Genetic variations and gene expression profiles of Rice Black-streaked dwarf virus (RBSDV) in different host plants and insect vectors: insights from RNA-Seq analysis DOI Creative Commons

Arezoo Lagzian,

Abozar Ghorbani, Saeid Tabein

и другие.

BMC Genomics, Год журнала: 2024, Номер 25(1)

Опубликована: Июль 30, 2024

Rice black-streaked dwarf virus (RBSDV) is an etiological agent of a destructive disease infecting some economically important crops from the Gramineae family in Asia. While RBSDV causes high yield losses, genetic characteristics replicative viral populations have not been investigated within different host plants and insect vectors. Herein, eleven publicly available RNA-Seq datasets Chinese RBSDV-infected rice, maize, viruliferous planthopper (Laodelphax striatellus) were obtained NCBI database. The patterns SNP RNA expression profiles expected analyzed by CLC Workbench 20 Geneious Prime software. These analyses discovered 2,646 mutations with codon changes whole transcriptome forty-seven co-mutated hotspots variant frequency crucial regions S5-1, S5-2, S6, S7-1, S7-2, S9, S10 open reading frames (ORFs) which are responsible for virulence range functions. Moreover, three joint located on three-dimensional protein P9-1. infected RBSDV-susceptible rice cultivar KTWYJ3 indigenous showed more hotspot numbers than others. Our genomic fragments varied depending type. Unlike planthopper, S2, S9-1 ORFs, respectively had greatest read plants; S9-2, S7-2 expressed lowest level. findings underscore virus/host complexes effective variations gene plant viruses. analysis revealed no evidence recombination events. Interestingly, negative selection was observed at 12 except position 1015 P1 protein, where positive detected. research highlights potential SRA cycle enhances our understanding RBSDV's diversity specificity.

Язык: Английский

Warming alters life-history traits and competition in a phage community DOI
Samuel T. E. Greenrod, Daniel Cazares,

Serena Johnson

и другие.

Applied and Environmental Microbiology, Год журнала: 2024, Номер 90(5)

Опубликована: Апрель 16, 2024

Host-parasite interactions are highly susceptible to changes in temperature due mismatches species thermal responses. In nature, parasites often exist communities, and responses expected vary between host-parasite pairs. Temperature change thus has consequences for both dynamics parasite-parasite interactions. Here, we investigate the impact of warming (37°C, 40°C, 42°C) on parasite life-history traits competition using opportunistic bacterial pathogen

Язык: Английский

Процитировано

4

Coinfection accelerates transmission to new hosts despite no effects on virulence and parasite growth DOI
Diogo P. Godinho, Leonor R. Rodrigues, Sophie D. Lefevre

и другие.

Philosophical Transactions of the Royal Society B Biological Sciences, Год журнала: 2024, Номер 379(1907)

Опубликована: Июнь 24, 2024

One of the fundamental aims ecological, epidemiological and evolutionary studies host–parasite interactions is to unravel which factors affect parasite virulence. Theory predicts that virulence transmission are correlated by a trade-off, as too much expected hamper owing excessive host damage. Coinfections may each these traits and/or their correlation. Here, we used inbred lines spider mite Tetranychus urticae test how coinfection with T. evansi impacted virulence–transmission relationships at different conspecific densities. The presence on shared did not change relationship between (leaf damage) number transmitting stages (i.e. adult daughters). was hump-shaped across densities, both in single coinfections, corresponds trade-off. Moreover, adjacent hosts increased coinfection, but only low Finally, tested whether daughters were measures hosts, coinfections Traits mostly independent, meaning interspecific competitors increase without affecting Thus, impact epidemiology trait evolution, necessarily This article part theme issue ‘Diversity-dependence dispersal: determine spatial dynamics’.

Язык: Английский

Процитировано

4

Multispecies interactions and the community context of the evolution of virulence DOI Creative Commons
Claire Evensen, Andrew White, Mike Boots

и другие.

Proceedings of the Royal Society B Biological Sciences, Год журнала: 2024, Номер 291(2031)

Опубликована: Сен. 1, 2024

Pairwise host–parasite relationships are typically embedded in broader networks of ecological interactions, which have the potential to shape parasite evolutionary trajectories. Understanding this ‘community context’ pathogen evolution is vital for wildlife, agricultural and human systems alike, as pathogens infect more than one host—and these hosts may independent relationships. Here, we introduce an eco-evolutionary model examining feedback across a range host–host interactions. Specifically, analyse virulence infecting two exhibiting competitive, mutualistic or exploitative We first find that specialism necessary inter-host interactions impact evolution. Furthermore, generally increasing competition between leads higher shared while mutualism lower virulence. In particular form specialization critical—for instance, terms onward transmission, host tolerance intra-host growth rate lead distinct outcomes under same Our work provides testable hypotheses multi-host disease systems, predicts how changing interaction broadly demonstrates importance looking beyond pairwise understand realistic community contexts.

Язык: Английский

Процитировано

3

Dissecting transmission to understand parasite evolution DOI Creative Commons
Luís M. Silva, Kayla C. King, Jacob C. Koella

и другие.

PLoS Pathogens, Год журнала: 2025, Номер 21(3), С. e1012964 - e1012964

Опубликована: Март 25, 2025

Parasite transmission is a complex, multi-stage process that significantly impacts host–parasite dynamics. Transmission plays key role in epidemiology and virulence evolution, where it expected to trade off with virulence. However, the extent which classical models on virulence–transmission relationships apply real world unclear. This insight piece proposes novel framework breaks into three distinct stages: within-host infectiousness, an intermediate between-host stage (biotic or abiotic), new host infection. Each influenced by intrinsic extrinsic factors parasite, together will determine its success. Analyzing stages separately how they affect each other might enhance our understanding of host-, parasite- environmental-driven shape parasite evolution inform us about effectors act when designing disease control strategies.

