bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2022,
Номер
unknown
Опубликована: Июль 28, 2022
Abstract
Microtubules
are
dynamic
polymers
that
undergo
stochastic
transitions
between
growing
and
shrinking
phases.
The
structural
chemical
properties
of
these
phases
remain
poorly
understood.
transition
from
growth
to
shrinkage,
termed
catastrophe,
is
not
a
first-order
reaction
but
rather
multi-step
process
whose
frequency
increases
with
the
time:
microtubule
ages
as
older
tip
becomes
more
unstable.
Aging
shows
phase
single
state
comprises
several
substates
increasing
instability.
To
investigate
whether
also
multi-state,
we
characterized
kinetics
shrinkage
following
catastrophe
using
an
in
vitro
reconstitution
assay
purified
tubulins.
We
found
speed
highly
variable
across
microtubules
individual
slows
down
over
time
by
much
fold.
slowdown
was
observed
both
fluorescently
labeled
unlabeled
well
polymerized
tubulin
different
species,
suggesting
general
property
microtubules.
These
results
indicate
like
time-dependent
passes
through
succession
states
stability.
hypothesize
due
destabilizing
events
took
place
during
which
led
catastrophe.
This
suggests
aging
associated
manifest
older,
unstable
being
faster
depolymerizing
tip.
Statement
Significance
dynamics
cytoskeleton
crucial
for
functions
eukaryotic
cells.
Microtubule
traditionally
described
constant
speeds
first
order
However,
age
process.
In
contrast
common
assumption
shrink
speed,
here
show
tips
step-wise
depolymerization.
Our
suggest
finding
important
understanding
molecular
nature
instability
how
can
be
modulated
proteins.
CLASPs
(cytoplasmic
linker-associated
proteins)
are
ubiquitous
stabilizers
of
microtubule
dynamics,
but
their
molecular
targets
at
the
plus-end
not
understood.
Using
DNA
origami-based
reconstructions,
we
show
that
clusters
human
CLASP2
form
a
load-bearing
bond
with
terminal
non-GTP
tubulins
stabilized
tip.
This
activity
relies
on
unconventional
TOG2
domain
CLASP2,
which
releases
its
high-affinity
dimers
upon
conversion
into
polymerization-competent
GTP-tubulins.
The
ability
to
recognize
nucleotide-specific
tubulin
conformation
and
stabilize
catastrophe-promoting
intertwines
previously
underappreciated
exchange
between
GDP
GTP
tubulins.
We
propose
TOG2-dependent
stabilization
sporadically
occurring
represents
distinct
mechanism
suppress
catastrophe
freely
assembling
ends
promote
persistent
assembly
tethered
ends,
such
as
kinetochores
in
dividing
cells.
Cell Reports,
Год журнала:
2024,
Номер
43(3), С. 113882 - 113882
Опубликована: Март 1, 2024
Numerous
viruses
alter
host
microtubule
(MT)
networks
during
infection,
but
how
and
why
they
induce
these
changes
is
unclear
in
many
cases.
We
show
that
the
vaccinia
virus
(VV)-encoded
A51R
protein
a
MT-associated
(MAP)
directly
binds
MTs
stabilizes
them
by
both
promoting
their
growth
preventing
depolymerization.
Furthermore,
we
demonstrate
A51R-MT
interactions
are
conserved
across
proteins
from
multiple
poxvirus
genera,
highly
conserved,
positively
charged
residues
mediate
interactions.
Strikingly,
find
encoding
MT
interaction-deficient
fail
to
suppress
reactive
oxygen
species
(ROS)-dependent
antiviral
response
macrophages
leads
block
virion
morphogenesis.
Moreover,
required
for
VV
virulence
mice.
Collectively,
our
data
poxviral
MAP-MT
overcome
cell-intrinsic
ROS
would
otherwise
morphogenesis
replication
animals.
Nature Communications,
Год журнала:
2025,
Номер
16(1)
Опубликована: Март 10, 2025
Abstract
A
critical
feature
of
microtubules
is
their
GTP
cap,
a
stabilizing
GTP-tubulin
rich
region
at
growing
microtubule
ends.
