Ecological patterns of seed microbiome diversity, transmission, and assembly

Current Opinion in Microbiology, Год журнала: 2017, Номер 37, С. 15 - 22

Опубликована: Апрель 21, 2017

Язык: Английский

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The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome

Microbiome, Год журнала: 2018, Номер 6(1)

Опубликована: Фев. 12, 2018

Microorganisms serve important functions within numerous eukaryotic host organisms. An understanding of the variation in plant niche-level microbiome, from rhizosphere soils to canopies, is imperative gain a better how both structural and functional processes microbiomes impact health overall holobiome. Using Populus trees as model ecosystem, we characterized archaeal/bacterial fungal microbiome across 30 different tissue-level niches replicated deltoides hybrid trichocarpa × individuals using 16S ITS2 rRNA gene analyses. Our analyses indicate that varied primarily broader habitat classes (leaves, stems, roots, soils) regardless genotype, except for communities leaf niches, which were greatly impacted by genotype. Differences between tree genotypes are evident elevated presence two potential pathogens, Marssonina brunnea Septoria sp., on P. may turn be contributing divergence composition. Archaeal/bacterial diversity increased leaves, stem, root, soil habitats, whereas was greatest stems soils. This study provides holistic structure bioenergy relevant host, one most complete any plant. As such, it constitutes detailed atlas or map further hypothesis testing significance individual microbial taxa specific habitats baseline comparisons other species.

Язык: Английский

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Plant microbiome–an account of the factors that shape community composition and diversity

Current Plant Biology, Год журнала: 2020, Номер 23, С. 100161 - 100161

Опубликована: Июль 1, 2020

Plants live in association with diverse microorganisms, collectively called the microbiome. These microbes either inside (endosphere) or outside (episphere) of plant tissues. Microbes play important roles ecology and physiology plants. Significant progress has been made revealing structure dynamics microbiome last few years. Various factors related to host, as well environment influence community composition diversity This review aimed provide a general account (host, microbe environment) that drive microbial plant. First, we gave an overview aboveground belowground microbiomes. Next, discussed which host are involved variation plants followed by importance microbe-microbe interactions elements structuring

Язык: Английский

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Soil pH correlates with the co-occurrence and assemblage process of diazotrophic communities in rhizosphere and bulk soils of wheat fields

Soil Biology and Biochemistry, Год журнала: 2018, Номер 121, С. 185 - 192

Опубликована: Март 20, 2018

Язык: Английский

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Antibiotic Resistomes in Plant Microbiomes

Trends in Plant Science, Год журнала: 2019, Номер 24(6), С. 530 - 541

Опубликована: Март 17, 2019

Язык: Английский

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