Cells,
Год журнала:
2023,
Номер
12(24), С. 2860 - 2860
Опубликована: Дек. 18, 2023
Advances
in
stem
cell
technologies
open
up
new
avenues
for
modelling
development
and
diseases.
The
success
of
these
pursuits,
however,
relies
on
the
use
cells
most
relevant
to
those
targeted
by
disease
interest,
example,
midbrain
dopaminergic
neurons
Parkinson’s
disease.
In
present
study,
we
report
generation
a
human
induced
pluripotent
(iPSC)
line
capable
purifying
tracing
nascent
progenitors
their
differentiated
progeny
via
expression
Blue
Fluorescent
Protein
(BFP).
This
was
achieved
CRISPR/Cas9-assisted
knock-in
BFP
Cre
into
safe
harbour
locus
AAVS1
an
early
lineage
marker
gene
LMX1A,
respectively.
Immunocytochemical
analysis
single-cell
RNA
sequencing
iPSC-derived
neural
cultures
confirm
developmental
recapitulation
fetal
high-quality
cells.
By
disease-related
drug
toxicity
using
1-Methyl-4-phenylpyridinium
(MPP+),
showed
preferential
reduction
BFP+
cells,
finding
demonstrated
independently
death
assays
transcriptomic
MPP+
treated
cultures.
Together,
results
highlight
importance
disease-relevant
types
modelling.
Abstract
It
is
long
been
suggested
that
one‐carbon
metabolism
(OCM)
associated
with
Alzheimer's
disease
(AD),
whereas
the
potential
mechanisms
remain
poorly
understood.
Taking
advantage
of
chemical
biology,
mitochondrial
serine
hydroxymethyltransferase
(SHMT2)
directly
regulated
translation
ADAM
metallopeptidase
domain
10
(ADAM10),
a
therapeutic
target
for
AD
reported.
That
small‐molecule
kenpaullone
(KEN)
promoted
ADAM10
via
5′
untranslated
region
(5′UTR)
and
improved
cognitive
functions
in
APP/PS1
mice
found.
SHMT2,
which
identified
as
gene
KEN
5′UTR‐interacting
RNA
binding
protein
(RBP),
mediated
KEN‐induced
vitro
vivo.
SHMT2
controls
signaling
pathways
through
to
large
number
RNAs
enhances
5′UTR
activity
by
direct
interaction
GAGGG
motif,
this
motif
affected
ribosomal
scanning
eukaryotic
initiation
factor
2
(eIF2)
5′UTR.
Together,
exhibits
linking
OCM
processing,
metabolic
enzyme
“moonlighted”
RBP
promoting
5′UTR‐dependent
initiation.
Scientific Reports,
Год журнала:
2024,
Номер
14(1)
Опубликована: Янв. 11, 2024
Folate
receptor
(FR)
alpha
(FOLR1)
and
beta
(FOLR2)
are
membrane-anchored
folate
transporters
that
expressed
at
low
levels
in
normal
tissues,
while
their
expression
is
strongly
increased
several
cancers.
Intriguingly,
although
the
function
of
these
receptors
in,
for
example,
development
cancer
has
been
studied
intensively,
role
aging
still
unknown.
To
address
this,
we
utilized
Caenorhabditis
elegans,
which
FOLR-1
sole
ortholog
receptors.
We
found
loss
does
not
affect
reproduction,
physical
condition,
proteostasis
or
lifespan,
indicating
it
required
transport
to
maintain
health.
Interestingly,
detectably
only
uterine-vulval
cells,
histone-binding
protein
LIN-53
inhibits
its
other
tissues.
Furthermore,
whereas
knockdown
lin-53
known
shorten
partially
rescues
this
phenotype,
suggesting
elevated
folr-1
detrimental
Indeed,
our
data
demonstrate
overexpression
toxic,
phenotype
dependent
on
diet.
Altogether,
work
could
serve
as
a
basis
further
studies
elucidate
organismal
effects
abnormal
FR
diseases
such
cancer.
Cellular
metabolism
plays
an
essential
role
in
the
regrowth
and
regeneration
of
a
neuron
following
physical
injury.
Yet,
our
knowledge
specific
metabolic
pathways
that
are
beneficial
to
remains
sparse.
Previously,
we
have
shown
modulation
O-linked
β-N-acetylglucosamine
(O-GlcNAc)
signaling,
ubiquitous
post-translational
modification
acts
as
cellular
nutrient
sensor,
can
significantly
enhance
vivo
regeneration.
Here,
define
pathway
by
which
O-GlcNAc
transferase
(
ogt-1
)
loss
function
mediates
increased
regenerative
outgrowth.
Performing
laser
axotomy
measuring
subsequent
individual
neurons
C.
elegans
,
find
glycolysis,
serine
synthesis
(SSP),
one-carbon
(OCM),
downstream
transsulfuration
(TSP)
all
this
process.
The
effects
mutation
abrogated
genetic
and/or
pharmacological
disruption
OCM
SSP
linking
glycolysis.
