CRISPR/Cas-based Aptasensor as an Innovative Sensing Approaches for Food Safety Analysis: Recent Progresses and New Horizons DOI

Marwah Suliman Maashi

Critical Reviews in Analytical Chemistry, Год журнала: 2023, Номер 54(7), С. 2599 - 2617

Опубликована: Март 20, 2023

Food safety is one of the greatest public problems occurring around world. Chemical, physical, and microbiological hazards could lead to food problems, which might occur at all stages supply chain. To tackle protect consumer health, specific, accurate, rapid diagnosis techniques meeting various requirements are imperative measures ensure safety. CRISPR-Cas system, a novel emerging technology, effectively repurposed in (bio)sensing has shown tremendous capability develop on-site portable diagnostic methods with high specificity sensitivity. Among numerous existing CRISPR/Cas systems, CRISPR/Cas13a CRISPR/Cas12a extensively employed design biosensors, owing their ability cleave both non-target target sequences. However, limitation hindered its progress. Nowadays, nucleic acid aptamers recognized for high-affinity characteristics analytes incorporated into systems. With benefits reproducibility, durability, portability, facile operation, cost-effectiveness, CRISPR/Cas-based aptasensing approaches an ideal choice fabricating highly specific point-of-need analytical tools enhanced response signals. In current study, we explore some most recent progress CRISPR/Cas-mediated aptasensors detecting risk factors including veterinary drugs, pesticide residues, pathogens, mycotoxins, heavy metals, illegal additives, other contaminants. The nanomaterial engineering support also signified achieve hopeful perspective provide new straightforward test kits toward trace amounts different contaminants encountered samples.

Язык: Английский

Amplification-free CRISPR/Cas detection technology: challenges, strategies, and perspectives DOI
Huimin Li, Yi Xie, Fumin Chen

и другие.

Chemical Society Reviews, Год журнала: 2022, Номер 52(1), С. 361 - 382

Опубликована: Дек. 19, 2022

This review summarizes the recent advances and main strategies to improve sensitivity of amplification-free CRISPR/Cas-based detection techniques.

Язык: Английский

Процитировано

168

CRISPR‐Cas Biochemistry and CRISPR‐Based Molecular Diagnostics DOI Open Access

Zhengyan Weng,

Zheng You, Jie Yang

и другие.

Angewandte Chemie International Edition, Год журнала: 2023, Номер 62(17)

Опубликована: Янв. 30, 2023

Abstract Polymerase chain reaction (PCR)‐based nucleic acid testing has played a critical role in disease diagnostics, pathogen surveillance, and many more. However, this method requires long turnaround time, expensive equipment, trained personnel, limiting its widespread availability diagnostic capacity. On the other hand, clustered regularly interspaced short palindromic repeats (CRISPR) technology recently demonstrated capability for detection with high sensitivity specificity. CRISPR‐mediated biosensing holds great promise revolutionizing procedures developing point‐of‐care diagnostics. This review focuses on recent developments both fundamental CRISPR biochemistry CRISPR‐based techniques. Four ongoing research hotspots molecular diagnostics‐target preamplification‐free detection, microRNA (miRNA) testing, non‐nucleic‐acid SARS‐CoV‐2 detection‐are also covered.

Язык: Английский

Процитировано

110

CRISPR‐Cas‐based detection for food safety problems: Current status, challenges, and opportunities DOI
Yaru Li, Shuli Man,

Shengying Ye

и другие.

Comprehensive Reviews in Food Science and Food Safety, Год журнала: 2022, Номер 21(4), С. 3770 - 3798

Опубликована: Июль 1, 2022

Abstract Food safety is one of the biggest public issues occurring around world. Microbiological, chemical, and physical hazards can lead to food issues, which may occur at all stages supply chain. In order tackle safeguard consumer health, rapid, accurate, specific, field‐deployable detection methods meeting diverse requirements are imperative measures for assurance. CRISPR‐Cas system, a newly emerging technology, has been successfully repurposed in biosensing demonstrated huge potential establish conceptually novel with high sensitivity specificity. This review focuses on CRISPR‐Cas–based its current status specifically inspection. We firstly illustrate pending problems summarize popular methods. then describe applications Finally, challenges futuristic opportunities proposed discussed. Generally speaking, still unsatisfactory some ways such as being time‐consuming, displaying unmet specificity standards, there comparative paucity multiplexed testing POCT. Recent studies have shown that an innovative fast‐expanding could make up shortcomings existing or even replace them. To sum up, implementation integration other techniques promising desirable, expected provide “customized” “smart” inspection coming future.

Язык: Английский

Процитировано

105

Programmable RNA detection with CRISPR-Cas12a DOI Creative Commons
Santosh R. Rananaware, Emma K. Vesco, Grace M. Shoemaker

и другие.

Nature Communications, Год журнала: 2023, Номер 14(1)

Опубликована: Сен. 5, 2023

Abstract Cas12a, a CRISPR-associated protein complex, has an inherent ability to cleave DNA substrates and is utilized in diagnostic tools identify molecules. We demonstrate that multiple orthologs of Cas12a activate trans-cleavage the presence split activators. Specifically, PAM-distal region crRNA recognizes RNA targets provided PAM-proximal seed target. Our method, Split Activator for Highly Accessible Analysis (SAHARA), detects picomolar concentrations without sample amplification, reverse-transcription, or strand-displacement by simply supplying short sequence complementary region. Beyond detection, SAHARA outperforms wild-type CRISPR-Cas12a specificity towards point-mutations can detect pooled crRNA/Cas12a arrays via distinct DNAs. In conclusion, simple, yet powerful nucleic acid detection platform based on be applied multiplexed fashion potentially expanded other CRISPR-Cas enzymes.

