously, enabling variety applications such as label-free biomedical analysis coherent diffraction imaging. Holographic recording without reference wave has been long pursued because it obviates high experimental requirements conventional interferometric methods. However, due to ill-posed nature underlying retrieval problem, reference-free holographic imaging faced with inherent tradeoff between fidelity temporal resolution. Here, we propose general computational framework, termed spatiotemporally regularized inversion (STRIVER), achieve motion-resolved, fidelity. Specifically, STRIVER leverages signal priors in spatiotemporal domain jointly eliminate ambiguities motion artifacts, and, when combined diversity measurement schemes, produces physically reliable, time-resolved video from series intensity-only measurements. We experimentally demonstrate near-field ptychography, where dynamic freely swimming paramecia performed at framerate-limited speed 112 fps. The proposed method can be potentially extended other spectral regimes, modalities, pushing resolution toward higher limits.

Язык: Английский

Процитировано

22

Advances in Microfluidics for Single Red Blood Cell Analysis DOI Creative Commons
Georgii V. Grigorev, А. И. Лебедев,

Xiaohao Wang

и другие.

Biosensors, Год журнала: 2023, Номер 13(1), С. 117 - 117

Опубликована: Янв. 9, 2023

The utilizations of microfluidic chips for single RBC (red blood cell) studies have attracted great interests in recent years to filter, trap, analyze, and release erythrocytes various applications. Researchers this field highlighted the vast potential developing micro devices industrial academia usages, including lab-on-a-chip organ-on-a-chip systems. This article critically reviews current state-of-the-art advances microfluidics analyses, integrated sensors platforms microscopic/tomographic/spectroscopic trapping arrays (including bifurcating channels), dielectrophoretic agglutination/aggregation studies, as well clinical implications covering cancer, sepsis, prenatal, Sickle Cell diseases. Microfluidics based microarrays, sorting/counting techniques acoustic, dielectrophoretic, hydrodynamic, magnetic, optical techniques) are also reviewed. Lastly, organs on chips, multi-organ drug discovery involving described. limitations drawbacks each technology addressed future prospects discussed.

Язык: Английский

Процитировано

21

Wavefront Microscopy Using Quadriwave Lateral Shearing Interferometry: From Bioimaging to Nanophotonics DOI
Guillaume Baffou

ACS Photonics, Год журнала: 2023, Номер 10(2), С. 322 - 339

Опубликована: Янв. 17, 2023

Common cameras are only sensitive to the intensity of light, discarding an essential feature a light wave: its phase profile or, equivalently, wavefront profile. This Review focuses on rising imaging technique called quadriwave lateral shearing interferometry (QLSI), based simple use 2-dimensional diffraction grating, aka cross-grating, in front regular camera. We detail working principle QLSI and implementation optical microscope. highlight microscopy applications bioimaging nanophotonics, particular for characterization living cells, nanoparticles, 2D materials, metasurfaces, microscale temperature gradients, surface topography. Finally, we draw critical comparison with current quantitative techniques, namely, digital holography (DHM), spatial interference (SLIM), (DPM).

Язык: Английский

Процитировано

20