Testing
branches
pathway,
enhanced
is
dependent
only
on
vitamin
B12
independent
shunt
pathway.
These
results
further
supported
RNA
sequencing
reveals
dramatic
transcriptional
changes
mutation,
genes
involved
OCM,
TSP,
ATP
metabolism.
Strikingly,
be
recapitulated
simple
supplementation
metabolite
methionine
wild-type
animals.
Taken
together,
these
data
unearth
capacity
damaged
animals
highlight
therapeutic
possibilities
its
related
treatment
neuronal
medRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Янв. 7, 2025
One-carbon
metabolism
(OCM),
a
biochemical
pathway
dependent
on
micronutrients
including
folate
and
vitamin
B12,
plays
an
essential
role
in
aging-related
physiological
processes.
DNA
methylation-based
aging
biomarkers
may
be
influenced
by
OCM.
This
study
investigated
associations
of
OCM-related
with
epigenetic
the
National
Health
Nutrition
Examination
Survey
(NHANES).
Blood
methylation
was
measured
adults
aged
≥50
years
1999-2000
2001-2002
cycles
NHANES.
The
following
were
included:
Horvath1,
Horvath2,
Hannum,
PhenoAge,
GrimAge2,
DunedinPoAm,
telomere
length
(DNAmTL).
We
tested
for
serum
folate,
red
blood
cell
(RBC)
homocysteine,
methylmalonic
acid
concentrations
age
deviation
(EAD)
among
2,346
participants
nutritional
status
using
survey
weighted
general
linear
regression
models
adjusting
sociodemographics,
BMI,
behavioral
factors.
A
doubling
concentration
associated
-0.82
(95%
confidence
interval
(CI)
=
-1.40,
-0.23)
lower
GrimAge
EAD,
-0.13
SDs
(-0.22,
-0.03)
0.02
kb
(0.00,
0.04)
greater
DNAmTL
EAD.
Associations
attenuated
after
smoking
alcohol
intake,
antagonists.
Conversely,
homocysteine
1.05
(0.06,
2.04)
PhenoAge
1.93
(1.16,
2.71)
GrimAge2
0.26
(0.10,
0.41)
DunedinPoAm.
EAD
DunedinPoAm
robust
to
adjustment.
In
nationally
representative
sample
U.S.
adults,
carbon
donor,
indicator
OCM
deficiencies,
EAD;
however,
some
status.
Future
research
should
focus
high-risk
populations.
Randomized
controlled
trials
long-term
follow-up
are
also
needed
established
causality
investigate
clinical
relevance
changes
Nicotinamide
adenine
dinucleotide
kinase
(NADK)
is
essential
to
the
generation
of
nicotinamide
phosphate
(NADP(H)),
an
important
metabolic
coupling
factor
involved
in
glucose-stimulated
insulin
secretion.
In
present
study,
we
showed
that
expression
Nadk
and
Nadk2
transcripts
NADP(H)
content
were
lower
islets
80-week-old
(aged)
mice
than
those
8-week-old
(young)
mice.
This
was
associated
with
diminished
oral
glucose
tolerance
old
secretion
(GSIS)
response
islets.
Knockdown
(KD)
or
gene
NIT-1
cells
impaired
Metabolomic
analysis
revealed
KD
specifically
affected
purine
metabolism
cells.
The
levels
5-aminoimidazole-4-carboxamide
ribonucleotide
(AICAR)
higher
non-targeting
control
(NTC)
Phosphorylation
AMP-activated
protein
(AMPK)
elevated
glucose-treated
compared
NTC
Increased
AICAR
level
AMPKα
phosphorylation
observed
aged
Genetic
pharmacological
inhibition
AMPK
promoted
release
by
mouse
It
likely
NADK
modulatory
activation
pancreatic
β-cells
their
GSIS
response.
Enhanced
formation
accompanied
significantly
increased
conversion
from
inosine
monophosphate
(IMP)
a
tetrahydrofolate
(THF)-dependent
manner.
Folate
supplementation
augmented
Taken
together,
these
findings
suggest
aging-associated
decline
may
underlie
reduced
secretory
capacity
β-cells.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2025,
Номер
unknown
Опубликована: Март 11, 2025
Endogenous
pathogens
can
constrain
virulence
to
ensure
survival
in
the
host.
Pathogenic
state
be
controlled
by
metabolic
responses
prevailing
microenvironment;
however,
coupling
and
effector
mechanisms
are
not
well
understood.
Flux
through
One
Carbon
Metabolism
(OCM)
pathway
modulate
of
oral
pathobiont
Porphyromonas
gingivalis
,
here
we
show
that
this
is
tyrosine
phosphorylation-dependent
differential
partitioning
gingipain
proteases.
The
OCM
essential
precursor
pABA
inhibits
low
molecular
weight
phosphatase
Ltp1,
consequently
relieves
inhibition
its
cognate
kinase,
Ptk1.