Язык: Английский

Процитировано

0

Parasitism as a driver of host diversification DOI
Adam Z. Hasik, Jaakko J. Ilvonen, Tiziana P. Gobbin

и другие.

Опубликована: Апрель 23, 2025

Язык: Английский

Процитировано

0

Multispecies interactions and the community context of the evolution of virulence DOI
Claire Evensen, Andy White, Mike Boots

и другие.

bioRxiv (Cold Spring Harbor Laboratory), Год журнала: 2024, Номер unknown

Опубликована: Март 30, 2024

Abstract In nature, host-parasite/pathogen relationships are embedded in a network of ecological interactions that have the potential to shape evolutionary trajectories shared pathogens. Understanding this community context infectious disease evolution is important for wildlife, agricultural, and human systems alike – illustrated, example, by increasing risk zoonotic emergence. We introduce an eco-evolutionary model examines feedbacks across range host-host interactions. Specifically, we analyze virulence pathogen infecting hosts who themselves exhibit competitive, mutualistic, or exploitative relationships. find specialism necessary inter-host impact parasite evolution. An general result competition between leads higher virulence, while mutualism lower virulence. Across scenarios, nature specialization critical outcome instance, if only differ initial susceptibility infection, there no on contrast, terms onward transmission, host tolerance, intra-host growth rate critically For stronger transmission selects tolerance Our work provides testable hypotheses multi-host systems, predicts how changing interaction networks may broadly demonstrates importance looking beyond pairwise understand realistic natural contexts.

Язык: Английский

Процитировано

1

Dissecting transmission to understand parasite evolution DOI Creative Commons
Luís M. Silva, Kayla C. King, Jacob C. Koella

и другие.

Опубликована: Апрель 26, 2024

The prevailing theory of the evolution virulence assumes that maximizes its transmission and relies on a trade-off between parasite's rate. While this simple idea finds some empirical support, it is often criticized, in part because ambiguity about transmission, key measure pathogen fitness. In theoretical studies, has been increasingly approximated by parasite load. Transmission, however, complex parameter results from distinct steps within among hosts, with potential correlations trade-offs each steps. We propose decomposing explicitly into these would enable more precise predictions deeper understanding dynamics evolution.

Язык: Английский

Процитировано

1

Parthenogenesis affects interspecific competition between Megalurothrips usitatus and Frankliniella intonsa (Thysanoptera: Thripidae) in changing environment: evidence from life table study DOI Creative Commons

Ling-Hang Guo,

Shengyong Wu,

Run‐Na Gong

и другие.

Journal of Economic Entomology, Год журнала: 2023, Номер 116(6), С. 2043 - 2051

Опубликована: Окт. 4, 2023

The thrips Megalurothrips usitatus Bagnall and Frankliniella intonsa Trybom (Thysanoptera: Thripidae) are important pests in cowpea-growing areas of south China. Parthenogenesis is an reproductive form thysanopterans, plays role maintaining population growth. To understand the developmental characteristics these 2 species during parthenogenesis, we compared age-stage life tables M. F. on cowpea pods under natural regimes summer winter. results showed that total preadult period preoviposition were significantly longer than those both seasons. Moreover, longevity adult (29.53 days) was shorter with (34.00 summer, whereas higher fecundity (220.8 eggs/female) more oviposition days (37.83 observed winter (fecundity = 179.83 eggs/female, 33.03 days). net gross rates greater In addition, intrinsic finite increase lower intonsa, mean generation time These indicated parthenogenesis has specificity among thrips, which turn affects development, especially changing environments.

Язык: Английский

Процитировано

3

Genetic variations and gene expression profiles of Rice Black-streaked dwarf virus (RBSDV) in different host plants and insect vectors: insights from RNA-Seq analysis DOI Creative Commons

Arezoo Lagzian,

Abozar Ghorbani, Saeid Tabein

и другие.

BMC Genomics, Год журнала: 2024, Номер 25(1)

Опубликована: Июль 30, 2024

Rice black-streaked dwarf virus (RBSDV) is an etiological agent of a destructive disease infecting some economically important crops from the Gramineae family in Asia. While RBSDV causes high yield losses, genetic characteristics replicative viral populations have not been investigated within different host plants and insect vectors. Herein, eleven publicly available RNA-Seq datasets Chinese RBSDV-infected rice, maize, viruliferous planthopper (Laodelphax striatellus) were obtained NCBI database. The patterns SNP RNA expression profiles expected analyzed by CLC Workbench 20 Geneious Prime software. These analyses discovered 2,646 mutations with codon changes whole transcriptome forty-seven co-mutated hotspots variant frequency crucial regions S5-1, S5-2, S6, S7-1, S7-2, S9, S10 open reading frames (ORFs) which are responsible for virulence range functions. Moreover, three joint located on three-dimensional protein P9-1. infected RBSDV-susceptible rice cultivar KTWYJ3 indigenous showed more hotspot numbers than others. Our genomic fragments varied depending type. Unlike planthopper, S2, S9-1 ORFs, respectively had greatest read plants; S9-2, S7-2 expressed lowest level. findings underscore virus/host complexes effective variations gene plant viruses. analysis revealed no evidence recombination events. Interestingly, negative selection was observed at 12 except position 1015 P1 protein, where positive detected. research highlights potential SRA cycle enhances our understanding RBSDV's diversity specificity.

Язык: Английский

Процитировано

0