Mining microbes for mental health: Determining the role of microbial metabolic pathways in human brain health and disease DOI Creative Commons
Simon Spichak, Thomaz F. S. Bastiaanssen,

Kirsten Berding

и другие.

Neuroscience & Biobehavioral Reviews, Год журнала: 2021, Номер 125, С. 698 - 761

Опубликована: Март 5, 2021

There is increasing knowledge regarding the role of microbiome in modulating brain and behaviour. Indeed, actions microbial metabolites are key for appropriate gut-brain communication humans. Among these metabolites, short-chain fatty acids, tryptophan, bile acid metabolites/pathways show strong preclinical evidence involvement various aspects function With identification neuroactive modules, new predictive tools can be applied to existing datasets. We identified 278 studies relating human microbiota-gut-brain axis which included sequencing data. This spanned across psychiatric neurological disorders with a small number also focused on normal behavioural development. consistent bioinformatics pipeline, thirty-five datasets were reanalysed from publicly available raw files remainder summarised collated. studies, we uncovered disease-related alterations metabolic pathways Alzheimer's Disease, schizophrenia, anxiety depression. Amongst that could not reanalysed, many technical limitations hindered discovery specific biomarkers microbes or conserved studies. Future warranted confirm our findings. propose guidelines future analysis increase reproducibility consistency within field.

Язык: Английский

Microbiota in health and diseases DOI Creative Commons
Kejun Hou,

Zhuo‐Xun Wu,

Xuan-Yu Chen

и другие.

Signal Transduction and Targeted Therapy, Год журнала: 2022, Номер 7(1)

Опубликована: Апрель 23, 2022

Abstract The role of microbiota in health and diseases is being highlighted by numerous studies since its discovery. Depending on the localized regions, can be classified into gut, oral, respiratory, skin microbiota. microbial communities are symbiosis with host, contributing to homeostasis regulating immune function. However, dysbiosis lead dysregulation bodily functions including cardiovascular (CVDs), cancers, respiratory diseases, etc. In this review, we discuss current knowledge how links host or pathogenesis. We first summarize research healthy conditions, gut-brain axis, colonization resistance modulation. Then, highlight pathogenesis disease development progression, primarily associated community composition, modulation response, induction chronic inflammation. Finally, introduce clinical approaches that utilize for treatment, such as fecal transplantation.

Язык: Английский

Процитировано

1557

The functionality of probiotics in aquaculture: An overview DOI
Mohamed T. El‐Saadony, Mahmoud Alagawany, Amlan Kumar Patra

и другие.

Fish & Shellfish Immunology, Год журнала: 2021, Номер 117, С. 36 - 52

Опубликована: Июль 15, 2021

Язык: Английский

Процитировано

417

Defining and quantifying the core microbiome: Challenges and prospects DOI Open Access
Alexander T. Neu, Eric E. Allen, Kaustuv Roy

и другие.

Proceedings of the National Academy of Sciences, Год журнала: 2021, Номер 118(51)

Опубликована: Дек. 3, 2021

The term "core microbiome" has become widely used in microbial ecology over the last decade. Broadly, core microbiome refers to any set of taxa, or genomic and functional attributes associated with those that are characteristic a host environment interest. Most commonly, microbiomes measured as taxa shared among two more samples from particular environment. Despite popularity this its growing use, there is little consensus about how should be quantified practice. Here, we present brief history concept use representative sample literature review different metrics commonly for quantifying core. Empirical analyses have wide range microbiome, including arbitrary occurrence abundance cutoff values, focal taxonomic level ranging phyla amplicon sequence variants. However, many these susceptible sampling other biases. Developing standardized accounts such biases necessary testing specific hypotheses ecological roles microbiomes.

Язык: Английский

Процитировано

349

Bacterial seed endophyte shapes disease resistance in rice DOI
Haruna Matsumoto, Xiaoyan Fan, Yue Wang

и другие.

Nature Plants, Год журнала: 2021, Номер 7(1), С. 60 - 72

Опубликована: Янв. 4, 2021

Язык: Английский

Процитировано

314

The microbiome and gut homeostasis DOI
Jee‐Yon Lee, Renée M. Tsolis, Andreas J. Bäumler

и другие.

