Ecology Letters,
Год журнала:
2021,
Номер
24(3), С. 520 - 532
Опубликована: Янв. 6, 2021
Abstract
Functional
responses
relate
a
consumer's
feeding
rates
to
variation
in
its
abiotic
and
biotic
environment,
providing
insight
into
consumer
behaviour
fitness,
underpinning
population
food‐web
dynamics.
Despite
their
broad
relevance
long‐standing
history,
we
show
here
that
the
types
of
density
dependence
found
classic
resource‐
consumer‐dependent
functional‐response
models
equate
strong
often
untenable
assumptions
about
independence
processes
underlying
rates.
We
first
demonstrate
mathematically
how
quantify
non‐independence
between
interference
on
multiple
resources.
then
analyse
two
large
collections
data
sets
is
pervasive
borne
out
previously
hidden
forms
dependence.
Our
results
provide
new
lens
through
which
view
disentangle
biological
underpinnings
species
interactions
multi‐species
contexts.
PeerJ,
Год журнала:
2024,
Номер
12, С. e16996 - e16996
Опубликована: Фев. 21, 2024
Background
Urban
gardens,
despite
their
transformed
nature,
serve
as
invaluable
microcosms
for
a
quantitative
examination
of
floral
resource
provision
to
urban
pollinators,
considering
the
plant’s
origin.
Thus,
knowledge
has
increased,
emphasizing
importance
these
green
areas
hosting
and
conserving
pollinator
communities.
However,
there
is
significant
gap
concerning
changing
availability
native
exotic
resources
over
time
impact
on
structuring
interaction
networks
with
specific
pollinators.
Methods
Over
year-long
period,
monthly
surveys
were
conducted
record
both
plant
species
visited
by
hummingbirds
in
an
garden
at
Tlaxcala,
Mexico.
Flower
visits
recorded,
total
flowers
each
tallied.
Additionally,
all
observed
recorded
during
transect
walks,
regardless
visits,
determine
hummingbird
abundance.
The
interactions
summarized
using
matrices,
network
descriptors
like
connectance,
specializacion,
nestedness,
modularity
computed.
Plant
core
periphery
also
identified.
Lastly,
simulations
performed
assess
network’s
resilience
extinction
highly
connected
species,
including
those
previously
situated
core.
Results
We
4,674
between
28
eight
species.
majority
plants
showed
ornithophilic
syndrome,
20
considered
exotic.
Despite
asynchronous
flowering,
was
overlap
across
different
throughout
year.
Exotic
Jacaranda
mimosifolia
Nicotiana
glauca
produced
more
annually
than
abundance
varied
study,
Saucerottia
berillyna
being
most
abundant
plant-hummingbird
displayed
high
indicating
generalization
interaction.
Significant
nestedness
observed,
mainly
influenced
enriched
plants,
while
Basilinna
leucotis
Cynanthus
latirostris
played
central
roles
among
hummingbirds.
Network
remained
generally
high.
Conclusions
Our
findings
provide
valuable
insights
into
dynamics
structure
influence
perturbations.
Understanding
managing
such
crucial
conservation
sustainable
functioning
ecosystems.
Biotropica,
Год журнала:
2019,
Номер
52(1), С. 81 - 89
Опубликована: Дек. 16, 2019
Abstract
Seed
dispersal
interactions
involve
key
ecological
processes
in
tropical
forests
that
help
to
maintain
ecosystem
functioning.
Yet
this
functionality
may
be
threatened
by
increasing
habitat
loss,
defaunation,
and
fragmentation.
However,
generalist
species,
their
interactions,
can
benefit
from
the
change
caused
human
disturbance
while
more
specialized
mostly
disappear.
Therefore,
changes
structure
of
local,
within
fragment,
networks
expected.
Here
we
investigated
how
seed
along
a
gradient
We
analyzed
16
bird
assemblages
forest
fragments
biodiversity‐rich
ecosystem.
found
significant
species–,
interaction–,
network–area
relationships,
yet
later
was
determined
number
species
remaining
each
community.
The
frugivorous
plant
links
per
decreases
as
area
is
lost
fragmented
landscape.
In
contrast,
network
nestedness
has
negative
relationship
with
fragment
area,
suggesting
an
generalization
Network
specialization
not
significantly
affected
indicating
some
properties
invariant
disturbance.
Still,
local
extinction
partner
paralleled
loss
specialist–specialist
bird–plant
associations,
suggests
functional
homogenization
system
lost.
Our
study
provides
empirical
evidence
for
relationships
driven
presence/absence
remnant
they
perform.
Spanish
available
online
material.
Ecology Letters,
Год журнала:
2020,
Номер
23(10), С. 1511 - 1521
Опубликована: Авг. 10, 2020
The
persistence
of
a
species
in
given
place
not
only
depends
on
its
intrinsic
capacity
to
consume
and
transform
resources
into
offspring,
but
also
how
changing
environmental
conditions
affect
growth
rate.
However,
the
complexity
factors
has
typically
taken
us
choose
between
understanding
predicting
species.
To
tackle
this
limitation,
we
propose
probabilistic
approach
rooted
statistical
concepts
ensemble
theory
applied
mechanics
mathematical
structural
stability
population
dynamics
models
-
what
call
forecasting.
We
show
new
allows
estimate
probability
for
single
local
communities;
understand
interpret
conditional
information
have
concerning
system;
provide
out-of-sample
predictions
as
good
best
experimental
approaches
without
need
extensive
amounts
data.