Microtubules
polymerized
in
the
presence
analogs
or
from
hydrolysis-deficient
tubulin
mutants
have
been
used
as
GTP-cap
mimics
for
structural
and
biochemical
studies.
However,
these
generate
with
diverse
properties
lattice
structures,
leaving
it
unclear
what
most
faithful
mimic
hence
structure
cap.
Here,
we
human
mutant,
αE254Q,
smallest
possible
modification.
We
show
that
αE254Q-microtubules
are
stable,
but
still
exhibit
mild
mutation-induced
growth
abnormalities.
mixing
two
mutants,
αE254Q
αE254N,
an
optimized
ratio
eliminates
abnormalities,
indicating
‘mosaic
microtubules’
cap
mimics.
Their
cryo-electron
microscopy
reveals
longitudinal
expansion,
not
protofilament
twist,
primary
distinguishing
containing
GDP-tubulin
shaft.
alterations
twist
may
be
transiently
needed
to
allow
compaction
hydrolysis.
Together,
our
results
provide
insights
into
origin
stability,
pathway
hydrolysis
dynamic
instability.
Cell Cycle,
Год журнала:
2025,
Номер
unknown, С. 1 - 20
Опубликована: Апрель 22, 2025
Microtubules
are
polymers
of
α/β
tubulin
dimers
that
build
the
mitotic
spindle,
which
segregates
duplicated
chromosomes
during
cell
division.
Microtubule
function
is
governed
by
dynamic
instability,
whereby
cycles
growth
and
shrinkage
contribute
to
forces
necessary
for
chromosome
movement.
Regulation
microtubule
velocity
requires
cycle-dependent
changes
in
expression,
localization
activity
microtubule-associated
proteins
(MAPs)
as
well
post-translational
modifications
modulate
dynamics.
It
has
become
clear
optimal
velocities
required
proper
segregation
ploidy
maintenance.
Suboptimal
rates
can
result
from
altered
MAPs
could
lead
aneuploidy,
possibly
disrupting
establishment
bundles
at
kinetochores
altering
mechanical
sister
chromatid
segregation.
Future
work
using
high-resolution,
low-phototoxicity
microscopy
novel
fluorescent
markers
will
be
invaluable
obtaining
deeper
mechanistic
insights
into
how
processes
Almost
40
years
since
the
discovery
of
microtubule
dynamic
instability,
molecular
mechanisms
underlying
dynamics
remain
an
area
intense
research
interest.
The
"standard
model"
implicates
a
"cap"
GTP-bound
tubulin
dimers
at
growing
end
as
main
determinant
stability.
Loss
GTP-cap
leads
to
"catastrophe,"
switch-like
transition
from
growth
shrinkage.
However,
recent
studies,
using
biochemical
in
vitro
reconstitution,
cryo-EM,
and
computational
modeling
approaches,
challenge
simple
model.
Instead,
new
perspective
on
is
emerging.
In
this
view,
highly
transitions
between
different
structural
conformations
-
which
may
or
not
be
directly
linked
nucleotide
content
ultimately
drive
catastrophe.
The Journal of Cell Biology,
Год журнала:
2023,
Номер
222(7)
Опубликована: Май 15, 2023
Cytoplasmic
linker-associated
proteins
(CLASPs)
regulate
microtubules
in
fundamental
cellular
processes.
CLASPs
stabilize
dynamic
by
suppressing
microtubule
catastrophe
and
promoting
rescue,
the
switch-like
transitions
between
growth
shrinkage.
How
specifically
modulate
is
not
understood.
Here,
we
investigate
effects
of
on
pre-catastrophe
intermediate
state
dynamics,
employing
distinct
substrates
to
mimic
state.
Surprisingly,
find
that
CLASP1
promotes
depolymerization
stabilized
presence
GTP,
but
absence
nucleotide.
This
activity
also
observed
for
CLASP2
family
members
a
minimal
TOG2-domain
construct.
Conversely,
stabilizes
unstable
upon
tubulin
dilution
GTP.
Strikingly,
our
results
reveal
drives
with
vastly
different
inherent
stabilities
into
same
slowly
depolymerizing
nucleotide-dependent
manner.
