bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Ноя. 1, 2024
Abstract
Pseudomonas
aeruginosa
is
a
prominent
bacterial
pathogen
that
causes
several
nosocomial
infections
and
notorious
for
its
environmental
resilience
rapid
development
of
resistance
to
frontline
antibiotics.
A
major
cause
mortality
morbidity
among
cystic
fibrosis
patients,
multidrug-resistant
P.
often
targeted
with
the
antibiotic
colistin
as
last
option.
However,
increasing
reports
matter
significant
concern.
Though
molecular
mechanisms
responsible
are
well
known,
evolutionary
trajectory
an
important
area
investigation.
In
this
work,
using
adaptive
laboratory
evolution
(ALE)
approach
we
have
evolved
colistin-sensitive
ancestral
strain
resistant
one.
During
process
in
106
generations,
MIC
was
increased
32-fold.
The
had
lower
fitness
than
evidenced
by
growth
rate
higher
doubling
time.
Moreover,
produced
more
biofilm
less
pyocyanin.
Interestingly,
showed
collateral
sensitivity
antibiotics
such
co-trimoxazole,
rifampicin,
kanamycin,
tigecycline,
penicillin,
ampicillin,
teicoplanin.
On
analysing
various
TCS
modules
involved
novel
missense
mutation
(V136G)
detected
PmrB
sensor
kinase.
Bioinformatics
prediction
indicated
could
be
deleterious,
though
functionality
mutant
remains
validated
experimentally.
npj Antimicrobials and Resistance,
Год журнала:
2025,
Номер
3(1)
Опубликована: Фев. 28, 2025
R-pyocins,
bacteriocin-like
proteins
produced
by
Pseudomonas
aeruginosa,
present
a
promising
alternative
to
phage
therapy
and/or
adjunct
currently
used
antimicrobials
in
treating
bacterial
infections
due
their
targeted
specificity,
lack
of
replication,
and
stability.
This
review
explores
the
structural,
mechanistic,
therapeutic
aspects
including
potential
for
chronic
infection
management,
discusses
recent
advances
delivery
methods,
paving
way
novel
antimicrobial
applications
clinical
settings.
The Journal of Infectious Diseases,
Год журнала:
2024,
Номер
230(3), С. e536 - e547
Опубликована: Март 5, 2024
Abstract
Background
Pseudomonas
aeruginosa
is
a
multidrug-resistant
pathogen
causing
recalcitrant
pulmonary
infections
in
people
with
cystic
fibrosis
(pwCF).
Cystic
transmembrane
conductance
regulator
(CFTR)
modulators
have
been
developed
that
partially
correct
the
defective
chloride
channel
driving
disease.
Despite
many
clinical
benefits,
studies
adults
demonstrated
while
P.
sputum
load
decreases,
chronic
infection
persists.
Here,
we
investigate
how
pwCF
may
change
altered
lung
environment
after
CFTR
modulation.
Methods
strains
(n
=
105)
were
isolated
from
of
11
chronically
colonized
at
baseline
and
up
to
21
months
posttreatment
elexacaftor-tezacaftor-ivacaftor
or
tezacaftor-ivacaftor.
Phenotypic
characterization
comparative
genomics
performed.
Results
Clonal
lineages
persisted
therapy,
no
evidence
displacement
by
alternative
strains.
We
identified
commonly
mutated
genes
among
patient
isolates
be
positively
selected
for
CFTR-modulated
lung.
However,
classic
phenotypes
such
as
mucoid
morphology
sustained,
remained
just
resistant
clinically
relevant
antibiotics.
Conclusions
benefits
modulators,
clonal
persist
prove
difficult
manage
future,
especially
advanced
The
airway
milieu
of
individuals
with
muco-obstructive
diseases
(MADs)
is
defined
by
the
accumulation
dehydrated
mucus
due
to
hyperabsorption
surface
liquid
and
defective
mucociliary
clearance.
Pathological
becomes
progressively
more
viscous
age
disease
severity
concentration
overproduction
mucin
host-derived
extracellular
DNA
(eDNA).
Respiratory
MADs
provides
a
niche
for
recurrent
persistent
colonization
respiratory
pathogens,
including
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 15, 2025
Pf
bacteriophages,
lysogenic
viruses
that
infect
Pseudomonas
aeruginosa
(Pa),
are
implicated
in
the
pathogenesis
of
chronic
Pa
infections;
phage-infected
(Pf+)
strains
known
to
predominate
people
with
cystic
fibrosis
(pwCF)
who
older
and
have
more
severe
disease.
However,
transmission
patterns
underlying
progressive
dominance
Pf+
unclear.
In
particular,
it
is
unknown
whether
phage
commonly
occurs
horizontally
between
bacteria
within
airway
via
viral
particles
or
if
mostly
acquired
new
infections.
Here,
we
studied
genomic
sequences
from
3
patient
cohorts
totaling
663
clinical
isolates
105
pwCF.
We
identify
analyze
patients
genetically
similar
groups
called
"clone
types".
find
predominantly
passed
down
vertically
lineages
rarely
horizontal
transfer
clone
types
airway.
Conversely,
extensive
evidence
superinfection
by
a
new,
distinct
Pf+.