Science, Год журнала: 2022, Номер 377(6601)

Опубликована: Июнь 30, 2022

Changes in the composition of gut microbiota are associated with many human diseases. So far, however, we have failed to define homeostasis or dysbiosis by presence absence specific microbial species. The and function adult is governed diet host factors that regulate direct growth. delivers oxygen nitrate lumen small intestine, which selects for bacteria use respiration energy production. In colon, contrast, limits availability nitrate, results a bacterial community specializes fermentation Although influences composition, poor weakens control mechanisms microbiota. Hence, quantifying parameters growth could help offer alternative strategies remediate dysbiosis.

Язык: Английский

Процитировано

272

Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies DOI
Katherine M. Kennedy, Marcus C. de Goffau, María Elisa Pérez-Muñoz

и другие.

Nature, Год журнала: 2023, Номер 613(7945), С. 639 - 649

Опубликована: Янв. 25, 2023

Язык: Английский

Процитировано

231

Plant Growth Stimulation by Microbial Consortia DOI Creative Commons
Gustavo Santoyo, Paulina Guzmán-Guzmán, Fannie Isela Parra-Cota

и другие.

Agronomy, Год журнала: 2021, Номер 11(2), С. 219 - 219

Опубликована: Янв. 24, 2021

Plant-associated microorganisms play an important role in agricultural production. Although various studies have shown that single can exert beneficial effects on plants, it is increasingly evident when a microbial consortium—two or more interacting microorganisms—is involved, additive synergistic results be expected. This occurs, part, due to the fact multiple species perform variety of tasks ecosystem like rhizosphere. Therefore, mechanisms plant growth stimulation (i.e., enhanced nutrient availability, phytohormone modulation, biocontrol, biotic and abiotic stress tolerance) exerted by different players within rhizosphere, such as plant-growth-promoting bacteria (PGPB) fungi (such Trichoderma Mycorrhizae), are reviewed. In addition, their interaction activity highlighted they act part consortium, mainly mixtures PGPB, PGPB–Mycorrhizae, PGPB–Trichoderma, under normal diverse conditions. Finally, we propose expansion use consortia, well increase research facilitate best most consistent field.

Язык: Английский

Процитировано

227

Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease DOI Creative Commons
Ben Niu,

Weixiong Wang,

Zhibo Yuan

и другие.

Frontiers in Microbiology, Год журнала: 2020, Номер 11

Опубликована: Окт. 9, 2020

Major losses of crop yield and quality caused by soil-borne plant diseases have long threatened the ecology economy agriculture forestry. Biological control using beneficial microorganisms has become more popular for management pathogens as an environmentally friendly method protecting plants. Two major barriers limiting disease-suppressive function biocontrol microbes are inadequate colonization hosts inefficient inhibition pathogen growth, due to biotic abiotic factors acting in complex rhizosphere environments. Use a consortium microbial strains with disease inhibitory activity may improve efficacy disease-inhibiting microbes. The mechanisms biological not fully understood. In this review, we focus on bacterial fungal agents summarize current state use single strain multi-strain consortia diseases. We discuss potential used components suppressing efficacy. emphasize interaction-related be considered when constructing multiple-strain propose workflow assembling them applying reductionist synthetic community approach.

Язык: Английский

Процитировано

203

Polyamines in cancer: integrating organismal metabolism and antitumour immunity DOI
Cassandra E. Holbert,

Michael Cullen,

Robert A. Casero

и другие.

Nature reviews. Cancer, Год журнала: 2022, Номер 22(8), С. 467 - 480

Опубликована: Апрель 27, 2022

Язык: Английский

Процитировано

197

Microbiome and Human Health: Current Understanding, Engineering, and Enabling Technologies DOI Creative Commons
Nikhil Aggarwal, Shohei Kitano,

Ginette Ru Ying Puah

и другие.

Chemical Reviews, Год журнала: 2022, Номер 123(1), С. 31 - 72

Опубликована: Ноя. 1, 2022

The human microbiome is composed of a collection dynamic microbial communities that inhabit various anatomical locations in the body. Accordingly, coevolution with host has resulted these playing profound role promoting health. Consequently, perturbations can cause or exacerbate several diseases. In this Review, we present our current understanding relationship between health and disease development, focusing on microbiomes found across digestive, respiratory, urinary, reproductive systems as well skin. We further discuss strategies by which composition function be modulated to exert therapeutic effect host. Finally, examine technologies such multiomics approaches cellular reprogramming microbes enable significant advancements research engineering.

Язык: Английский

Процитировано

197