Aquaculture and Fisheries,
Год журнала:
2020,
Номер
5(4), С. 163 - 173
Опубликована: Июнь 20, 2020
Capture
fisheries
and
aquaculture
provide
a
significant
amount
of
high-quality
protein
to
human
beings
thus
play
an
essential
role
in
ending
global
hunger
malnutrition.
The
availability
tens
hundreds
fish
genomes
the
advances
genomics
have
allowed
addressing
many
challenging
issues
such
as
overfishing
germplasm
degradation
faced
by
aquaculture.
In
this
review,
we
describe
current
status
aquaculture,
with
emphasis
on
14
species
that
are
considerably
important
context
genome
sequencing
assembly,
annotation,
GC
contents,
repeats.
majority
these
assembled
at
chromosome
level
annotated
proteins
pathways,
functional
relevance
environmental
adaptation
phenotypic
variation.
We
summarize
potential
genomic
applications
related
assessment
use
genetic
resources,
disease
resistance,
growth
development,
sexual
determination,
management.
Although
much
progress
has
been
achieved
application
full
remains
be
explored
reaped.
discuss
challenges
perspectives
translational
fisheries,
which
include
assembly
selection
breeding,
management,
integrated
artificial
intelligence
systems.
coming
decades,
anticipate
techniques
editing
selection,
along
emerging
systems,
will
contribute
significantly
improvements
farmed
sustainable
exploitation
fishery
consequently
lead
eradicating
poverty
2030,
ambitious
goal
set
United
Nations.
Fisheries Science,
Год журнала:
2019,
Номер
85(3), С. 429 - 437
Опубликована: Март 20, 2019
Surrogate
broodstock
technology
facilitates
the
production
of
donor-derived
gametes
in
surrogates,
and
comprises
transplanting
germ
cells
a
donor
into
recipients
different
strain
or
species.
The
following
applications
this
are
expected
field
aquaculture:
(1)
efficient
reliable
offspring
carrying
superior
genetic
traits
by
from
single
selected
fish
with
many
recipient
fish;
(2)
reduction
time
required
to
breed
using
species
short
generation
produce
long
time;
(3)
long-term
storage
valuable
strains
as
resources
cryopreserving
for
transplantation;
(4)
mass
genetically
sterile
that
is
due
mutation
somatic
normal
without
mutation.
It
combination
these
techniques
will
greatly
accelerate
breeding
aquaculture
important
adapt
surrogate
wider
range
fishery
further
improve
efficiency
gamete
when
broodstock.
Aquaculture Reports,
Год журнала:
2021,
Номер
20, С. 100700 - 100700
Опубликована: Май 7, 2021
Selective
breeding
has
been
successfully
applied
to
improve
profitability
and
sustainability
in
numerous
aquatic
species.
Recent
developments
of
high
throughput
genotyping
technology
now
enable
the
implementation
genomic
selection,
a
method
aiming
predict
value
candidates
based
on
their
genotype
at
genome-wide
markers.
In
this
review
article,
we
state
arts,
challenges
prospects
for
application
selection
aquaculture
The
particular
focus
is
status
several
major
species
International
Council
Exploration
Sea
(ICES)
member
countries:
Atlantic
salmon,
rainbow
trout,
cod,
American
catfish,
Pacific
oyster,
European
sea
bass
gilthead
bream.
While
potential
clear,
tailored
species-specific
applications
will
be
needed
maximise
its
benefit
sector.
Reviews in Aquaculture,
Год журнала:
2020,
Номер
12(4), С. 2559 - 2572
Опубликована: Июнь 19, 2020
Abstract
Bivalve
molluscs
are
very
nutritious
and
an
important
source
of
human
animal
protein.
To
date,
bivalve
farming
has
contributed
to
about
15%
the
mean
per
capita
protein
intake
approximate
1.5
billion
people
around
world.
Unfortunately,
effects
climate
change,
mainly
global
warming
ocean
acidification,
have
had
many
deleterious
on
aquaculture,
not
only
leading
mass
mortalities
bivalves
in
farms
hatcheries,
but
also
causing
collapse
natural
populations.
In
response
recurrent
farmed
bivalves,
selective
breeding
programmes
been
launched
with
goal
reducing
mortality
rate
caused
by
disease
outbreaks
changing
conditions.
This
article
reviews
progress
potential
edible
context
change.
It
is
clear
from
literature
that
terms
environmental
sensitivity,
resistance
tolerance,
great
for
improving
robustness
significant
heritability
genetic
gain.
Because
change
a
complex
trait
affected
multiple
genes,
application
modern
genomic
tools
expected
dramatically
enhance
accuracy
efficacy
improvements
produce
strains
robust
The
information
this
useful
guidance
adaptation
strategies
climate‐smart
aquaculture
solutions
be
implemented
hatcheries
farms.
Nature Communications,
Год журнала:
2021,
Номер
12(1)
Опубликована: Апрель 22, 2021
The
infraorder
Brachyura
(true
or
short-tailed
crabs)
represents
a
successful
group
of
marine
invertebrates
yet
with
limited
genomic
resources.
