Transcriptome Analysis of Early Lateral Root Formation in Tomato DOI Creative Commons
Aiai Zhang, Qingmao Shang

Plants, Год журнала: 2024, Номер 13(12), С. 1620 - 1620

Опубликована: Июнь 12, 2024

Lateral roots (LRs) receive signals from the inter-root environment and absorb water nutrients soil. Auxin regulates LR formation, but mechanism in tomato remains largely unknown. In this study, 'Ailsa Craig' LRs appeared on third day were unevenly distributed primary roots. According to location of occurrence, divided into three equal parts: shootward part root (RB), middle (RM), tip (RT). Transverse sections days 1 6 revealed that number RB cells diameter significantly increased compared with RM RT. Using 3, we carried out transcriptome sequencing analysis. Identified genes classified 16 co-expression clusters based K-means, four associated highly expressed RB. These (3, 5, 8, 16) enriched cellulose metabolism, microtubule, peptide metabolism pathways, all closely related development. The contain numerous transcription factors linked development including

Язык: Английский

Rooted in Communication: Exploring Auxin–Salicylic Acid Nexus in Root Growth and Development DOI Open Access
Sanjay Singh Rawat, Ashverya Laxmi

Plant Cell & Environment, Год журнала: 2025, Номер unknown

Опубликована: Фев. 5, 2025

ABSTRACT Plant hormones are pivotal in orchestrating diverse aspects of growth and developmental processes. Among various phytohormones, auxin salicylic acid (SA) stand out as important regulators, often exerting opposing effects on overall plant growth. Essentially, research has indicated that SA‐mediated pathways exhibit mutual antagonism during pathogen challenge. Additionally, recent years, significant advancements have been made uncovering the molecular intricacies govern action interplay between these two phytohormones essential growth‐related In this discussion, we briefly delve into genetic mechanisms involved SA antagonism. We then analyse detail how dialogue impacts critical root development, with an emphasis transcriptional protein regulatory networks. Finally, propose potential exploring their interaction other below ground Understanding relationship could provide valuable insights for optimizing enhancing crop yields.

Язык: Английский

Процитировано

2

Auxin in Root Development DOI
Suruchi Roychoudhry, Stefan Kepinski

Cold Spring Harbor Perspectives in Biology, Год журнала: 2021, Номер unknown, С. a039933 - a039933

Опубликована: Июль 26, 2021

Suruchi Roychoudhry and Stefan Kepinski Centre for Plant Sciences, Faculty of Biological University Leeds, Leeds LS2 9JT, United Kingdom Correspondence: s.roychoudhry{at}leeds.ac.uk; s.kepinski{at}leeds.ac.uk

Язык: Английский

Процитировано

101

Fourteen Stations of Auxin DOI Open Access
Jìří Friml

Cold Spring Harbor Perspectives in Biology, Год журнала: 2021, Номер 14(5), С. a039859 - a039859

Опубликована: Авг. 16, 2021

Auxin has always been at the forefront of research in plant physiology and development. Since earliest contemplations by Julius von Sachs Charles Darwin, more than a century-long struggle waged to understand its function. This largely reflects failures, successes, inevitable progress entire field signaling Here I present 14 stations on our long sometimes mystical journey auxin. These highlights were selected give flavor show scope limits current knowledge. A special focus is put features that make auxin unique among phytohormones, such as dynamic, directional transport network, which integrates external internal signals, including self-organizing feedback. Accented are persistent mysteries controversies. The unexpected discoveries related rapid responses growth regulation recently disturbed contentment regarding understanding mechanism. new revelations, along with advances technology, usher us into new, exciting era research.

Язык: Английский

Процитировано

85

Role of transcriptional regulation in auxin-mediated response to abiotic stresses DOI Creative Commons
Davide Marzi, Patrizia Brunetti, Shashank Sagar Saini

и другие.

Frontiers in Genetics, Год журнала: 2024, Номер 15

Опубликована: Апрель 24, 2024

Global climate change (GCC) is posing a serious threat to organisms, particularly plants, which are sessile. Drought, salinity, and the accumulation of heavy metals alter soil composition have detrimental effects on crops wild plants. The hormone auxin plays pivotal role in response stress conditions through fine regulation plant growth. Hence, rapid, tight, coordinated its concentration achieved by modulation at multiple levels. Beyond structural enzymes involved biosynthesis, transport, signal transduction, transcription factors (TFs) can finely rapidly drive specific tissues. Auxin Response Factors (ARFs) such as ARF4, 7, 8, 19 many other TF families, WRKY MADS, been identified play modulating various auxin-mediated responses recent times. Here, we review most relevant literature TFs associated with biosynthetic, signalling pathways miRNA-related feedback loops major abiotic stresses. Knowledge may be utmost importance counteracting GCC future agriculture pave way for increased resilience.

Язык: Английский

Процитировано

13

FERONIA-mediated TIR1/AFB2 oxidation stimulates auxin signaling in Arabidopsis DOI

Baiyan Lu,

Shengnan Wang, Hanqian Feng

и другие.

Molecular Plant, Год журнала: 2024, Номер 17(5), С. 772 - 787

Опубликована: Апрель 4, 2024

Язык: Английский

Процитировано

9

Cell wall dynamic changes and signaling during plant lateral root development DOI Open Access
Erlei Shang, Qiang Tu, Zipeng Yu

и другие.

