Spatially explicit depiction of a floral epiphytic bacterial community reveals role for environmental filtering within petals DOI
Rebecca A. Hayes, María Rebolleda‐Gómez, Kristen Butela

и другие.

MicrobiologyOpen, Год журнала: 2021, Номер 10(1)

Опубликована: Фев. 1, 2021

The microbiome of flowers (anthosphere) is an understudied compartment the plant microbiome. Within flower, petals represent a heterogeneous environment for microbes in terms resources and environmental stress. Yet, little known drivers structure function epiphytic microbial community at within-petal scale. We characterized petal two co-flowering plants that differ pattern ultraviolet (UV) absorption along their petals. Bacterial communities were similar between hosts, with only rare phylogenetically distant species contributing to differences. epiphyte was highly culturable (75% families) lending confidence spatially explicit isolation characterization bacteria. In one host, UV length, these, there negative relationship growth rate position on petal, as well lower tolerance strains isolated from UV-absorbing base than reflecting tip. A not seen second host whose had uniform patterning length. Across strains, variation carbon usage chemical followed common phylogenetic patterns. This work highlights value explorations bacteria anthosphere.

Язык: Английский

Towards synthetic ecology: strategies for the optimization of microbial community functions DOI Creative Commons
Magdalena San Román,

Andrea Arrabal,

Belen Benitez‐Dominguez

и другие.

Frontiers in Synthetic Biology, Год журнала: 2025, Номер 3

Опубликована: Март 18, 2025

Microbial communities are able to carry out myriad functions of biotechnological interest, ranging from the degradation industrial waste synthesis valuable chemical products. Over past years, several strategies have emerged for design microbial and optimization their functions. Here we provide an accessible overview these strategies. We highlight how principles synthetic biology, originally devised engineering individual organisms sub-organismal units (e.g., enzymes), influenced development field ecology. With this, aim encourage readers critically evaluate insights biology should guide our approach community-level engineering.

Язык: Английский

Процитировано

0

Assembly of stool-derived bacterial communities follows “early-bird” resource utilization dynamics DOI
Andrés Aranda-Díaz, Lisa Willis, Taylor H. Nguyen

и другие.

Cell Systems, Год журнала: 2025, Номер unknown, С. 101240 - 101240

Опубликована: Март 1, 2025

Язык: Английский

Процитировано

0

Environmental connectivity controls diversity in soil microbial communities DOI Creative Commons
Manupriyam Dubey, Noushin Hadadi, Serge Pelet

и другие.

Communications Biology, Год журнала: 2021, Номер 4(1)

Опубликована: Апрель 22, 2021

Abstract Interspecific interactions are thought to govern the stability and functioning of microbial communities, but influence spatial environment its structural connectivity on potential such unfold remain largely unknown. Here we studied effects community growth diversity as a function environmental connectivity, where define degree habitat fragmentation preventing cells from living together. We quantitatively compared naturally-derived high soil in completely mixed liquid suspension (high connectivity) massively fragmented poorly connected (low connectivity). The low consisted homogenously-sized miniature agarose beads containing random single or paired founder cells. found that overall was same both environments, dramatically reduced global community-level environment. Experimental observations were supported by modeling. model predicts loss result negative interspecific becoming more dominant at small species numbers. Counterintuitively for environment, isolated genotypes less productive than genotype cell pairs, suggesting whole profited emerging positive interactions. Our work demonstrates importance natural which aids future efforts intervene restore composition achieve engineering biotechnological objectives.

Язык: Английский

Процитировано

24

Synthesizing microbial biodiversity DOI Creative Commons
Xin Sun,

Álvaro Sánchez

Current Opinion in Microbiology, Год журнала: 2023, Номер 75, С. 102348 - 102348

Опубликована: Июнь 21, 2023

The diversity of microbial ecosystems is linked to crucial ecological processes and functions. Despite its significance, the mechanisms responsible for initiation maintenance microbiome are still not fully understood. primary challenge lies in difficulty isolating, monitoring, manipulating complex interrelated that modulate communities their natural habitats. Synthetic ecology experiments provide a suitable alternative investigating behind biodiversity controlled laboratory settings, as environment can be systematically modularly manipulated by adding removing components. This enables testing hypotheses advancement predictive theories. In this review, we present an overview recent progress toward achieving goal.

Язык: Английский

Процитировано

10

Spatially explicit depiction of a floral epiphytic bacterial community reveals role for environmental filtering within petals DOI
Rebecca A. Hayes, María Rebolleda‐Gómez, Kristen Butela

и другие.

MicrobiologyOpen, Год журнала: 2021, Номер 10(1)

Опубликована: Фев. 1, 2021

The microbiome of flowers (anthosphere) is an understudied compartment the plant microbiome. Within flower, petals represent a heterogeneous environment for microbes in terms resources and environmental stress. Yet, little known drivers structure function epiphytic microbial community at within-petal scale. We characterized petal two co-flowering plants that differ pattern ultraviolet (UV) absorption along their petals. Bacterial communities were similar between hosts, with only rare phylogenetically distant species contributing to differences. epiphyte was highly culturable (75% families) lending confidence spatially explicit isolation characterization bacteria. In one host, UV length, these, there negative relationship growth rate position on petal, as well lower tolerance strains isolated from UV-absorbing base than reflecting tip. A not seen second host whose had uniform patterning length. Across strains, variation carbon usage chemical followed common phylogenetic patterns. This work highlights value explorations bacteria anthosphere.

Язык: Английский

Процитировано

21