Here
we
report
chromosome-anchored
reference
genome
and
transcriptomes
the
Chinese
mitten
crab
Eriocheir
sinensis,
catadromous
invasive
species
wide
environmental
tolerance,
strong
osmoregulatory
capacity
high
fertility.
We
show
expansion
specific
gene
families
in
crab,
including
F-ATPase,
which
enhances
our
knowledge
on
adaptive
plasticity
this
species.
Our
analysis
spatio-temporal
E.
sinensis
other
decapods
shows
that
brachyurization
development
is
associated
down-regulation
Hox
genes
at
megalopa
stage
when
tail
shortening
occurs.
A
better
understanding
molecular
mechanism
regulating
sexual
achieved
by
integrated
multiple
omics.
These
resources
significantly
expand
repertoire
Brachyura,
provide
insights
into
biology
group,
Crustacea
general.
Reviews in Aquaculture,
Год журнала:
2021,
Номер
13(4), С. 2344 - 2363
Опубликована: Май 26, 2021
Abstract
Novel
genome
editing
techniques
allow
for
efficient
and
targeted
improvement
of
aquaculture
stock
might
be
a
solution
to
solve
challenges
related
disease
environmental
impacts.
This
review
has
retrieved
the
latest
research
on
aquacultured
finfish
species,
exploring
technological
progress
scope.
Genome
most
often
been
used
Nile
tilapia
(
Oreochromis
niloticus
Linnaeus),
followed
by
Atlantic
salmon
(Salmo
salar
Linnaeus).
More
than
half
studies
have
focused
developing
solutions
challenges,
while
rest
can
characterized
as
basic
fish
genetics/physiology
or
technology
development.
Main
traits
researched
are
reproduction
development,
growth,
pigmentation,
resistance,
use
trans‐GFP
study
omega‐3
metabolism,
respectively.
There
is
certain
correlation
between
species
identified
their
commercial
relevance,
indicating
relevance
present
aquaculture.
Reviewing
geographical
origin
research,
China
in
forefront
(29
publications),
United
States
(9)
Norway
(7).
The
seems
not
dependent
regulative
conditions
respective
countries,
but
merely
purpose
objectives
technologies.
Some
technical
barriers
presented
together
with
overcome
these‐off‐target
effects,
ancestral
duplication
mosaicism
F0.
One
contribution
more
sustainable
aquaculture,
where
prominent
issues
that
contribute
minimizing
impact
biodiversity.
Frontiers in Genetics,
Год журнала:
2022,
Номер
13
Опубликована: Ноя. 2, 2022
Major
progress
has
been
made
with
genomic
and
genetic
studies
in
aquaculture
the
last
decade.
However,
research
on
epigenetic
regulation
of
traits
is
still
at
an
early
stage.
It
apparent
that
most,
if
not
all,
are
regulated
both
levels.
This
paper
reviews
recent
understanding
important
such
as
growth,
reproduction,
disease
resistance,
stress
responses.
Although
it
challenging
to
make
generalized
statements,
DNA
methylation
mostly
correlated
down-regulation
gene
expression,
especially
when
promoters
enhancers.
As
such,
growth
factors
their
receptors
negatively
growth;
hypomethylation
genes
for
tolerance
increased
tolerance;
male
or
female
sex
differentiation
leads
into
males
females,
respectively.
environmental
mediated
level
regulation,
environment-induced
changes
appeared
be
intergenerationally
inherited,
but
evidences
transgenerational
inheritance
limited.
Reviews in Aquaculture,
Год журнала:
2023,
Номер
15(4), С. 1501 - 1521
Опубликована: Янв. 23, 2023
Abstract
Genomic
resources
are
increasingly
being
used
to
improve
the
production
efficiency
and
profitability
of
aquaculture.
Crustaceans
a
large
group
invertebrates
that
encompasses
some
most
important
farmed
species
in
aquaculture
industry.
However,
very
few
crustacean
genomes
have
been
published
although
an
genome
project
was
proposed
as
early
1997.
Breakthroughs
next‐generation
third‐generation
sequencing
technologies
development
high‐complexity
sequence
assembly
strategies
promoted
publication
increasing
number
genomes,
thus
paving
broad
way
for
biological
genetic
studies
applications
In
this
review,
we
summarize
recent
advances
genomic
research
June
2022,
including
assembly,
characteristics,
mechanisms
underlying
various
phenotypes,
such
environmental
adaptation,
lifestyle,
development,
sex
determination.
This
review
also
discusses
application
aquaculture,
dissection
economic
traits
genome‐based
selective
breeding
via
genome‐wide
association
selection.
High‐quality
not
only
understanding
basis
biologically
economically
but
improvement
species.
utilization
genomics
still
lags
far
behind
those
other
animals.
Therefore,
additional
multi‐omics
technological
needed
accelerate