We
found
absence
pABA,
reduced
Ptk1
kinase
activity
blocks
extracellular
release
gingipains.
Surface
retention
gingipains
confers
resistance
neutrophil
mobilization
killing,
animal
models
disease
elevated.
Reciprocally,
required
for
maximal
flux
OCM,
phosphorylate
enzymes
GlyA
GcvT.
Further,
ALP,
an
alkaline
involved
synthesis
DHPPP,
which
combines
with
make
DHP,
phosphorylated
activated
propose,
therefore,
although
primary
function
maintain
balance,
it
mechanistically
couples
metabolism
tunable
pathogenic
potential
directing
location
proteolytic
factors.
Microbiology and Molecular Biology Reviews,
Год журнала:
2025,
Номер
unknown
Опубликована: Апрель 2, 2025
SUMMARYIn
recent
years,
exhaustive
efforts
have
been
made
to
dissect
the
composition
of
gut-associated
microbial
communities
and
associated
interactions
with
their
human
host,
which
are
thought
play
a
crucial
role
in
host
development,
physiology,
metabolic
functions.
Although
such
studies
were
initially
focused
on
description
compositional
shifts
microbiota
that
occur
between
different
health
conditions,
more
recently,
they
provided
key
insights
into
functional
contributions
gut
overall
physiology.
In
this
context,
an
important
activity
is
believed
be
represented
by
synthesis
various
vitamins
may
elicit
considerable
benefits
health.
A
growing
body
scientific
literature
now
available
relating
(predicted)
bacterial
vitamin
biosynthetic
abilities,
ever-growing
information
concerning
prevalence
these
abilities
among
members
microbiota.
This
review
aimed
at
disentangling
if
how
cooperative
trophic
contribute
production,
such,
microbiota-mediated
production
varies
according
life
stages.
Moreover,
it
offers
brief
exploration
diets
influence
shaping
while
also
providing
preliminary
potential
correlations
microbiota-associated
occurrence
diseases
and/or
disorders.
Scientific Reports,
Год журнала:
2023,
Номер
13(1)
Опубликована: Май 26, 2023
Abstract
Metabolomics
has
proven
to
be
an
important
omics
approach
understand
the
molecular
pathways
underlying
tumour
phenotype
and
identify
new
clinically
useful
markers.
The
literature
on
cancer
illustrated
potential
of
this
as
a
diagnostic
prognostic
tool.
present
study
aimed
analyse
plasma
metabolic
profile
patients
with
oral
squamous
cell
carcinoma
(OSCC)
controls
compare
metastatic
primary
tumours
at
different
stages
subsites
using
nuclear
magnetic
resonance
mass
spectrometry.
To
our
knowledge,
is
only
report
that
compared
replicates
collected
in
diverse
institutions
times
these
methodologies.
Our
results
showed
OSCC
suggestive
abnormal
ketogenesis,
lipogenesis
energy
metabolism,
which
already
early
phases
but
more
evident
advanced
disease.
Reduced
levels
several
metabolites
were
also
associated
unfavorable
prognosis.
observed
metabolomic
alterations
may
contribute
inflammation,
immune
response
inhibition
growth,
explained
by
four
nonexclusive
views—differential
synthesis,
uptake,
release,
degradation
metabolites.
interpretation
assimilates
views
cross
talk
between
neoplastic
normal
cells
microenvironment
or
distant
anatomical
sites,
connected
biofluids,
signalling
molecules
vesicles.
Additional
population
samples
evaluate
details
processes
lead
discovery
biomarkers
novel
strategies
for
prevention
treatment.
Reviews in the Neurosciences,
Год журнала:
2023,
Номер
34(8), С. 915 - 932
Опубликована: Июль 6, 2023
The
transsulfuration
pathway
(TSP)
is
a
metabolic
involving
sulfur
transfer
from
homocysteine
to
cysteine.
Transsulfuration
leads
many
metabolites,
principally
glutathione,
H2S,
taurine,
and
Key
enzymes
of
the
TSP,
such
as
cystathionine
β-synthase
γ-lyase,
are
essential
regulators
at
multiple
levels
in
this
pathway.
TSP
metabolites
implicated
physiological
processes
central
nervous
system
other
tissues.
important
controlling
balance
optimal
cellular
functions
glutathione
synthesis.
Alterations
related
pathways
(transmethylation
remethylation)
altered
several
neurodegenerative
diseases,
including
Parkinson's
disease,
suggesting
their
participation
pathophysiology
progression
these
diseases.
In
disease
comprised
mainly
those
that
regulate
redox
homeostasis,
inflammation,
reticulum
endoplasmic
stress,
mitochondrial
function,
oxidative
content
involved
damage
processes.
Current
research
on
has
primarily
focused
synthesis
function
certain
particularly
glutathione.
However,
our
understanding
regulation
pathway,
well
relationships
with
Parkinson´s
remain
limited.
Thus,
paper
highlights
importance
studying
molecular
dynamics
different
affect
disease.