Язык: Английский

Процитировано

99

A SERS-signalled, CRISPR/Cas-powered bioassay for amplification-free and anti-interference detection of SARS-CoV-2 in foods and environmental samples using a single tube-in-tube vessel DOI Open Access
Long Ma, Wenlu Zhang, Lijuan Yin

и другие.

Journal of Hazardous Materials, Год журнала: 2023, Номер 452, С. 131195 - 131195

Опубликована: Март 11, 2023

Язык: Английский

Процитировано

62

CRISPR-Microfluidics Nexus: Advancing Biomedical Applications for Understanding and Detection DOI Creative Commons

ZahraSadat Razavi,

M. Soltani, Hamidreza Pazoki‐Toroudi

и другие.

Sensors and Actuators A Physical, Год журнала: 2024, Номер 376, С. 115625 - 115625

Опубликована: Июнь 24, 2024

The integration of CRISPR technology with microfluidic-based biosensors has greatly expanded its applications in medicine and molecular biology. This combination offers enhanced sensitivity selectivity medical diagnostics. CRISPR-powered microfluidics enables the accurate quantification DNA RNA associated diseases such as cancer, viral infections, bacterial diseases. precise targeting capabilities allow for detection specific genetic sequences, aiding early diagnosis, disease monitoring, treatment assessment. improves specificity by leveraging programmable nature coupling it signal readouts. However, challenges assay optimization, standardization, device fabrication need to be addressed. Additionally, complexity presents potential limitations terms off-target effects unintended modifications. Overall, holds tremendous diagnostics, but further research development are required fully exploit benefits clinical settings.

Язык: Английский

Процитировано

21

Microfluidics-based strategies for molecular diagnostics of infectious diseases DOI Creative Commons
Xin Wang,

Xianzhe Hong,

Yiwei Li

и другие.

Military Medical Research, Год журнала: 2022, Номер 9(1)

Опубликована: Март 18, 2022

Abstract Traditional diagnostic strategies for infectious disease detection require benchtop instruments that are inappropriate point-of-care testing (POCT). Emerging microfluidics, a highly miniaturized, automatic, and integrated technology, potential substitute traditional methods in performing rapid, low-cost, accurate, on-site diagnoses. Molecular diagnostics widely used microfluidic devices as the most effective approaches pathogen detection. This review summarizes latest advances microfluidics-based molecular diseases from academic perspectives industrial outlooks. First, we introduce typical on-chip nucleic acid processes, including sample preprocessing, amplification, signal read-out. Then, four categories of platforms compared with respect to features, merits, demerits. We further discuss application digital assay absolute quantification. Both classic recent commercial summarized proof current market status. Finally, propose future directions diagnosis.

Язык: Английский

Процитировано

71

SARS‐CoV‐2 RNA Detection by a Cellphone‐Based Amplification‐Free System with CRISPR/CAS‐Dependent Enzymatic (CASCADE) Assay DOI Open Access
Filipe S. R. Silva, Eda Erdogmus,

Ahmed Shokr

и другие.

Advanced Materials Technologies, Год журнала: 2021, Номер 6(12)

Опубликована: Июль 19, 2021

CRISPR (Clustered regularly interspaced short palindromic repeats)-based diagnostic technologies have emerged as a promising alternative to accelerate delivery of SARS-CoV-2 molecular detection at the point need. However, efficient translation CRISPR-diagnostic field application is still hampered by dependence on target amplification and reliance fluorescence-based results readout. Herein, an amplification-free CRISPR/Cas12a-based technology for RNA presented using smartphone camera This method, termed Cellphone-based system with CRISPR/CAS-dependent enzymatic (CASCADE) assay, relies mobile phone imaging catalase-generated gas bubble signal within microfluidic channel does not require any external hardware optical attachments. Upon specific reverse-transcribed DNA/RNA heteroduplex (orf1ab) ribonucleoprotein complex, transcleavage collateral activity Cas12a protein Catalase:ssDNA probe triggers system. High analytical sensitivity in without previous (down 50 copies µL

Язык: Английский

Процитировано

60

CRISPR/Cas-Powered Amplification-Free Detection of Nucleic Acids: Current State of the Art, Challenges, and Futuristic Perspectives DOI
Yaru Li, Yajie Liu, Xiaoqin Tang

и другие.

ACS Sensors, Год журнала: 2023, Номер 8(12), С. 4420 - 4441

Опубликована: Ноя. 18, 2023

CRISPR/Cas system is becoming an increasingly influential technology that has been repositioned in nucleic acid detection. A preamplification step usually required to improve the sensitivity of CRISPR/Cas-based The striking biological features CRISPR/Cas, including programmability, high and sequence specificity, single-base resolution. More strikingly, target-activated trans-cleavage could act as a biocatalytic signal transductor amplifier, thereby empowering it potentially perform detection without step. reports such work are on rise, which not only scientifically significant but also promising for futuristic end-user applications. This review started with introduction methods acids diagnostics (CRISPR-Dx). Next, we objectively discussed pros cons steps CRISPR-Dx. We then illustrated highlighted recently developed strategies CRISPR/Cas-powered amplification-free can be realized through uses ultralocalized reactors, cascade reactions, ultrasensitive systems, or others. Lastly, challenges perspectives were proposed. It expected this makes researchers better understand current emerging field, provides insight designing novel CRISPR-Dx win practicable use near future.

Язык: Английский

Процитировано

41

CRISPR-powered biosensing platform for quantitative detection of alpha-fetoprotein by a personal glucose meter DOI Creative Commons

Zhengyang Jia,

Ziyue Li, Changchun Liu

и другие.

Sensors and Actuators B Chemical, Год журнала: 2023, Номер 390, С. 133994 - 133994

Опубликована: Май 18, 2023

Язык: Английский

Процитировано

28