Dissection
of
neural
circuitry
underlying
behaviors
is
a
central
theme
in
neurobiology.
Chemical
transmission
the
predominant
model
for
signaling
between
neurons.
Here
we
have
created
lines
target
all
chemical
corresponding
genes
Drosophila
after
modifying
GFP
RNA
interference,
Flp-out
and
CRISPR/Cas9
technologies.
After
thorough
validation,
three
strategies
are
demonstrated
to
be
highly
effective
with
best
using
chromatin-peptide
fused
Cas9
variants
scaffold
optimized
sgRNAs.
As
proof
principle,
conduct
comprehensive
intersection
analysis
chemoconnectome
(CCT)
expression
profiles
clock
neurons
chemoconnectomics
driver
lines,
leading
finding
45
CCT
presented
Mutating
these
specifically
revealed
that
loss
neuropeptide
CNMa
two
posterior
dorsal
(DN1p)
or
its
receptor
(CNMaR)
caused
advanced
morning
activity,
opposite
mutants
PDF
(PDFR).
These
results
demonstrate
effectiveness
conditional
libraries
indicate
an
antagonistic
relationship
CNMa-CNMaR
PDF-PDFR
regulating
anticipation.
PLoS Biology,
Год журнала:
2024,
Номер
22(12), С. e3002918 - e3002918
Опубликована: Дек. 2, 2024
Organisms
detect
temperature
signals
through
peripheral
neurons,
which
relay
them
to
central
circadian
networks
drive
adaptive
behaviors.
Despite
recent
advances
in
Drosophila
research,
how
circuits
integrate
cues
with
regulate
sleep/wake
patterns
remains
unclear.
In
this
study,
we
used
the
FlyWire
brain
electron
microscopy
connectome
map
neuronal
connections,
identifying
lateral
posterior
neurons
LPNs
as
key
nodes
for
integrating
information
into
network.
receive
input
from
both
and
temperature-sensing
promoting
sleep
behavior.
Through
analysis,
genetic
manipulation,
behavioral
assays,
demonstrated
that
LPNs,
downstream
of
thermo-sensitive
anterior
cells
(ACs),
suppress
activity-promoting
dorsal
LNds
via
AstC
pathway,
inducing
Disrupting
LPN-LNd
communication
either
AstCR1
RNAi
or
an
mutant
significantly
impairs
heat-induced
reduction
evening
activity
peak.
Conversely,
optogenetic
calcium
imaging
assays
revealed
cold-activated
subsequently
stimulate
NPF-NPFR
signaling,
establishing
a
negative
feedback
loop.
This
mechanism
limits
LNd
activation
appropriate
levels,
thereby
fine-tuning
peak
increase
at
lower
temperatures.
conclusion,
our
study
constructed
comprehensive
centered
on
identified
novel
peptidergic
circuit
coordinates
signals,
offering
new
insights
regulation
.
Dissection
of
neural
circuitry
underlying
behaviors
is
a
central
theme
in
neurobiology.
We
have
previously
proposed
the
concept
chemoconnectome
(CCT)
to
cover
entire
chemical
transmission
between
neurons
and
target
cells
an
organism
created
tools
for
studying
it
(CCTomics)
by
targeting
all
genes
related
CCT
Drosophila
.
Here
we
lines
conditional
manner
after
modifying
GFP
RNA
interference,
Flp-out,
CRISPR/Cas9
technologies.
All
three
strategies
been
validated
be
highly
effective,
with
best
using
chromatin-peptide
fused
Cas9
variants
scaffold
optimized
sgRNAs.
As
proof
principle,
conducted
comprehensive
intersection
analysis
expression
profiles
clock
neurons,
uncovering
43
present
neurons.
Specific
elimination
each
from
revealed
that
loss
neuropeptide
CNMa
two
posterior
dorsal
(DN1ps)
or
its
receptor
(CNMaR)
caused
advanced
morning
activity,
indicating
suppressive
role
CNMa-CNMaR
on
anticipation,
opposite
promoting
PDF-PDFR
anticipation.
These
results
demonstrate
effectiveness
CCTomics
here
establish
antagonistic
relationship
signaling
regulating
Research Square (Research Square),
Год журнала:
2024,
Номер
unknown
Опубликована: Янв. 18, 2024
Sleep
and
circadian
rhythm
disruptions
are
comorbid
features
of
many
pathologies
can
negatively
influence
numerous
health
conditions,
including
degenerative
diseases,
metabolic
illnesses,
cancer,
various
neurological
disorders.
Genetic
association
studies
linking
sleep
disturbances
with
disease
susceptibility
have
mainly
focused
on
changes
in
gene
expression
due
to
mutations,
such
as
single-nucleotide
polymorphisms.
