Persoonia - Molecular Phylogeny and Evolution of Fungi,
Год журнала:
2020,
Номер
45(1), С. 163 - 176
Опубликована: Март 18, 2020
The
genus
Calonectria
includes
many
important
plant
pathogens
with
a
wide
global
distribution.
In
order
to
better
understand
the
reproductive
biology
of
these
fungi,
we
characterised
structure
mating
type
locus
and
flanking
genes
using
genome
sequences
for
seven
species.
Primers
amplify
in
other
species
were
also
developed.
PCR
amplification
multi-gene
phylogenetic
analyses
used
investigate
strategies
evolution
collection
70
residing
10
complexes.
Results
showed
that
organisation
MAT
is
conserved.
heterothallic
species,
novel
gene,
MAT1-2-12
was
identified
MAT1-2
idiomorph;the
MAT1-1
idiomorph,
most
cases,
contained
MAT1-1-3
gene.
Neither
nor
found
homothallic
(
Ca
.)
hongkongensis
,
Ca.
lateralis
pseudoturangicola
turangicola
.
Four
different
gene
arrangements
observed.
Ancestral
state
reconstruction
analysis
provided
evidence
basal
this
evolved
from
ancestor.
Persoonia - Molecular Phylogeny and Evolution of Fungi,
Год журнала:
2021,
Номер
unknown
Опубликована: Янв. 1, 2021
The
Fusarium
fujikuroi
species
complex
(FFSC)
includes
more
than
60
phylogenetic
(phylospecies)
with
both
phytopathological
and
clinical
importance.
Because
of
their
economical
relevance,
a
stable
taxonomy
nomenclature
is
crucial
for
in
the
FFSC.
To
attain
this
goal,
we
examined
type
specimens
representative
cultures
several
by
employing
morphology
analyses
based
on
partial
gene
fragments
translation
elongation
factor
1-alpha
(tef1),
beta-tubulin
(tub2),
calmodulin
(cmdA),
RNA
polymerase
largest
subunit
(rpb1)
II
second
(rpb2).
Based
these
results
three
new
were
delimited
Two
phylospecies
clustered
within
African
clade,
one
American
clade.
Epitypes
also
designated
six
previously
described
FFSC
including
F.
proliferatum
verticillioides,
neotype
subglutinans.
Furthermore,
acutatum
ophioides,
which
invalidly
published,
are
validated.
Citation:
Yilmaz
N,
Sandoval-Denis
M,
Lombard
L,
et
al.
2021.
Redefining
limits
complex.
Persoonia
46:
129-162.
https://doi.org/10.3767/persoonia.2021.46.05.
Asian Journal of Mycology,
Год журнала:
2020,
Номер
3(1), С. 22 - 294
Опубликована: Янв. 1, 2020
This
paper
is
the
first
in
AJOM
series
which
we
report
100
new
collections
of
fungi
include
species,
host
and
country
records.In
all,
nine
90
records
one
combination
are
introduced.The
purpose
this
to
provide
an
outlet
for
publishing
with
sequence
data,
so
that
these
observations
will
not
be
wasted
mycologists
can
use
information
update
fungal
classification
better
identification
species.Previously,
numerous
species
were
described
from
collection
no
further
data
on
published
as
it
was
considered
low
impact.This
will,
therefore,
increase
knowledge
occurrence,
biogeography
variability
each
taxon
dealt
with.The
distribution
hosts
listed
added
if
backed
up
by
data.
Mycosphere,
Год журнала:
2023,
Номер
14(1), С. 1 - 106
Опубликована: Янв. 1, 2023
Astragalus
sinicus
and
Vicia
villosa;
are
frequently
applied
green
manure
plants
used
in
China.However,
there
is
poor
knowledge
of
the
fungal
endophytic
community
mycobiome
crops.Field
surveys
were
conducted
during
2017-2019
four
provinces
China.Asymptomatic
plant
parts
collected.Using
a
culture-dependent
method,
517
isolates
obtained
from
villosa.These
further
identified
using
combination
morphological
multi-loci
phylogenetic
analyses
differentiated
into
30
species
15
genera
ten
families
belonging
to
only
Ascomycota.Most
isolated
strains
belonged
Sordariomycetes.The
most
dominant
genus
was
Fusarium,
with
381
both
crops,
while
all
other
taxa
less
than
40
times.The
similarity
search
on
Fusarium
MLST
database
showed
370
seven
complexes
one
subclade.Eleven
could
not
be
assigned
any
complex.The
remaining
136
23
known
novel
species.A
total
178
Operational
Taxonomic
Units
(OTUs)
Illumina
analysis
mainly
classified
five
phyla
(Ascomycota,
Basidiomycota,
Chytridiomycota,
Cryptomycota,
Mucoromycota).Overall
OTUs
21
classes,
48
orders,
66
families,
74
genera.Based
overall
OTUs,
abundant
Alternaria
alternata,
which
also
method.Most
recorded
High
Throughput
Sequencing
(HTS)
approach
method
(Boeremia,
Cladosporium,
Filobasidium,
Magnoporthe,
Mucor,
Rhizoctonia,
Sporidiobolus).Functional
annotation
reveals
that
Ascomycetes
approaches
comprised
several
pathogenic
species.