Nature Communications,
Год журнала:
2020,
Номер
11(1)
Опубликована: Июль 3, 2020
Abstract
The
complexity
of
an
ecological
community
can
be
distilled
into
a
network,
where
diverse
interactions
connect
species
in
web
dependencies.
Species
interact
directly
with
each
other
and
indirectly
through
environmental
effects,
however
to
our
knowledge
the
role
these
ecosystem
engineers
has
not
been
considered
network
models.
Here
we
explore
dynamics
assembly,
colonization
extinction
depends
on
constraints
imposed
by
trophic,
service,
engineering
We
show
that
assembly
model
reproduces
many
key
features
systems,
such
as
generalists
during
realistic
maximum
trophic
levels,
increased
nestedness
mutualistic
interactions.
find
large
nonlinear
effects
rates.
While
small
numbers
reduce
stability
increasing
primary
extinctions,
larger
increase
reducing
extinctions
cascade
magnitude.
Our
results
suggest
may
enhance
diversity
while
persistence
facilitating
limiting
competitive
exclusion.
Abstract
Describing
variation
of
species
interaction
networks
across
space
and
time
promises
a
better
understanding
how
communities
respond
to
global
change.
To
understand
this
variation,
it
has
been
suggested
partition
network
dissimilarity
into
one
component
driven
by
turnover,
that
is,
changes
in
community
composition,
another
reflecting
rewiring,
flexibility
interactions
among
shared
species.
The
latter
makes
strong
case
for
investing
the
enormous
effort
empirically
recording
interactions,
instead
simply
building
based
on
data.
Here,
I
present
flexible
R
function
(available
package
bipartite)
calculate
its
components,
with
binary
quantitative
networks.
With
new
tool,
compare
two
published
methods
partitioning
dissimilarity,
using
conceptual
examples,
plant–pollinator
networks,
set
simulations.
This
comparison
highlights
method
received
most
attention
overestimates
importance
rewiring
total
dissimilarity.
In
contrast,
an
earlier‐proposed
is
derived
from
additive
sets
thus
accurately
represents
components.
Furthermore,
argue
term
not
well
defined
ecology
there
are
reasons
why
both
overestimate
particular
availability
unified
multiple
aspects
will
foster
critical
application
characterize
dynamics
identify
underlying
drivers.
Studies
have
be
more
careful
choice
interpretation.
Methods in Ecology and Evolution,
Год журнала:
2023,
Номер
14(5), С. 1333 - 1345
Опубликована: Март 21, 2023
Abstract
The
prediction
of
species
interactions
is
gaining
momentum
as
a
way
to
circumvent
limitations
in
data
volume.
Yet,
ecological
networks
are
challenging
predict
because
they
typically
small
and
sparse.
Dealing
with
extreme
class
imbalance
challenge
for
most
binary
classifiers,
there
currently
no
guidelines
how
predictive
models
can
be
trained
this
specific
problem.
Using
simple
mathematical
arguments
numerical
experiments
which
variety
classifiers
(for
supervised
learning)
on
simulated
networks,
we
develop
series
related
the
choice
measures
use
model
selection,
ways
assemble
training
dataset.
Neither
classifier
accuracy
nor
area
under
receiver
operating
characteristic
curve
(ROC‐AUC)
informative
performance
interaction
prediction.
precision‐recall
(PR‐AUC)
fairer
assessment
performance.
In
some
cases,
even
standard
lead
selecting
more
biased
effect
connectance
strong.
amount
correction
apply
dataset
depends
network
connectance,
measure
optimized,
only
weakly
classifier.
These
results
reveal
that
machines
task,
virtually
all
composition
set
needs
fine‐tuned
before
performing
actual
training.
We
discuss
these
consequences
context
low
volume
data.
Ecology Letters,
Год журнала:
2023,
Номер
26(6), С. 831 - 842
Опубликована: Март 27, 2023
Theory
posits
that
the
persistence
of
species
in
ecological
communities
is
shaped
by
their
interactions
within
and
across
trophic
guilds.
However,
we
lack
empirical
evaluations
how
structure,
strength
sign
biotic
drive
potential
to
coexist
diverse
multi-trophic
communities.
Here,
model
community
feasibility
domains,
a
theoretically
informed
measure
multi-species
coexistence
probability,
from
grassland
comprising
more
than
45
on
average
three
guilds
(plants,
pollinators
herbivores).
Contrary
our
hypothesis,
increasing
complexity,
measured
either
as
number
or
richness,
did
not
decrease
feasibility.
Rather,
observed
high
degrees
self-regulation
niche
partitioning
allow
for
maintaining
larger
levels
higher
Our
results
show
are
random
nature
both
structures
significantly
contribute
diversity.
Abstract
Population
declines
of
pollinators
constitute
a
major
concern
for
the
fate
biodiversity
and
associated
ecosystem
services
in
context
global
change.
Massive
pollinator
populations
driven
by
habitat
loss,
pollution,
climate
change
have
been
reported,
whose
consequences
at
community
levels
remain
elusive.
We
conducted
mathematical
modeling
computer
simulation
study
to
assess
dynamic
plants
pollinators.
Specifically,
we
evaluated
effects
increased
mortality
decreased
carrying
capacity
specialist
vs.
generalist
effective
ineffective
visiting
on
long‐term
biomass
species
persistence.
Our
results
reveal
that
larval
competition
space
among
larvae
had
greatest
impacts
decline
diversity.
In
contrast,
largest
sustained
decreases
were
adult
spite
small
increase
Decreased
diversity
led
turn
plant
Attacking
with
high
degree
connected
mostly
low‐degree
produced
losses
Pollinator
effectiveness
no
noticeable
effect
illuminate
our
understanding
maintenance
biodiversity.