Using
a
database
of
open
data
policies
for
199
journals
in
ecology
and
evolution,
we
found
no
detectable
link
between
sharing
requirements
article
retractions
or
corrections.
Despite
the
potential
to
facilitate
error
detection,
poorly
archived
datasets,
absence
code,
stigma
associated
with
correcting
retracting
articles
likely
stymie
correction.
Requiring
code
alongside
destigmatizing
correction
among
authors
journal
editors
could
increase
effectiveness
at
helping
science
self-correct.
BMJ,
Год журнала:
2023,
Номер
unknown, С. e075767 - e075767
Опубликована: Июль 11, 2023
To
synthesise
research
investigating
data
and
code
sharing
in
medicine
health
to
establish
an
accurate
representation
of
the
prevalence
sharing,
how
this
frequency
has
changed
over
time,
what
factors
influence
availability.
Frontiers in Environmental Science,
Год журнала:
2022,
Номер
10
Опубликована: Июнь 30, 2022
The
rapid
growth
in
microplastic
pollution
research
is
influencing
funding
priorities,
environmental
policy,
and
public
perceptions
of
risks
to
water
quality
human
health.
Ensuring
that
microplastics
data
are
findable,
accessible,
interoperable,
reusable
(FAIR)
essential
inform
policy
mitigation
strategies.
We
present
a
bibliographic
analysis
sharing
practices
the
community,
highlighting
state
openness
data.
A
stratified
(by
year)
random
subset
785
6,608
articles
indexed
Web
Science
indicates
that,
since
2006,
less
than
third
(28.5%)
contained
statement.
These
statements
further
show
most
often,
were
provided
articles’
supplementary
material
(38.8%)
only
13.8%
via
repository.
Of
279
datasets
found
online
repositories,
20.4%
presented
metadata
with
access
requiring
additional
approval.
Although
increasing,
rate
still
lags
behind
publication
peer-reviewed
on
microplastics.
About
quarter
repository
originated
from
North
America
(12.8%)
Europe
(13.4%).
Marine
estuarine
environments
frequently
sampled
systems
(26.2%);
sediments
(18.8%)
(15.3%)
predominant
media.
available
15.4%
18.2%
do
not
have
adequate
determine
sampling
location
media
type,
respectively.
discuss
five
recommendations
strengthen
community.
Journal of Experimental Biology,
Год журнала:
2024,
Номер
227(4)
Опубликована: Фев. 15, 2024
Declining
body
size
in
fishes
and
other
aquatic
ectotherms
associated
with
anthropogenic
climate
warming
has
significant
implications
for
future
fisheries
yields,
stock
assessments
ecosystem
stability.
One
proposed
mechanism
seeking
to
explain
such
body-size
reductions,
known
as
the
gill
oxygen
limitation
(GOL)
hypothesis,
recently
been
used
model
impacts
of
on
but
not
robustly
empirically
tested.
We
brook
trout
(Salvelinus
fontinalis),
a
fast-growing,
cold-water
salmonid
species
broad
economic,
conservation
ecological
value,
examine
GOL
hypothesis
long-term
experiment
quantifying
effects
temperature
growth,
resting
metabolic
rate
(RMR),
maximum
(MMR)
surface
area
(GSA).
Despite
significantly
reduced
growth
at
an
elevated
temperature,
allometric
slopes
GSA
were
different
than
1.0
above
those
RMR
MMR
both
treatments
(15°C
20°C),
contrary
expectations.
also
found
that
effect
was
time-dependent,
contradicting
prediction
heightened
temperatures
increase
rates
reinforcing
importance
longer-term
exposures
(e.g.
>6
months)
fully
understand
influence
acclimation
temperature-metabolic
relationships.
Our
results
indicate
although
may
be
important
some
aspects
temperature-body
relationships
constraints
supply
contribute
cases,
it
is
unlikely
universal
explaining
ectotherms.
suggest
research
focus
alternative
mechanisms
underlying
relationships,
projections
change
yields
using
models
based
assumptions
interpreted
caution.
Proceedings of the Royal Society B Biological Sciences,
Год журнала:
2022,
Номер
289(1975)
Опубликована: Май 18, 2022
Many
leading
journals
in
ecology
and
evolution
now
mandate
open
data
upon
publication.
Yet,
there
is
very
little
oversight
to
ensure
the
completeness
reusability
of
archived
datasets,
we
currently
have
a
poor
understanding
factors
associated
with
high-quality
sharing.
We
assessed
362
datasets
linked
first-
or
senior-authored
papers
published
by
100
principal
investigators
(PIs)
fields
over
period
7
years
identify
predictors
(data
archiving
quality).
Datasets
scored
low
on
these
metrics:
56.4%
were
complete
45.9%
reusable.
Data
reusability,
but
not
completeness,
was
slightly
higher
for
more
recently
PIs
less
seniority.
Journal
policy,
PI
gender
corresponding
author
status
unrelated
quality.
However,
identity
explained
large
proportion
variance
(27.8%)
(22.0%),
indicating
consistent
inter-individual
differences
sharing
practices
across
time
contexts.
Several
consistently
shared
either
high
quality,
most
inconsistent
how
well
they
shared.
One
explanation
intra-individual
variation
observed
that
often
conduct
research
through
students
postdoctoral
researchers,
who
may
be
responsible
collection,
curation
archiving.
Levels
literacy
vary
among
trainees
regularly
perform
quality
control
files.
Our
findings
suggest
management
training
culture
within
PI's
group
are
likely
important
determinants
than
other
such
as
journal's
policy.
Greater
incentives
individual
researchers
at
all
career
stages
could
improve
enhance
transparency
reusability.