Finally,
show
reduced
activity
type
IV
pilus
susceptibility
vitro.
These
results
cast
light
on
virulence-associated
phages
setting.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Фев. 15, 2025
Abstract
The
role
of
mutation
rate
in
evolutionary
rescue
has
been
extensively
explored,
but
little
work
investigated
how
can
promote
mutators,
lineages
with
higher
rates.
We
investigate
the
likelihood
on
a
mutator
background
that
either
emerges
de
novo
or
pre-exists
population
prior
to
severe
environmental
change.
If
such
an
event
occurs,
lineage
sweeps
into
population,
and
thus
stress
promoted
mutators.
Our
findings
indicate
evolution
substantially
boost
probabilities,
stronger
mutators
are
most
effective
when
wildtype
low
rate,
while
their
advantage
diminishes
for
Interestingly,
at
intermediate
rates,
emerging
be
almost
equally
likely
sweep
no
matter
slowly
quickly
environment
changes.
However,
only
very
slow
changes
due
sequential
nature
necessary
mutations
occur.
Finally,
we
show
pre-existing
significantly
more
compared
wildtype,
provided
wildtype’s
is
relatively
low.
This
research
opens
new
avenues
investigating
dynamics
response
stress.
ABSTRACT
Pseudomonas
aeruginosa
routinely
causes
chronic
lung
infection
in
individuals
with
muco-obstructive
airway
diseases
(MADs).
In
MADs,
P.
forms
antibiotic-tolerant
biofilm-like
aggregates
within
hyperconcentrated
mucus.
While
the
contribution
of
mucin
hyper-concentration
to
antibiotic
tolerance
and
bacterial
aggregation
has
been
described,
less
is
known
about
factors
involved.
We
previously
found
that
populations
isolated
from
people
MADs
exhibited
significant
variability
tolerance.
This
not
explained
by
resistance
or
mucus
environment,
suggesting
bacterial-driven
mechanisms
play
a
crucial
role
treatment
outcomes.
Here,
we
investigated
flagellar
motility
aggregate
formation
manipulating
behaviors.
Similar
prior
studies,
loss
resulted
increased
various
antibiotics.
identified
novel
differential
roles
MotAB
MotCD
stators,
which
power
rotation,
antimicrobial
formation.
addition,
control
fliC
expression
was
important
for
Constitutive
allowed
overcome
entropic
forces
mucin,
antagonizing
increasing
efficacy.
Lastly,
demonstrate
neutrophil
elastase,
an
abundant
protease
infection,
promotes
failure
impairing
leading
These
results
underscore
tolerance,
enhancing
our
understanding
how
adapts
environment
.
IMPORTANCE
Antibiotic
key
driver
mortality
The
contribute
MADS
are
poorly
understood.
impact
swimming
behaviors
on
context
diseased
environment.
Loss
motility,
common
adaptation
drives
promoting
under
physiologically
relevant
concentrations.
uncovered
stators
Furthermore,
host-derived
protease,
motility.
further
airway,
revealing
potential
new
targets
improve
infection.
Microbiology Spectrum,
Год журнала:
2024,
Номер
12(7)
Опубликована: Июнь 11, 2024
Pseudomonas
aeruginosa
is
a
ubiquitous,
opportunistic
human
pathogen.
Since
it
often
expresses
multidrug
resistance,
new
treatment
options
are
urgently
required.
Such
treatments
usually
assessed
with
one
of
the
canonical
laboratory
strains,
PAO1
or
PA14.
However,
these
two
strains
unlikely
representative
infecting
patients,
because
they
have
adapted
to
conditions
and
do
not
capture
enormous
genomic
diversity
species.
Here,
we
characterized
major
P.
clone
type
(mPact)
panel.
This
panel
consists
20
which
reflect
species'
diversity,
cover
all
types,
both
patient
environmental
origins.
We
found
significant
strain
variation
in
distinct
responses
toward
antibiotics
general
growth
characteristics.
Only
few
measured
traits
related,
suggesting
independent
trait
optimization
across
strains.
High
resistance
levels
were
only
identified
for
clinical
mPact
isolates
could
be
linked
known
antimicrobial
(AMR)
genes.
One
strain,
H01,
produced
highly
unstable
AMR
combined
reduced
under
drug-free
conditions,
indicating
an
evolutionary
cost
resistance.
The
expression
microcolonies
was
common
among
especially
H15,
also
showed
growth,
possibly
another
trade-off.
By
linking
isolation
source,
virulence
life
history
traits,
further
specific
adaptive
strategies
individual
either
host
processes
degradation
pathways.
Overall,
provides
reasonably
sized
set
enabling
in-depth
analysis
designs
dynamics
consideration
diversity.
New
needed
high-risk
pathogens
such
as
multidrug-resistant
pathogen
aeruginosa.
characterize
It
different
origins
that
types
species
well
its
shows
(i)
against
antibiotics,
including
several
last
resort
antibiotics;
(ii)
related
associated
response
(iii)
developed
novel
approach
integrates
information
on
virulence,
life-history
characteristics,
allowing
us
demonstrate
presence
focus
interaction
resource
processing.
In
conclusion,
manageable
number
this
important
analyses
dynamics.