Journal of Integrative Plant Biology, Год журнала: 2025, Номер unknown

Опубликована: Янв. 29, 2025

Lateral roots (LRs), are an important component of plant roots, playing a crucial role in anchoring the soil and facilitating uptake water nutrients. As post-embryonic organs, LRs originate from pericycle cells primary root, their formation is characterized by precise regulation cell division complex intercellular interactions, both which closely tied to wall regulation. Considering rapid advances molecular techniques over past three decades, we reframe understanding dynamic change during LR development summarizing factors that precipitate these changes effects, as well regulated signals involved. Additionally, discuss current challenges this field propose potential solutions.

Язык: Английский

Процитировано

1

Comprehensive Genomic Analysis of Trihelix Transcription Factor Genes and Their Expression Underlying Abiotic Stress in Euphrates Poplar (Populus euphratica) DOI Creative Commons

Boniface Ndayambaza,

Jianhua Si,

Xin Zhao

и другие.

Plants, Год журнала: 2025, Номер 14(5), С. 662 - 662

Опубликована: Фев. 21, 2025

Trihelix transcription factors (TTFs) are light-sensitive proteins characterized by a triple-helix structure that play crucial role in regulating plant growth and development, especially response to abiotic stressors, such as drought salinity. This intriguing family of has been the focus extensive functional studies across various species. Despite their recognized significance, trihelix Populus euphratica not thoroughly explored, warranting more attention. study identifies 35 full-length genes euphratica, which grouped into five categories (GT-1, GT-γ, GT-2, SIP1, SH4) based on conserved motifs structural similarities, these unevenly distributed 19 linkage groups chromosomes. A syntenic analysis was conducted P. comparing it other The promoters contain numerous stress-responsive cis-elements, indicating potential for respond stress. RT-qPCR discovered significant induction gene salt stress, with 21 PeuTTF exhibiting distinct expression levels under conditions responsive Notably, heightened PeuTTF6, PeuTTF9, PeuTTF20 observed both roots leaves during suggesting TTF is connected plant’s conditions. Additionally, increases were noted PeuTTF2, PeuTTF31, PeuTTF32, may be convoluted These discoveries highlight improving tolerance plants. We offer new perspectives evolutionary trends variants we establish groundwork understanding properties salt-stressed drought-stressed provides opportunities advancement desert poplar agriculture have wider ramifications tree breeding techniques targeted at performance durability, particularly dry areas.

Язык: Английский

Процитировано

1

Biosynthesis‐ and transport‐mediated dynamic auxin distribution during seed development controls seed size in Arabidopsis DOI
Huabin Liu, Qiong Luo, Chao Tan

и другие.

The Plant Journal, Год журнала: 2023, Номер 113(6), С. 1259 - 1277

Опубликована: Янв. 17, 2023

Auxin is indispensable to the fertilization-induced coordinated development of embryo, endosperm, and seed coat. However, little attention has been given distribution pattern, maintenance mechanism, function auxin throughout process development. In present study, we found that response signals display a dynamic pattern during Arabidopsis Shortly after fertilization, strong were observed at funiculus, chalaza, micropylar integument where embryo attaches. Later, additional appeared middle layer inner (ii1') above chalaza whole outer (oi1). These peaked when was mature, then declined upon desiccation disappeared in dried seed. biosynthesis genes, including ASB1, TAA1, YUC1, YUC4, YUC8, YUC9, contributed accumulation funiculus efflux carrier PIN3 influx AUX1 also polar expressed ii1 (innermost integument) oi1 layers showed localization. both endosperm displayed uniform Further research demonstrated coat regulates size. Transgenic plants specifically express YUC8 gene oi2 or produced larger seeds. results provide useful tools for cultivating high-yielding crops.

Язык: Английский

Процитировано

18

Asymmetric cell division in plant development DOI Creative Commons
Yi Zhang, Tongda Xu, Juan Dong

и другие.

Journal of Integrative Plant Biology, Год журнала: 2023, Номер 65(2), С. 343 - 370

Опубликована: Янв. 7, 2023

Abstract Asymmetric cell division (ACD) is a fundamental process that generates new types during development in eukaryotic species. In plant development, post‐embryonic organogenesis driven by ACD universal and more important than animals, which organ pattern preset embryogenesis. Thus, provides powerful system to study molecular mechanisms underlying ACD. During the past decade, tremendous progress has been made our understanding of key components involved this plants. Here, we present an overview how determined regulated multiple biological processes compare their conservation specificity among different model systems. We also summarize roles phytohormones regulation Finally, conclude with overarching paradigms principles govern consider technologies can be exploited fill knowledge gaps make advances field.

Язык: Английский

Процитировано

17

PeFUS3 Drives Lateral Root Growth Via Auxin and ABA Signalling Under Drought Stress in Populus DOI
Shujing Liu, Han Zhang,

Xiao‐Ting Jin

и другие.

Plant Cell & Environment, Год журнала: 2024, Номер unknown

Опубликована: Сен. 24, 2024

ABSTRACT Changes in root system architecture are vital for plant adaptation to drought stress, yet the underlying molecular mechanisms of this process remain largely elusive. Here, FUSCA3 ( FUS3 ), a B3 domain transcription factor isolated from Populus euphratica, was found be an important gene regulating lateral (LR) development under stress. The expression PeFUS3 strongly induced by ABA and dehydration treatments. Overexpressing poplar 84 K P. alba × glandulosa ) positively regulated LR growth enhanced tolerance, while knockout lines, generated CRISPR/Cas9 system, displayed repressed weakened tolerance. Further investigation demonstrated that activated PIN2 , PIN6a AUX1 which were key genes involved auxin transport, suggesting modulated stress through signalling. Moreover, directly upregulated PePYL3 expression, overexpressing lines exhibited significantly increased resistance. In addition, PeABF2, responsive factor, interacted with its transcription, indicating signalling pathway. Taken together, is regulator, maintaining modulating crosstalk

Язык: Английский

Процитировано

8