Thus,
associations
between
and/or
alternative
polyadenylation
(APA),
particularly
the
context
other
challenges,
largely
undescribed.
APA
is
a
process
that
generates
transcript
isoforms
from
same
gene,
resulting
effects
mRNA
translation,
stability,
localization,
subsequent
function.
Here,
we
identified
unique
APAs
rat
brain
exhibit
time-of-day-dependent
oscillations
well
altered
by
deprivation
recovery
period.
Genes
affected
usage
include
Journal of Neuroscience,
Год журнала:
2024,
Номер
unknown, С. e0389232024 - e0389232024
Опубликована: Март 14, 2024
Sleep
is
regulated
by
homeostatic
sleep
drive
and
the
circadian
clock.
While
tremendous
progress
has
been
made
in
elucidating
molecular
components
of
core
oscillator,
output
mechanisms
which
this
robust
oscillator
generates
rhythmic
behaviour
remain
poorly
understood.
At
cellular
level,
growing
evidence
suggests
that
subcircuits
master
pacemaker
suprachiasmatic
nucleus
(SCN)
mammals
clock
network
Drosophila
regulate
distinct
aspects
sleep.
Thus,
to
identify
novel
molecules
regulating
timing
sleep,
we
conducted
a
large-scale
screen
mouse
SCN-enriched
genes
.
Here,
show
Tob
(Transducer
ERB-B2)
regulates
onset
at
night
female
fruit
flies.
Knockdown
pan-neuronally,
either
constitutively
or
conditionally,
advances
night.
We
specifically
required
“evening
neurons”
(the
LNds
5
th
s-LNv)
for
proper
onset.
levels
cycle
clock-dependent
manner
these
neurons.
Silencing
“evening”
neurons
results
an
advanced
night,
similar
seen
with
knockdown.
Finally,
sharp
intracellular
recordings
demonstrate
amplitude
kinetics
LNd
post-synaptic
potentials
(PSPs)
between
day
cycling
attenuated
knockdown
cells.
Our
data
suggest
acts
as
clock-output
molecule
subset
potentiate
their
activity
evening
enable
Significance
Summary
Well-timed,
high
quality
critical
human
health
function.
Elucidating
how
may
reveal
targets
intervening
process.
However,
our
understanding
genetic
underlying
regulation
limited.
From
high-throughput
behavioral
,
identified
gene
tob
(
transducer
erb-b2
)
under
control,
facilitates
potentiation
specific
population
work
mechanism
potentiating
function
Dissection
of
neural
circuitry
underlying
behaviors
is
a
central
theme
in
neurobiology.
We
have
previously
proposed
the
concept
chemoconnectome
(CCT)
to
cover
entire
chemical
transmission
between
neurons
and
target
cells
an
organism
created
tools
for
studying
it
(CCTomics)
by
targeting
all
genes
related
CCT
Drosophila
.
Here
we
lines
conditional
manner
after
modifying
GFP
RNA
interference,
Flp-out,
CRISPR/Cas9
technologies.
All
three
strategies
been
validated
be
highly
effective,
with
best
using
chromatin-peptide
fused
Cas9
variants
scaffold
optimized
sgRNAs.
As
proof
principle,
conducted
comprehensive
intersection
analysis
expression
profiles
clock
neurons,
uncovering
43
present
neurons.
Specific
elimination
each
from
revealed
that
loss
neuropeptide
CNMa
two
posterior
dorsal
(DN1ps)
or
its
receptor
(CNMaR)
caused
advanced
morning
activity,
indicating
suppressive
role
CNMa-CNMaR
on
anticipation,
opposite
promoting
PDF-PDFR
anticipation.
These
results
demonstrate
effectiveness
CCTomics
here
establish
antagonistic
relationship
signaling
regulating
Research Square (Research Square),
Год журнала:
2024,
Номер
unknown
Опубликована: Авг. 8, 2024
Abstract
Disruption
of
sleep
and
circadian
rhythms
are
a
comorbid
feature
many
pathologies,
can
negatively
influence
health
conditions,
including
neurodegenerative
disease,
metabolic
illness,
cancer,
various
neurological
disorders.
Genetic
association
studies
linking
disturbances
with
disease
susceptibility
have
mainly
focused
on
changes
in
gene
expression
due
to
mutations,
such
as
single-nucleotide
polymorphisms.
The
interaction
between
and/or
the
use
Alternative
Polyadenylation
(APA)
has
been
largely
undescribed,
particularly
context
other
APA
is
process
that
generates
transcript
isoforms
same
affecting
its
mRNA
translation,
stability,
localization,
subsequent
function.