Functional Ecology,
Год журнала:
2024,
Номер
38(4), С. 755 - 764
Опубликована: Янв. 21, 2024
Abstract
Climate
warming
is
driving
the
maximum
attainable
size
of
many
fish
species
to
decrease,
yet
mechanisms
underlying
this
‘shrinking’
phenomenon
are
not
well
understood.
The
gill
oxygen
limitation
(GOL)
hypothesis
perhaps
most
prominent
mechanistic
proposition,
asserting
that,
as
grow,
two‐dimensional
surface
area
(GSA)
progressively
fails
supply
enough
support
continued
growth
three‐dimensional
body—a
process
exacerbated
by
increased
metabolism
associated
with
warming.
However,
these
ideas
have
been
hotly
debated
owing
limited
empirical
understanding
how
GSA
develops
respect
a
fish's
body
mass
and
requirements.
For
first
time,
we
addressed
knowledge
gap
rearing
Galaxias
maculatus
for
5
months
at
normal
(15°C)
elevated
(20°C)
summer
temperatures,
(hyperoxia)
or
without
(normoxia)
supplementary
oxygen.
Quantifying
individual
metabolic
rate
traits
across
sizes
encompassing
species'
ontogeny,
found
little
evidence
change
in
proportion
available
per
unit
(termed
S
metric)
no
improvements
under
hyperoxia.
Importantly,
temperature
where
should
be
pronounced,
metric
did
either
treatment
(allometric
exponents
were
different
from
0).
These
results
indicate
that
gills
can
grow
ways
an
individual's
requirements,
contrasting
suggestion
reductions
response
climate
driven
insurmountable
geometric
constraint
gills.
Read
free
Plain
Language
Summary
article
on
Journal
blog.
Proceedings of the Royal Society B Biological Sciences,
Год журнала:
2022,
Номер
289(1979)
Опубликована: Июль 20, 2022
Historical
and
long-term
environmental
datasets
are
imperative
to
understanding
how
natural
systems
respond
our
changing
world.
Although
immensely
valuable,
these
data
at
risk
of
being
lost
unless
actively
curated
archived
in
repositories.
The
practice
rescue,
which
we
define
as
identifying,
preserving,
sharing
valuable
associated
metadata
loss,
is
an
important
means
ensuring
the
viability
accessibility
such
datasets.
Improvements
policies
best
practices
around
management
will
hopefully
limit
future
need
for
rescue;
changes,
however,
do
not
apply
retroactively.
While
rescuing
new,
term
lacks
formal
definition,
often
conflated
with
other
terms
(i.e.
reuse),
general
recommendations.
Here,
outline
seven
key
guidelines
effective
rescue
historically
collected
unmanaged
We
discuss
prioritization
forming
teams,
preparing
metadata,
archiving
rescued
materials.
In
era
rapid
change,
policy
solutions
require
evidence
from
both
contemporary
historical
sources.
It
is,
therefore,
that
identify
preserve
at-risk
before
they
science.
Journal of Fish Biology,
Год журнала:
2023,
Номер
103(4), С. 765 - 772
Опубликована: Янв. 17, 2023
Abstract
The
effects
of
increased
levels
carbon
dioxide
(CO
2
)
on
the
Earth's
temperature
have
been
known
since
end
19th
century.
It
was
long
believed
that
oceans'
buffering
capacity
would
counteract
any
dissolved
CO
in
marine
environments,
but
during
recent
decades,
many
studies
reported
detrimental
ocean
acidification
aquatic
organisms.
most
prominent
can
be
found
within
field
behavioural
ecology,
e.g
.,
complete
reversal
predator
avoidance
behaviour
‐exposed
coral
reef
fish.
Some
very
influential,
receiving
hundreds
citations
over
years.
results
also
conveyed
to
policymakers
and
publicized
media
outlets
for
general
public.
Those
extreme
fish
have,
however,
spurred
controversy,
given
more
than
a
century
research
suggests
there
are
few
or
no
negative
elevated
physiology.
This
is
due
sophisticated
acid–base
regulatory
mechanisms
should
enable
their
resilience
near‐future
increases
.
In
addition,
an
“decline
effect”
has
recently
shown
literature
regarding
behaviour,
independent
groups
unable
replicate
some
profound
effects.
Here,
author
presents
brief
historical
overview
fishes.
recap
warranted
because
earlier
work,
prior
(
c.
10
year)
explosion
interest,
often
overlooked
today's
studies,
despite
its
value
field.
Based
data
current
knowledge
status,
future
strategies
with
aim
improve
rigour
clarify
understanding
Fish and Fisheries,
Год журнала:
2023,
Номер
24(5), С. 730 - 743
Опубликована: Май 18, 2023
Abstract
Life
history
theory
suggests
that
maximum
size
and
growth
evolve
to
maximize
fitness.
In
contrast,
the
Gill
Oxygen
Limitation
Theory
(GOLT)
in
fishes
other
aquatic,
water‐breathing
organisms
is
constrained
by
body
mass‐scaling
of
gill
surface
area.
Here,
we
use
new
data
a
novel
phylogenetic
Bayesian
multilevel
modelling
framework
test
this
idea
asking
three
questions
posed
GOLT
regarding
size,
gills.
Across
fishes,
ask
whether
area
explains
(1)
variation
von
Bertalanffy
coefficient
(
k
)
above
beyond
explained
asymptomatic
W
∞
),
(2)
performance
(a
trait
integrates
tradeoff
between
(3)
more
compared
activity
(as
approximated
caudal
fin
aspect
ratio).
Overall,
find
there
only
weak
relationship
among
across
species.
Indeed,
does
not
explain
much
(especially
for
those
species
reach
same
or
performance.
Activity
five
times
Our
results
suggest
factor
growth,
covariates
(e.g.
activity)
are
likely
important
understanding
how
life
traits
vary