We
interpret
this
as
Therefore,
conclude
suppress
stabilizing
Biophysical Journal,
Год журнала:
2023,
Номер
122(4), С. 616 - 623
Опубликована: Янв. 19, 2023
Microtubules
are
dynamic
polymers
that
undergo
stochastic
transitions
between
growing
and
shrinking
phases.
The
structural
chemical
properties
of
these
phases
remain
poorly
understood.
transition
from
growth
to
shrinkage,
termed
catastrophe,
is
not
a
first-order
reaction
but
rather
multistep
process
whose
frequency
increases
with
the
time:
microtubule
ages
as
older
tip
becomes
more
unstable.
Aging
shows
phase
single
state
comprises
several
substates
increasing
instability.
To
investigate
whether
also
multistate,
we
characterized
kinetics
shrinkage
following
catastrophe
using
an
in
vitro
reconstitution
assay
purified
tubulins.
We
found
speed
highly
variable
across
microtubules
individual
slows
down
over
time
by
much
fold.
slowdown
was
observed
both
fluorescently
labeled
unlabeled
well
polymerized
tubulin
different
species,
suggesting
general
property
microtubules.
These
results
indicate
like
dependent
passes
through
succession
states
stability.
hypothesize
due
destabilizing
events
took
place
during
growth,
which
led
catastrophe.
This
suggests
aging
associated
manifested
older,
unstable
being
faster
depolymerizing
tip.
Proceedings of the National Academy of Sciences,
Год журнала:
2022,
Номер
119(46)
Опубликована: Ноя. 7, 2022
Microtubules
are
essential
cytoskeletal
polymers
that
exhibit
stochastic
switches
between
tubulin
assembly
and
disassembly.
Here,
we
examine
possible
mechanisms
for
these
switches,
called
catastrophes
rescues.
We
formulate
a
four-state
Monte
Carlo
model,
explicitly
considering
two
biochemical
conformational
states
of
tubulin,
based
on
recently
conceived
view
microtubule
with
flared
ends.
The
model
predicts
high
activation
energy
barriers
lateral
interactions
can
cause
lagging
curled
protofilaments,
leading
to
ragged
appearance
the
growing
tip.
Changes
in
extent
tip
raggedness
explain
some
important
but
poorly
understood
features
catastrophe:
weak
dependence
concentration
an
increase
its
probability
over
time,
known
as
aging.
vanishingly
rare
frequency
spontaneous
rescue
unless
patches
guanosine
triphosphate
artificially
embedded
into
lattice.
To
test
our
used
vitro
reconstitution,
designed
minimize
artifacts
induced
by
interaction
nearby
surfaces.
were
assembled
from
seeds
overhanging
microfabricated
pedestals
thus
well
separated
coverslip.
This
geometry
reduced
incorporation
tubulins
shaft
compared
conventional
assay,
producing
data
consistent
model.
Moreover,
positions
microtubules
nucleated
coverslip-immobilized
displayed
nonexponential
distribution,
confirming
coverslips
affect
dynamics.
Overall,
study
establishes
unified
theory
accounting
ends,
structure–dependent
catastrophe
frequency,
dependent
lattice
damage
repair.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2022,
Номер
unknown
Опубликована: Дек. 4, 2022
ABSTRACT
CLASPs
regulate
microtubules
in
many
fundamental
cellular
processes.
stabilize
dynamic
by
suppressing
catastrophe
and
promoting
rescue,
the
switch-like
transitions
between
microtubule
growth
shrinkage.
However,
molecular
mechanisms
underlying
CLASP’s
activity
are
not
understood.
Here,
we
investigate
effects
of
on
distinct
substrates
absence
tubulin
to
gain
insight
into
how
dynamics.
Surprisingly,
find
that
human
CLASP1
depolymerizes
stable
presence
GTP,
but
nucleotide.
Conversely,
stabilizes
upon
dilution
GTP.
Our
results
demonstrate
drives
with
different
inherent
stabilities
same
slowly-depolymerizing
state
a
nucleotide-dependent
manner.
We
interpret
this
as
pre-catastrophe
intermediate
Thus,
conclude
shrinkage
suppress
promote
rescue.