Here
we
identified
unique
APAs
expressed
rat
brain
over
time-of-day,
immediately
following
deprivation,
recovery
period.
From
these
data,
performed
secondary
analysis
sleep-
or
time-of-day
associated
PASs
recently
described
APA-linked
human
disorder
genes.
Disruption
of
sleep
and
circadian
rhythms
are
a
comorbid
feature
many
pathologies,
can
negatively
influence
health
conditions,
including
neurodegenerative
disease,
metabolic
illness,
cancer,
various
neurological
disorders.
Genetic
association
studies
linking
disturbances
with
disease
susceptibility
have
mainly
focused
on
changes
in
gene
expression
due
to
mutations,
such
as
single-nucleotide
polymorphisms.
The
interaction
between
and/or
the
use
Alternative
Polyadenylation
(APA)
has
been
largely
undescribed,
particularly
context
other
APA
generates
transcript
isoforms
by
utilizing
polyadenylation
sites
(PASs)
from
same
affecting
its
mRNA
translation,
stability,
localization,
subsequent
function.
Here
we
identified
unique
APAs
expressed
rat
brain
over
time-of-day,
immediately
following
deprivation,
recovery
period.
From
these
data,
performed
secondary
analysis
sleep-
or
time-of-day
associated
PASs
recently
described
APA-linked
human
disorder
genes.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 7, 2024
In
Drosophila,
about
250
clock
neurons
in
the
brain
form
a
network
that
orchestrates
circadian
rhythmicity.
Among
them,
eight
small
Lateral
ventral
Neurons
(s-LNvs)
play
critical
role,
synchronizing
ensemble
via
neuropeptide
Pigment-Dispersing
Factor
(PDF).
Moreover,
their
neurites
show
daily
variations
morphology,
PDF
levels,
synaptic
markers
and
connectivity.
This
process,
called
structural
plasticity,
is
ill-defined
at
subcellular
level.
Here,
we
present
3D
volumes
of
s-LNv
terminals
generated
by
Serial
Block-face
Scanning
Electron
Microscopy
(SBEM)
three
key
time
points,
two
hours
before
lights-ON,
after
lights-OFF.
We
report
reduction
number
neuronal
varicosities
night,
which
reflects
(and
probably
regulates)
cycling
components
found
therein.
Indeed,
morning
observed
more
presynaptic
sites
increased
accumulation
release
dense
core
vesicles.
These
rhythms
were
paralleled
periodic
changes
mitochondrial
structure
suggest
modulation
activity.
propose
plasticity
functionally
relevant
structures
within
cyclically
modulates
influence
s-LNvs
on
network.
Environmental
rhythms
such
as
the
daily
light-dark
cycle
selected
for
endogenous
clocks.
These
clocks
predict
regular
environmental
changes
and
provide
basis
well-timed
adaptive
homeostasis
in
physiology
behavior
of
organisms.
Endogenous
are
oscillators
that
based
on
positive
feedforward
negative
feedback
loops.
They
generate
stable
even
under
constant
conditions.
Since
weak
interactions
between
allow
autonomous
synchronization,
coupling/synchronization
provides
self-organized
physiological
timing.
Amongst
most
thoroughly
researched
circadian
clock
neurons
mammals
insects.
comprise
nuclear
clockworks
transcriptional/translational
loops
(TTFL)
~24
h
gene
expression
entrained
to
day-night
cycle.
It
is
generally
assumed
this
TTFL
clockwork
drives
all
oscillations
within
cells,
being
any
rhythm
Instead
current
gene-based
hierarchical
model
we
here
a
systems
view
We
suggest
coupled
system
posttranslational
loop
(PTFL)
oscillators/clocks
run
at
multiple
timescales
governs
adaptive,
dynamic
behavior.
focus
mammalian
insect
timescales.
neuronal
plasma
membrane-associated
signalosomes
constitute
specific
PTFL
localized
but
interlinked
membrane
potential
intracellular
messengers
with
frequencies.
In
each
neuron
multiscale
form
temporally
structured
oscillatory
network
common
complex
frequency-band
comprising
superimposed
oscillations.
Coupling
oscillator/clock
next
level
complexity
an
network.
This
systemic
molecular
cellular
suggested
cycles
through
homeostatic
setpoints
characteristic
hallmark.
propose
mechanisms
plasticity
maintain
stability
these
setpoints,
whereas
Hebbian
enables
switching
via
coupling
factors,
like
biogenic
amines
and/or
neuropeptides.
reprogram
new
frequency,
setpoint.
Our
novel
hypothesis
up
experimental
challenge.