Mycosphere,
Год журнала:
2023,
Номер
14(1), С. 2208 - 2262
Опубликована: Янв. 1, 2023
This
is
the
tenth
of
series
Mycosphere
Notes,
wherein
we
present
newly
discovered
saprobic
and
endophytic
fungi
isolated
from
various
hosts
in
China,
Thailand,
Uzbekistan.In
this
compilation,
introduce
three
new
genera,
viz.,
Conicotenuis
(Phomatosporaceae),
Irregularispora
(Stictidaceae)
Minimispora
14
species,
Clonostachys
artemisiae
(Bionectriaceae),
fusiformis
olivacea
(Stictidaceae),
Melomastia
loropetalicola
(Pleurotremataceae),
superficialis
Montagnula
agaves
(Didymosphaeriaceae),
Neodendryphiella
brassaiopsidis
(Dictyosporiaceae),
Paramicrosphaeropsis
sexualis
(Didymellaceae),
Pestalotiopsis
camelliae-japonicae
(Sporocadaceae),
pyrrosiaelinguae
zhaoqingensis
Pseudocoleophoma
heteropanacicola
Pseudopaucispora
heteropanacis
(Lophiostomataceae)
Torula
longan
(Torulaceae).In
addition,
two
species
phetchaburiensis
M.
sinensis
are
reviewed,
their
illustrations
provided
based
on
holotype.A
host
record
phytolaccae
described
Phytolacca
americana.We
describe
sexual
morph
for
first
time
revise
its
generic
concept
herein.
Mycosphere,
Год журнала:
2023,
Номер
14(1), С. 452 - 496
Опубликована: Янв. 1, 2023
Hymenochaetales
is
one
of
the
fungal
orders
being
mainly
composed
wood-inhabiting
macrofungi
within
Agaricomycetes,
Basidiomycota.While
species
diversity
has
been
well
explored,
classification
at
family
level
still
contrary
and
not
fully
resolved.In
this
study,
taxonomic
framework
updated
with
help
phylogenetic
molecular
clock
analyses
based
on
six
to
seven
gene
regions.Compared
previous
papers,
concepts
Hyphodontiaceae
Schizoporaceae
are
unchanged,
while
additional
families
emended:
circumscription
monotypic
Chaetoporellaceae
enlarged
by
including
Echinoporia
in
family;
a
larger
concept
Hymenochaetaceae
formally
proposed
accommodate
members
originally
Hymenochaetaceae,
Neoantrodiellaceae
Nigrofomitaceae,
genera
Basidioradulum
Trichaptum;
Repetobasidiaceae
Tubulicrinaceae
reinstated
as
two
families;
Rickenellaceae
reduced
be
name
Rigidoporaceae
resurrected
replace
its
later
synonym
Oxyporaceae.Besides
these
eight
previously
known
families,
Odonticiaceae
newly
erected
for
Leifia
Odonticium,
five
also
make
many
possible
accommodated
level.In
addition,
Botryodontia,
Neoantrodiella
Skvortzoviella
considered
synonyms
Rigidoporus,
Cyanotrama
Schizocorticium,
respectively,
sampled
from
three
current
accordingly
transferred.Eventually,
total
14
viz.Chaetoporellaceae,
Hyphodontiaceae,
Odonticiaceae,
Peniophorellaceae,
Repetobasidiaceae,
Resiniciaceae,
Rickenellaceae,
Rigidoporaceae,
Schizocorticiaceae,
Schizoporaceae,
Sideraceae,
Skvortzoviaceae
accommodating
64
genera,
19
independent
accepted
Hymenochaetales.In
conclusion,
more
natural
system
achieved,
which
crucial
basis
further
exploring
diversity,
resource
utilization
trait
evolution
order.
Mycosphere,
Год журнала:
2023,
Номер
14(1), С. 1835 - 1959
Опубликована: Янв. 1, 2023
Fungalpedia
is
an
online
illustrated
compendium
of
the
fungi
and
fungus-like
taxa.In
this
database
we
provide
notes
on
genera
higher
taxa
definitions
descriptions
terms
generally
used
in
mycology.Where
possible
are
enhanced
with
plates
drawings
to
make
easier
understand.In
case
genera,
1)
habit,
host
lifestyle,
2)
level
classification,
3)
genes
other
evidence
support
genus,
4)
main
characters,
5)
a
critical
assessment
genus
its
placement,
6)
photographic
and/or
characters
genus.For
give
similar
information
but
drawing
will
not
be
provided.For
various
explanations
diagrams
facilitate
understanding.We
also
accounts
eminent
mycologists
both
living
deceased.We
methodology
biotechnology.Although
many
entries
by
invited
authors
published
scientific
papers,
interested
persons
welcome
contribute
modify
existing
entries.Those
should
contact
lead
author.
Mycosphere,
Год журнала:
2019,
Номер
10(1), С. 655 - 700
Опубликована: Янв. 1, 2019
Chaetosphaeriaceae
is
a
genus-rich,
but
taxonomically
confused
family
and
there
need
of
more
detailed
studies
on
their
asexual
sexual
morphs
investigation
phylogenetic
relationships
to
similar
genera
in
other
families.In
this
study,
survey
hyaline-spored
chaetosphaeriaceous
hyphomycetes
yielded
ten
new
taxa,
including
one
genus
(Multiguttulispora)
nine
species
(Dictyochaeta
brevis,
D.
terminaliae,
Kionochaeta
castaneae,
K.
microspora,
Menisporopsis
breviseta,
M.
dushanensis,
Multiguttulispora
sympodialis,
Tainosphaeria
aseptata
T.
monophialidica).In
addition,
Cryptophiale
udagawae
Dictyochaeta
simplex
are
described
illustrated.Support
for
the
taxa
provided
by
morphological
comparison
DNA
sequence
data
analyses.Phylogenetic
analysis
SSU,
ITS
LSU
showed
that
polyphyletic
phylogenetically
located
two
groups
(Kionochaeta
1
2).In
synopsis
species,
an
updated
tree
outline
provided.
